RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 USP2O75604 605 aaPredicted RBP16.23■□□□□ 0.19
ERCC3-209ENST00000494464 ZBTB48P10074 688 aaPredicted RBP16.23■□□□□ 0.19
ERCC3-209ENST00000494464 SREBF2Q12772 1141 aa16.23■□□□□ 0.19
ERCC3-209ENST00000494464 TNNI3KQ59H18 835 aa16.23■□□□□ 0.19
ERCC3-209ENST00000494464 GORABQ5T7V8 394 aa16.23■□□□□ 0.19
ERCC3-209ENST00000494464 SPTY2D1Q68D10 685 aaPredicted RBP16.23■□□□□ 0.19
ERCC3-209ENST00000494464 ANKRD13AQ8IZ07 590 aa16.23■□□□□ 0.19
ERCC3-209ENST00000494464 FPGT-TNNI3KV9GXZ4 949 aa16.23■□□□□ 0.19
ERCC3-209ENST00000494464 RFX7Q2KHR2 1363 aa16.23■□□□□ 0.19
ERCC3-209ENST00000494464 UQCRFS1P1P0C7P4 283 aa16.22■□□□□ 0.19
ERCC3-209ENST00000494464 TM4SF4P48230 202 aa16.22■□□□□ 0.19
ERCC3-209ENST00000494464 CDC42EP5Q6NZY7 148 aa16.22■□□□□ 0.19
ERCC3-209ENST00000494464 DZIP1Q86YF9 867 aaKnown RBP16.22■□□□□ 0.19
ERCC3-209ENST00000494464 SLF2Q8IX21 1173 aa16.22■□□□□ 0.19
ERCC3-209ENST00000494464 SPATA5Q8NB90 893 aa16.22■□□□□ 0.19
ERCC3-209ENST00000494464 HOOK2Q96ED9 719 aa16.22■□□□□ 0.19
ERCC3-209ENST00000494464 WNK4Q96J92 1243 aa16.22■□□□□ 0.19
ERCC3-209ENST00000494464 CLMNQ96JQ2 1002 aa16.22■□□□□ 0.19
ERCC3-209ENST00000494464 HMG20BQ9P0W2 317 aa16.22■□□□□ 0.19
ERCC3-209ENST00000494464 CASP8AP2Q9UKL3 1982 aa16.21■□□□□ 0.19
ERCC3-209ENST00000494464 TRPA1O75762 1119 aa16.21■□□□□ 0.19
ERCC3-209ENST00000494464 SLC10A4Q96EP9 437 aa16.21■□□□□ 0.19
ERCC3-209ENST00000494464 FAM163AQ96GL9 167 aaPredicted RBP16.21■□□□□ 0.19
ERCC3-209ENST00000494464 CHMP4BQ9H444 224 aaKnown RBP16.21■□□□□ 0.19
ERCC3-209ENST00000494464 ABCF2Q9UG63 623 aa16.21■□□□□ 0.19
ERCC3-209ENST00000494464 MANSC4A6NHS7 340 aaPredicted RBP16.2■□□□□ 0.18
ERCC3-209ENST00000494464 MCAMP43121 646 aa16.2■□□□□ 0.18
ERCC3-209ENST00000494464 MKRN3Q13064 507 aaKnown RBP16.2■□□□□ 0.18
ERCC3-209ENST00000494464 PDE3AQ14432 1141 aa16.2■□□□□ 0.18
ERCC3-209ENST00000494464 PI16Q6UXB8 463 aa16.2■□□□□ 0.18
ERCC3-209ENST00000494464 ERICH6Q7L0X2 663 aa16.2■□□□□ 0.18
ERCC3-209ENST00000494464 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.2■□□□□ 0.18
ERCC3-209ENST00000494464 FAM151AQ8WW52 585 aa16.2■□□□□ 0.18
ERCC3-209ENST00000494464 ZNF512BQ96KM6 892 aaPredicted RBP16.2■□□□□ 0.18
ERCC3-209ENST00000494464 ZBTB40Q9NUA8 1239 aa16.2■□□□□ 0.18
ERCC3-209ENST00000494464 COG6Q9Y2V7 657 aa16.2■□□□□ 0.18
ERCC3-209ENST00000494464 MROH7-TTC4A0A0A0MT08 1334 aa16.19■□□□□ 0.18
ERCC3-209ENST00000494464 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.19■□□□□ 0.18
ERCC3-209ENST00000494464 ERC1Q8IUD2 1116 aa16.19■□□□□ 0.18
ERCC3-209ENST00000494464 RPAP2Q8IXW5 612 aaPredicted RBP16.19■□□□□ 0.18
ERCC3-209ENST00000494464 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.19■□□□□ 0.18
ERCC3-209ENST00000494464 DBNDD2Q9BQY9 259 aa16.19■□□□□ 0.18
ERCC3-209ENST00000494464 CFHR5Q9BXR6 569 aa16.19■□□□□ 0.18
ERCC3-209ENST00000494464 INHBEP58166 350 aa16.18■□□□□ 0.18
ERCC3-209ENST00000494464 MECOMQ03112 1051 aa16.18■□□□□ 0.18
ERCC3-209ENST00000494464 NFIAQ12857 509 aa16.18■□□□□ 0.18
ERCC3-209ENST00000494464 HSP90AB4PQ58FF6 505 aa16.18■□□□□ 0.18
ERCC3-209ENST00000494464 CCDC158Q5M9N0 1113 aa16.18■□□□□ 0.18
ERCC3-209ENST00000494464 TTC39AQ5SRH9 613 aa16.18■□□□□ 0.18
ERCC3-209ENST00000494464 DCAF15Q66K64 600 aa16.18■□□□□ 0.18
ERCC3-209ENST00000494464 IDI2Q9BXS1 227 aa16.18■□□□□ 0.18
ERCC3-209ENST00000494464 USP40Q9NVE5 1235 aa16.18■□□□□ 0.18
ERCC3-209ENST00000494464 FAM198AQ9UFP1 575 aa16.18■□□□□ 0.18
ERCC3-209ENST00000494464 DBNLQ9UJU6 430 aaKnown RBP16.18■□□□□ 0.18
ERCC3-209ENST00000494464 IGSF3O75054 1194 aa16.17■□□□□ 0.18
ERCC3-209ENST00000494464 HMMRO75330 724 aa16.17■□□□□ 0.18
ERCC3-209ENST00000494464 ENTPD3O75355 529 aa16.17■□□□□ 0.18
ERCC3-209ENST00000494464 GJA5P36382 358 aa16.17■□□□□ 0.18
ERCC3-209ENST00000494464 MAP3K9P80192 1104 aa16.17■□□□□ 0.18
ERCC3-209ENST00000494464 VGLL4Q14135 290 aa16.17■□□□□ 0.18
ERCC3-209ENST00000494464 NOM1Q5C9Z4 860 aaKnown RBP16.17■□□□□ 0.18
ERCC3-209ENST00000494464 ZNF384Q8TF68 577 aa16.17■□□□□ 0.18
ERCC3-209ENST00000494464 NSUN4Q96CB9 384 aaKnown RBP16.17■□□□□ 0.18
ERCC3-209ENST00000494464 EXOC6BQ9Y2D4 811 aa16.17■□□□□ 0.18
ERCC3-209ENST00000494464 CSADQ9Y600 493 aa16.17■□□□□ 0.18
ERCC3-209ENST00000494464 AK9Q5TCS8 1911 aa16.17■□□□□ 0.18
ERCC3-209ENST00000494464 ATRNL1Q5VV63 1379 aa16.16■□□□□ 0.18
ERCC3-209ENST00000494464 ALDH1A1P00352 501 aa16.16■□□□□ 0.18
ERCC3-209ENST00000494464 BTDP43251 543 aa16.16■□□□□ 0.18
ERCC3-209ENST00000494464 GSTO1P78417 241 aa16.16■□□□□ 0.18
ERCC3-209ENST00000494464 EAF2Q96CJ1 260 aaPredicted RBP16.16■□□□□ 0.18
ERCC3-209ENST00000494464 OPTNQ96CV9 577 aa16.16■□□□□ 0.18
ERCC3-209ENST00000494464 ELP3Q9H9T3 547 aa16.16■□□□□ 0.18
ERCC3-209ENST00000494464 MYO5AQ9Y4I1 1855 aaKnown RBP16.16■□□□□ 0.18
ERCC3-209ENST00000494464 COL2A1P02458 1487 aaPredicted RBP16.16■□□□□ 0.18
ERCC3-209ENST00000494464 GPR75-ASB3A0A0A6YYF3 556 aa16.15■□□□□ 0.18
ERCC3-209ENST00000494464 MAP4K4O95819 1239 aaPredicted RBP16.15■□□□□ 0.18
ERCC3-209ENST00000494464 LDHCP07864 332 aa16.15■□□□□ 0.18
ERCC3-209ENST00000494464 TCP10Q12799 353 aa16.15■□□□□ 0.18
ERCC3-209ENST00000494464 TBC1D9Q6ZT07 1266 aa16.15■□□□□ 0.18
ERCC3-209ENST00000494464 WRNIP1Q96S55 665 aa16.15■□□□□ 0.18
ERCC3-209ENST00000494464 ZNF341Q9BYN7 854 aa16.15■□□□□ 0.18
ERCC3-209ENST00000494464 TLR7Q9NYK1 1049 aaKnown RBP16.15■□□□□ 0.18
ERCC3-209ENST00000494464 TESPA1A2RU30 521 aaPredicted RBP16.14■□□□□ 0.17
ERCC3-209ENST00000494464 SPDYE5A6NIY4 337 aa16.14■□□□□ 0.17
ERCC3-209ENST00000494464 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
ERCC3-209ENST00000494464 WDHD1O75717 1129 aaPredicted RBP16.14■□□□□ 0.17
ERCC3-209ENST00000494464 RGS3P49796 1198 aa16.14■□□□□ 0.17
ERCC3-209ENST00000494464 RHBDL3P58872 404 aa16.14■□□□□ 0.17
ERCC3-209ENST00000494464 C20orf194Q5TEA3 1177 aa16.14■□□□□ 0.17
ERCC3-209ENST00000494464 IFNL1Q8IU54 200 aa16.14■□□□□ 0.17
ERCC3-209ENST00000494464 SIRT2Q8IXJ6 389 aa16.14■□□□□ 0.17
ERCC3-209ENST00000494464 RAI14Q9P0K7 980 aa16.14■□□□□ 0.17
ERCC3-209ENST00000494464 LRP2BPQ9P2M1 347 aa16.14■□□□□ 0.17
ERCC3-209ENST00000494464 SNCAIPQ9Y6H5 919 aa16.14■□□□□ 0.17
ERCC3-209ENST00000494464 FOCADQ5VW36 1801 aa16.14■□□□□ 0.17
ERCC3-209ENST00000494464 CDK5RAP2Q96SN8 1893 aa16.14■□□□□ 0.17
ERCC3-209ENST00000494464 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
ERCC3-209ENST00000494464 ABHD8Q96I13 439 aa16.13■□□□□ 0.17
ERCC3-209ENST00000494464 CCDC8Q9H0W5 538 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms