RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TIAM2Q8IVF5 1701 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 NBPF26B4DH59 902 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 PTGS1P23219 599 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 CRKLP46109 303 aaKnown RBP13.32□□□□□ -0.28
RFC4-214ENST00000494047 NT5C2P49902 561 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 FAM193AP78312 1265 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 APOBRQ0VD83 1088 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 TRIM29Q14134 588 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 NBPF10Q6P3W6 841 aaKnown RBP13.32□□□□□ -0.28
RFC4-214ENST00000494047 CCDC129Q6ZRS4 1044 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 MB21D2Q8IYB1 491 aaPredicted RBP13.32□□□□□ -0.28
RFC4-214ENST00000494047 NLGN1Q8N2Q7 840 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 NBPF15Q8N660 670 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 SPC24Q8NBT2 197 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 LINC00301Q8NCQ3 95 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 DDX11Q96FC9 970 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 USP28Q96RU2 1077 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 SDF4Q9BRK5 362 aa13.32□□□□□ -0.28
RFC4-214ENST00000494047 ANGEL1Q9UNK9 670 aaKnown RBP13.32□□□□□ -0.28
RFC4-214ENST00000494047 MORC2Q9Y6X9 1032 aaPredicted RBP13.32□□□□□ -0.28
RFC4-214ENST00000494047 C4AP0C0L4 1744 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 GOLGA8BA8MQT2 603 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 SPTLC2O15270 562 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 PRC1O43663 620 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 CTDNEP1O95476 244 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 GNAT2P19087 354 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 CMA1P23946 247 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 RFC4P35249 363 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 SNW1Q13573 536 aaKnown RBP13.31□□□□□ -0.28
RFC4-214ENST00000494047 ALX1Q15699 326 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 ATP2B3Q16720 1220 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 WASHC4Q2M389 1173 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 CT47A1Q5JQC4 288 aaPredicted RBP13.31□□□□□ -0.28
RFC4-214ENST00000494047 MYSM1Q5VVJ2 828 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 LRRC8AQ8IWT6 810 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 FMR1NBQ8N0W7 255 aaPredicted RBP13.31□□□□□ -0.28
RFC4-214ENST00000494047 ANKRD7Q92527 254 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 EDC3Q96F86 508 aaKnown RBP13.31□□□□□ -0.28
RFC4-214ENST00000494047 XAGE2Q96GT9 111 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 CCDC87Q9NVE4 849 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 KIAA1468Q9P260 1216 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 DACH1Q9UI36 760 aa13.31□□□□□ -0.28
RFC4-214ENST00000494047 ANKRD18BA2A2Z9 1011 aa13.3□□□□□ -0.28
RFC4-214ENST00000494047 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
RFC4-214ENST00000494047 TPD52L1Q16890 204 aaPredicted RBP13.3□□□□□ -0.28
RFC4-214ENST00000494047 GIGYF2Q6Y7W6 1299 aaKnown RBP13.3□□□□□ -0.28
RFC4-214ENST00000494047 CREBRFQ8IUR6 639 aa13.3□□□□□ -0.28
RFC4-214ENST00000494047 TMTC2Q8N394 836 aa13.3□□□□□ -0.28
RFC4-214ENST00000494047 ARHGEF1Q92888 912 aaKnown RBP13.3□□□□□ -0.28
RFC4-214ENST00000494047 SEC62Q99442 399 aaKnown RBP13.3□□□□□ -0.28
RFC4-214ENST00000494047 ORC3Q9UBD5 711 aaPredicted RBP13.3□□□□□ -0.28
RFC4-214ENST00000494047 PYCARDQ9ULZ3 195 aa13.3□□□□□ -0.28
RFC4-214ENST00000494047 TAF6LQ9Y6J9 622 aa13.3□□□□□ -0.28
RFC4-214ENST00000494047 MROH5Q6ZUA9 1318 aa13.3□□□□□ -0.28
RFC4-214ENST00000494047 DOCK2Q92608 1830 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 CHD4Q14839 1912 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 KLF18A0A0U1RQI7 1052 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 FAM237AA0A1B0GTK4 181 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 CCDC196A0A1B0GTZ2 297 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 GOLGA6L9A6NEM1 432 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 ERVV-1B6SEH8 477 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 SLC3A2P08195 630 aaKnown RBP13.29□□□□□ -0.28
RFC4-214ENST00000494047 CYP19A1P11511 503 aaPredicted RBP13.29□□□□□ -0.28
RFC4-214ENST00000494047 TNNT1P13805 278 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 LIFRP42702 1097 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 RBM10P98175 930 aaKnown RBP13.29□□□□□ -0.28
RFC4-214ENST00000494047 PTPN14Q15678 1187 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 UTP14CQ5TAP6 766 aaKnown RBP13.29□□□□□ -0.28
RFC4-214ENST00000494047 FAM173BQ6P4H8 233 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 SGMS1Q86VZ5 419 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 AMIGO3Q86WK7 504 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 FCHSD1Q86WN1 690 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 DNAJC10Q8IXB1 793 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 ZNF830Q96NB3 372 aaPredicted RBP13.29□□□□□ -0.28
RFC4-214ENST00000494047 CD2APQ9Y5K6 639 aa13.29□□□□□ -0.28
RFC4-214ENST00000494047 GPAA1O43292 621 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 AP5Z1O43299 807 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 IGSF3O75054 1194 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 ARID4AP29374 1257 aaPredicted RBP13.28□□□□□ -0.28
RFC4-214ENST00000494047 ADD2P35612 726 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 NLRP12P59046 1061 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 TIMM10P62072 90 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 FKBP4Q02790 459 aaKnown RBP eCLIP13.28□□□□□ -0.28
RFC4-214ENST00000494047 SAFBQ15424 915 aaKnown RBP eCLIP13.28□□□□□ -0.28
RFC4-214ENST00000494047 SLFNL1Q499Z3 407 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 ANO1Q5XXA6 986 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 INTS5Q6P9B9 1019 aaKnown RBP13.28□□□□□ -0.28
RFC4-214ENST00000494047 TTLL7Q6ZT98 887 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 KIF18AQ8NI77 898 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 GTPBP4Q9BZE4 634 aaKnown RBP13.28□□□□□ -0.28
RFC4-214ENST00000494047 KRT23Q9C075 422 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 BCL2L12Q9HB09 334 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 NAP1L2Q9ULW6 460 aaPredicted RBP13.28□□□□□ -0.28
RFC4-214ENST00000494047 PCDHA7Q9UN72 937 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 CEP131Q9UPN4 1083 aa13.28□□□□□ -0.28
RFC4-214ENST00000494047 RIC1Q4ADV7 1423 aa13.27□□□□□ -0.28
RFC4-214ENST00000494047 AKAP11Q9UKA4 1901 aa13.27□□□□□ -0.28
RFC4-214ENST00000494047 M0R2C6 588 aa13.27□□□□□ -0.29
RFC4-214ENST00000494047 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms