RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 GNAI2P04899 355 aa16.6■□□□□ 0.25
CTDSP1-212ENST00000494067 MAP3K9P80192 1104 aa16.6■□□□□ 0.25
CTDSP1-212ENST00000494067 CAP1Q01518 475 aa16.6■□□□□ 0.25
CTDSP1-212ENST00000494067 ZKSCAN2Q63HK3 967 aa16.6■□□□□ 0.25
CTDSP1-212ENST00000494067 CDC42EP5Q6NZY7 148 aa16.6■□□□□ 0.25
CTDSP1-212ENST00000494067 FAM83AQ86UY5 434 aa16.6■□□□□ 0.25
CTDSP1-212ENST00000494067 ZGPATQ8N5A5 531 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-212ENST00000494067 ZNF384Q8TF68 577 aa16.6■□□□□ 0.25
CTDSP1-212ENST00000494067 XAGE2Q96GT9 111 aa16.6■□□□□ 0.25
CTDSP1-212ENST00000494067 C1orf115Q9H7X2 142 aa16.6■□□□□ 0.25
CTDSP1-212ENST00000494067 AKAP2Q9Y2D5 859 aa16.6■□□□□ 0.25
CTDSP1-212ENST00000494067 DOCK2Q92608 1830 aa16.6■□□□□ 0.25
CTDSP1-212ENST00000494067 WDHD1O75717 1129 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 LDHBP07195 334 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 FKBP1CQ5VVH2 108 aa16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 DCAF15Q66K64 600 aa16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 PI16Q6UXB8 463 aa16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 ZFPM1Q8IX07 1006 aa16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 OPTNQ96CV9 577 aa16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 MS4A4AQ96JQ5 239 aa16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 FAM198AQ9UFP1 575 aa16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 ZBED9Q6R2W3 1325 aa16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 RFX7Q2KHR2 1363 aa16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 RPAP1Q9BWH6 1393 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 ZSWIM8A7E2V4 1837 aa16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 MYO5AQ9Y4I1 1855 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-212ENST00000494067 ZBTB22O15209 634 aa16.58■□□□□ 0.24
CTDSP1-212ENST00000494067 SLURP2P0DP57 97 aa16.58■□□□□ 0.24
CTDSP1-212ENST00000494067 POLA2Q14181 598 aa16.58■□□□□ 0.24
CTDSP1-212ENST00000494067 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
CTDSP1-212ENST00000494067 HTTP42858 3142 aa16.58■□□□□ 0.24
CTDSP1-212ENST00000494067 ATRNL1Q5VV63 1379 aa16.57■□□□□ 0.24
CTDSP1-212ENST00000494067 TESPA1A2RU30 521 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-212ENST00000494067 GTF2A2P52657 109 aa16.57■□□□□ 0.24
CTDSP1-212ENST00000494067 FBXO46Q6PJ61 603 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-212ENST00000494067 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
CTDSP1-212ENST00000494067 ZKSCAN4Q969J2 545 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-212ENST00000494067 HPS5Q9UPZ3 1129 aa16.57■□□□□ 0.24
CTDSP1-212ENST00000494067 GAKO14976 1311 aa16.56■□□□□ 0.24
CTDSP1-212ENST00000494067 TCP10Q12799 353 aa16.56■□□□□ 0.24
CTDSP1-212ENST00000494067 MIGA2Q7L4E1 593 aa16.56■□□□□ 0.24
CTDSP1-212ENST00000494067 BRI3BPQ8WY22 251 aa16.56■□□□□ 0.24
CTDSP1-212ENST00000494067 ERO1AQ96HE7 468 aa16.56■□□□□ 0.24
CTDSP1-212ENST00000494067 TNRC18O15417 2968 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-212ENST00000494067 AK9Q5TCS8 1911 aa16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 PDS5AQ29RF7 1337 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 ZBTB7BO15156 539 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 INPP5BP32019 993 aa16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 CRHR2Q13324 411 aa16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 MVPQ14764 893 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 ARHGEF6Q15052 776 aa16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 GORABQ5T7V8 394 aa16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 SPTY2D1Q68D10 685 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 SH3BP5LQ7L8J4 393 aa16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 SSH3Q8TE77 659 aa16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 FAM151AQ8WW52 585 aa16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 OTUD5Q96G74 571 aa16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 WRNIP1Q96S55 665 aa16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 ZNF341Q9BYN7 854 aa16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 HMG20BQ9P0W2 317 aa16.55■□□□□ 0.24
CTDSP1-212ENST00000494067 MAST2Q6P0Q8 1798 aa16.54■□□□□ 0.24
CTDSP1-212ENST00000494067 SOX10P56693 466 aa16.54■□□□□ 0.24
CTDSP1-212ENST00000494067 G3BP1Q13283 466 aaKnown RBP eCLIP16.54■□□□□ 0.24
CTDSP1-212ENST00000494067 TBC1D9Q6ZT07 1266 aa16.54■□□□□ 0.24
CTDSP1-212ENST00000494067 ERO1BQ86YB8 467 aa16.54■□□□□ 0.24
CTDSP1-212ENST00000494067 DZIP1Q86YF9 867 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-212ENST00000494067 NEUROD6Q96NK8 337 aa16.54■□□□□ 0.24
CTDSP1-212ENST00000494067 ZFYVE28Q9HCC9 887 aa16.54■□□□□ 0.24
CTDSP1-212ENST00000494067 DDX4Q9NQI0 724 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-212ENST00000494067 USP40Q9NVE5 1235 aa16.54■□□□□ 0.24
CTDSP1-212ENST00000494067 TRIM17Q9Y577 477 aa16.54■□□□□ 0.24
CTDSP1-212ENST00000494067 CDK5RAP2Q96SN8 1893 aa16.54■□□□□ 0.24
CTDSP1-212ENST00000494067 CCL15-CCL14A0A0B4J2E2 113 aa16.53■□□□□ 0.24
CTDSP1-212ENST00000494067 SPDYE5A6NIY4 337 aa16.53■□□□□ 0.24
CTDSP1-212ENST00000494067 CETPP11597 493 aa16.53■□□□□ 0.24
CTDSP1-212ENST00000494067 ARID4AP29374 1257 aaPredicted RBP16.53■□□□□ 0.24
CTDSP1-212ENST00000494067 MCAMP43121 646 aa16.53■□□□□ 0.24
CTDSP1-212ENST00000494067 ATP8B2P98198 1209 aa16.53■□□□□ 0.24
CTDSP1-212ENST00000494067 CCL15Q16663 113 aa16.53■□□□□ 0.24
CTDSP1-212ENST00000494067 ITPRIPQ8IWB1 547 aa16.53■□□□□ 0.24
CTDSP1-212ENST00000494067 FAM43AQ8N2R8 423 aa16.53■□□□□ 0.24
CTDSP1-212ENST00000494067 PANK1Q8TE04 598 aa16.53■□□□□ 0.24
CTDSP1-212ENST00000494067 ABCF2Q9UG63 623 aa16.53■□□□□ 0.24
CTDSP1-212ENST00000494067 SIPA1L1O43166 1804 aa16.53■□□□□ 0.24
CTDSP1-212ENST00000494067 PHIPQ8WWQ0 1821 aa16.53■□□□□ 0.24
CTDSP1-212ENST00000494067 SP3Q02447 781 aa16.52■□□□□ 0.24
CTDSP1-212ENST00000494067 MECOMQ03112 1051 aa16.52■□□□□ 0.24
CTDSP1-212ENST00000494067 TAF1CQ15572 869 aaPredicted RBP16.52■□□□□ 0.24
CTDSP1-212ENST00000494067 MROH7-TTC4A0A0A0MT08 1334 aa16.51■□□□□ 0.23
CTDSP1-212ENST00000494067 IRF6O14896 467 aa16.51■□□□□ 0.23
CTDSP1-212ENST00000494067 RGS3P49796 1198 aa16.51■□□□□ 0.23
CTDSP1-212ENST00000494067 RHBDL3P58872 404 aa16.51■□□□□ 0.23
CTDSP1-212ENST00000494067 SNAPC2Q13487 334 aa16.51■□□□□ 0.23
CTDSP1-212ENST00000494067 FTSJ3Q8IY81 847 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-212ENST00000494067 SPATA5Q8NB90 893 aa16.51■□□□□ 0.23
CTDSP1-212ENST00000494067 DBNDD2Q9BQY9 259 aa16.51■□□□□ 0.23
CTDSP1-212ENST00000494067 TLR7Q9NYK1 1049 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-212ENST00000494067 ZNF112Q9UJU3 913 aa16.51■□□□□ 0.23
CTDSP1-212ENST00000494067 DOCK1Q14185 1865 aa16.5■□□□□ 0.23
CTDSP1-212ENST00000494067 DDTLA6NHG4 134 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms