RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 PRDX5P30044 214 aa27.51■■□□□ 1.99
HDDC3-203ENST00000494993 CAP1Q01518 475 aa27.51■■□□□ 1.99
HDDC3-203ENST00000494993 PRPF38BQ5VTL8 546 aaKnown RBP27.51■■□□□ 1.99
HDDC3-203ENST00000494993 INTS3Q68E01 1043 aaKnown RBP27.51■■□□□ 1.99
HDDC3-203ENST00000494993 FAM43AQ8N2R8 423 aa27.51■■□□□ 1.99
HDDC3-203ENST00000494993 GNL3LQ9NVN8 582 aaKnown RBP27.51■■□□□ 1.99
HDDC3-203ENST00000494993 DOCK2Q92608 1830 aa27.51■■□□□ 1.99
HDDC3-203ENST00000494993 IL15P40933 162 aaPredicted RBP27.5■■□□□ 1.99
HDDC3-203ENST00000494993 DIXDC1Q155Q3 683 aa27.5■■□□□ 1.99
HDDC3-203ENST00000494993 FAM151AQ8WW52 585 aa27.5■■□□□ 1.99
HDDC3-203ENST00000494993 ZNF341Q9BYN7 854 aa27.5■■□□□ 1.99
HDDC3-203ENST00000494993 ZSWIM8A7E2V4 1837 aa27.5■■□□□ 1.99
HDDC3-203ENST00000494993 CETPP11597 493 aa27.49■■□□□ 1.99
HDDC3-203ENST00000494993 PA2G4Q9UQ80 394 aaKnown RBP27.49■■□□□ 1.99
HDDC3-203ENST00000494993 SALL1Q9NSC2 1324 aa27.48■■□□□ 1.99
HDDC3-203ENST00000494993 LDHBP07195 334 aaKnown RBP27.48■■□□□ 1.99
HDDC3-203ENST00000494993 PHKA1P46020 1223 aa27.48■■□□□ 1.99
HDDC3-203ENST00000494993 PPIL2Q13356 520 aa27.48■■□□□ 1.99
HDDC3-203ENST00000494993 CDC42EP5Q6NZY7 148 aa27.48■■□□□ 1.99
HDDC3-203ENST00000494993 MEIS3Q99687 375 aa27.48■■□□□ 1.99
HDDC3-203ENST00000494993 COPRSQ9NQ92 184 aa27.48■■□□□ 1.99
HDDC3-203ENST00000494993 DENND2AQ9ULE3 1009 aa27.48■■□□□ 1.99
HDDC3-203ENST00000494993 IRF6O14896 467 aa27.47■■□□□ 1.99
HDDC3-203ENST00000494993 SEMA3EO15041 775 aa27.47■■□□□ 1.99
HDDC3-203ENST00000494993 SNAPC2Q13487 334 aa27.47■■□□□ 1.99
HDDC3-203ENST00000494993 MIGA2Q7L4E1 593 aa27.47■■□□□ 1.99
HDDC3-203ENST00000494993 ZCCHC17Q9NP64 241 aaKnown RBP27.47■■□□□ 1.99
HDDC3-203ENST00000494993 RARSP54136 660 aaKnown RBP27.46■■□□□ 1.99
HDDC3-203ENST00000494993 TCP10Q12799 353 aa27.46■■□□□ 1.99
HDDC3-203ENST00000494993 ARMC5Q96C12 935 aa27.46■■□□□ 1.99
HDDC3-203ENST00000494993 POTEFA5A3E0 1075 aa27.45■■□□□ 1.98
HDDC3-203ENST00000494993 BTBD19C9JJ37 291 aa27.45■■□□□ 1.98
HDDC3-203ENST00000494993 ZBTB22O15209 634 aa27.45■■□□□ 1.98
HDDC3-203ENST00000494993 WDHD1O75717 1129 aaPredicted RBP27.45■■□□□ 1.98
HDDC3-203ENST00000494993 INPP5BP32019 993 aa27.45■■□□□ 1.98
HDDC3-203ENST00000494993 PPATQ06203 517 aa27.45■■□□□ 1.98
HDDC3-203ENST00000494993 NFIAQ12857 509 aa27.45■■□□□ 1.98
HDDC3-203ENST00000494993 ARHGEF6Q15052 776 aa27.45■■□□□ 1.98
HDDC3-203ENST00000494993 CCER2I3L3R5 266 aa27.44■■□□□ 1.98
HDDC3-203ENST00000494993 ADORA1P30542 326 aa27.44■■□□□ 1.98
HDDC3-203ENST00000494993 ARHGAP45Q92619 1136 aa27.44■■□□□ 1.98
HDDC3-203ENST00000494993 ZNF112Q9UJU3 913 aa27.44■■□□□ 1.98
HDDC3-203ENST00000494993 TLR2O60603 784 aa27.43■■□□□ 1.98
HDDC3-203ENST00000494993 CCDC102BQ68D86 513 aa27.43■■□□□ 1.98
HDDC3-203ENST00000494993 USP40Q9NVE5 1235 aa27.43■■□□□ 1.98
HDDC3-203ENST00000494993 FAM198AQ9UFP1 575 aa27.43■■□□□ 1.98
HDDC3-203ENST00000494993 BRCA2P51587 3418 aa27.41■■□□□ 1.98
HDDC3-203ENST00000494993 MKI67P46013 3256 aaKnown RBP27.41■■□□□ 1.98
HDDC3-203ENST00000494993 GNAI3P08754 354 aa27.41■■□□□ 1.98
HDDC3-203ENST00000494993 ZGPATQ8N5A5 531 aaKnown RBP27.41■■□□□ 1.98
HDDC3-203ENST00000494993 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.4■■□□□ 1.98
HDDC3-203ENST00000494993 PTCH2Q9Y6C5 1203 aa27.4■■□□□ 1.98
HDDC3-203ENST00000494993 PDS5AQ29RF7 1337 aaKnown RBP27.4■■□□□ 1.98
HDDC3-203ENST00000494993 SRGAP3O43295 1099 aa27.39■■□□□ 1.98
HDDC3-203ENST00000494993 TIMM10P62072 90 aa27.39■■□□□ 1.98
HDDC3-203ENST00000494993 RASGRF1Q13972 1273 aa27.39■■□□□ 1.98
HDDC3-203ENST00000494993 NOL9Q5SY16 702 aaKnown RBP27.39■■□□□ 1.98
HDDC3-203ENST00000494993 KCNH4Q9UQ05 1017 aa27.39■■□□□ 1.98
HDDC3-203ENST00000494993 PTPRFP10586 1907 aa27.39■■□□□ 1.97
HDDC3-203ENST00000494993 GAKO14976 1311 aa27.39■■□□□ 1.97
HDDC3-203ENST00000494993 LACTBP83111 547 aaPredicted RBP27.38■■□□□ 1.97
HDDC3-203ENST00000494993 MTX1Q13505 466 aa27.38■■□□□ 1.97
HDDC3-203ENST00000494993 ZFPM1Q8IX07 1006 aa27.38■■□□□ 1.97
HDDC3-203ENST00000494993 ZNF333Q96JL9 665 aa27.38■■□□□ 1.97
HDDC3-203ENST00000494993 IDI2Q9BXS1 227 aa27.38■■□□□ 1.97
HDDC3-203ENST00000494993 RFX7Q2KHR2 1363 aa27.37■■□□□ 1.97
HDDC3-203ENST00000494993 ATRNL1Q5VV63 1379 aa27.37■■□□□ 1.97
HDDC3-203ENST00000494993 A0A1B0GUL7 405 aa27.37■■□□□ 1.97
HDDC3-203ENST00000494993 DOCK1Q14185 1865 aa27.37■■□□□ 1.97
HDDC3-203ENST00000494993 KIF22Q14807 665 aa27.37■■□□□ 1.97
HDDC3-203ENST00000494993 SLC9C1Q4G0N8 1177 aa27.37■■□□□ 1.97
HDDC3-203ENST00000494993 ANKRD23Q86SG2 305 aa27.37■■□□□ 1.97
HDDC3-203ENST00000494993 DZIP1Q86YF9 867 aaKnown RBP27.37■■□□□ 1.97
HDDC3-203ENST00000494993 ARHGAP39Q9C0H5 1083 aa27.37■■□□□ 1.97
HDDC3-203ENST00000494993 AKAP2Q9Y2D5 859 aa27.37■■□□□ 1.97
HDDC3-203ENST00000494993 MGAMO43451 1857 aa27.36■■□□□ 1.97
HDDC3-203ENST00000494993 RGS3P49796 1198 aa27.36■■□□□ 1.97
HDDC3-203ENST00000494993 TFCP2Q12800 502 aa27.36■■□□□ 1.97
HDDC3-203ENST00000494993 NBPF11Q86T75 865 aa27.36■■□□□ 1.97
HDDC3-203ENST00000494993 XAGE2Q96GT9 111 aa27.36■■□□□ 1.97
HDDC3-203ENST00000494993 ABCF2Q9UG63 623 aa27.36■■□□□ 1.97
HDDC3-203ENST00000494993 PHIPQ8WWQ0 1821 aa27.36■■□□□ 1.97
HDDC3-203ENST00000494993 ENTPD3O75355 529 aa27.35■■□□□ 1.97
HDDC3-203ENST00000494993 EN2P19622 333 aaPredicted RBP27.35■■□□□ 1.97
HDDC3-203ENST00000494993 SLF2Q8IX21 1173 aa27.35■■□□□ 1.97
HDDC3-203ENST00000494993 MVPQ14764 893 aaKnown RBP27.34■■□□□ 1.97
HDDC3-203ENST00000494993 SPTY2D1Q68D10 685 aaPredicted RBP27.34■■□□□ 1.97
HDDC3-203ENST00000494993 C17orf99Q6UX52 265 aa27.34■■□□□ 1.97
HDDC3-203ENST00000494993 FAM163AQ96GL9 167 aaPredicted RBP27.34■■□□□ 1.97
HDDC3-203ENST00000494993 TMEM106CQ9BVX2 250 aa27.34■■□□□ 1.97
HDDC3-203ENST00000494993 PDHXO00330 501 aa27.33■■□□□ 1.97
HDDC3-203ENST00000494993 IPO8O15397 1037 aaKnown RBP27.33■■□□□ 1.97
HDDC3-203ENST00000494993 GNRH1P01148 92 aa27.33■■□□□ 1.97
HDDC3-203ENST00000494993 MOGSQ13724 837 aa27.33■■□□□ 1.97
HDDC3-203ENST00000494993 PHF20L1A8MW92 1017 aa27.32■■□□□ 1.96
HDDC3-203ENST00000494993 TRIM27P14373 513 aa27.32■■□□□ 1.96
HDDC3-203ENST00000494993 SH3BP5LQ7L8J4 393 aa27.32■■□□□ 1.96
HDDC3-203ENST00000494993 CPA4Q9UI42 421 aa27.32■■□□□ 1.96
HDDC3-203ENST00000494993 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.32■■□□□ 1.96
HDDC3-203ENST00000494993 ADGRA2Q96PE1 1338 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms