RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 MCAMP43121 646 aa15.6■□□□□ 0.09
HSPG2-212ENST00000493940 C20orf194Q5TEA3 1177 aa15.6■□□□□ 0.09
HSPG2-212ENST00000493940 DBNDD2Q9BQY9 259 aa15.6■□□□□ 0.09
HSPG2-212ENST00000493940 GNL3LQ9NVN8 582 aaKnown RBP15.6■□□□□ 0.09
HSPG2-212ENST00000493940 AKAP2Q9Y2D5 859 aa15.6■□□□□ 0.09
HSPG2-212ENST00000493940 NOP58Q9Y2X3 529 aaKnown RBP15.6■□□□□ 0.09
HSPG2-212ENST00000493940 SURF6O75683 361 aaKnown RBP15.59■□□□□ 0.09
HSPG2-212ENST00000493940 SIRT2Q8IXJ6 389 aa15.59■□□□□ 0.09
HSPG2-212ENST00000493940 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.59■□□□□ 0.09
HSPG2-212ENST00000493940 ELP3Q9H9T3 547 aa15.59■□□□□ 0.09
HSPG2-212ENST00000493940 TLR7Q9NYK1 1049 aaKnown RBP15.59■□□□□ 0.09
HSPG2-212ENST00000493940 ABCF2Q9UG63 623 aa15.59■□□□□ 0.09
HSPG2-212ENST00000493940 COG6Q9Y2V7 657 aa15.59■□□□□ 0.09
HSPG2-212ENST00000493940 MAST3O60307 1309 aa15.59■□□□□ 0.09
HSPG2-212ENST00000493940 PHIPQ8WWQ0 1821 aa15.59■□□□□ 0.09
HSPG2-212ENST00000493940 IGF2BP3O00425 579 aaKnown RBP eCLIP15.58■□□□□ 0.08
HSPG2-212ENST00000493940 ARID4AP29374 1257 aaPredicted RBP15.58■□□□□ 0.08
HSPG2-212ENST00000493940 TCP10Q12799 353 aa15.58■□□□□ 0.08
HSPG2-212ENST00000493940 TNFAIP1Q13829 316 aa15.58■□□□□ 0.08
HSPG2-212ENST00000493940 TNNI3KQ59H18 835 aa15.58■□□□□ 0.08
HSPG2-212ENST00000493940 FKBP1CQ5VVH2 108 aa15.58■□□□□ 0.08
HSPG2-212ENST00000493940 MIGA2Q7L4E1 593 aa15.58■□□□□ 0.08
HSPG2-212ENST00000493940 FAM83AQ86UY5 434 aa15.58■□□□□ 0.08
HSPG2-212ENST00000493940 PTPN18Q99952 460 aa15.58■□□□□ 0.08
HSPG2-212ENST00000493940 SNRKQ9NRH2 765 aa15.58■□□□□ 0.08
HSPG2-212ENST00000493940 USP40Q9NVE5 1235 aa15.58■□□□□ 0.08
HSPG2-212ENST00000493940 RCAN3Q9UKA8 241 aa15.58■□□□□ 0.08
HSPG2-212ENST00000493940 FPGT-TNNI3KV9GXZ4 949 aa15.58■□□□□ 0.08
HSPG2-212ENST00000493940 GAKO14976 1311 aa15.58■□□□□ 0.08
HSPG2-212ENST00000493940 SIPA1L1O43166 1804 aa15.57■□□□□ 0.08
HSPG2-212ENST00000493940 FOCADQ5VW36 1801 aa15.57■□□□□ 0.08
HSPG2-212ENST00000493940 IREB2P48200 963 aaKnown RBP15.57■□□□□ 0.08
HSPG2-212ENST00000493940 MECOMQ03112 1051 aa15.57■□□□□ 0.08
HSPG2-212ENST00000493940 VGLL4Q14135 290 aa15.57■□□□□ 0.08
HSPG2-212ENST00000493940 MVPQ14764 893 aaKnown RBP15.57■□□□□ 0.08
HSPG2-212ENST00000493940 SH3BP5LQ7L8J4 393 aa15.57■□□□□ 0.08
HSPG2-212ENST00000493940 ANKRD13AQ8IZ07 590 aa15.57■□□□□ 0.08
HSPG2-212ENST00000493940 SPATA5Q8NB90 893 aa15.57■□□□□ 0.08
HSPG2-212ENST00000493940 FAM151AQ8WW52 585 aa15.57■□□□□ 0.08
HSPG2-212ENST00000493940 EAF2Q96CJ1 260 aaPredicted RBP15.57■□□□□ 0.08
HSPG2-212ENST00000493940 PDS5AQ29RF7 1337 aaKnown RBP15.57■□□□□ 0.08
HSPG2-212ENST00000493940 ZSWIM8A7E2V4 1837 aa15.57■□□□□ 0.08
HSPG2-212ENST00000493940 PTPRFP10586 1907 aa15.56■□□□□ 0.08
HSPG2-212ENST00000493940 CENPFP49454 3210 aa15.56■□□□□ 0.08
HSPG2-212ENST00000493940 TNNI2P48788 182 aa15.56■□□□□ 0.08
HSPG2-212ENST00000493940 REM2Q8IYK8 340 aaPredicted RBP15.56■□□□□ 0.08
HSPG2-212ENST00000493940 ZKSCAN4Q969J2 545 aaPredicted RBP15.56■□□□□ 0.08
HSPG2-212ENST00000493940 OPTNQ96CV9 577 aa15.56■□□□□ 0.08
HSPG2-212ENST00000493940 MS4A4AQ96JQ5 239 aa15.56■□□□□ 0.08
HSPG2-212ENST00000493940 CCDC8Q9H0W5 538 aaPredicted RBP15.56■□□□□ 0.08
HSPG2-212ENST00000493940 GPR108Q9NPR9 543 aa15.56■□□□□ 0.08
HSPG2-212ENST00000493940 DDX4Q9NQI0 724 aaKnown RBP15.56■□□□□ 0.08
HSPG2-212ENST00000493940 ZBTB40Q9NUA8 1239 aa15.56■□□□□ 0.08
HSPG2-212ENST00000493940 DBNLQ9UJU6 430 aaKnown RBP15.56■□□□□ 0.08
HSPG2-212ENST00000493940 EXOC6BQ9Y2D4 811 aa15.56■□□□□ 0.08
HSPG2-212ENST00000493940 RFX7Q2KHR2 1363 aa15.56■□□□□ 0.08
HSPG2-212ENST00000493940 WDHD1O75717 1129 aaPredicted RBP15.55■□□□□ 0.08
HSPG2-212ENST00000493940 RHBDL3P58872 404 aa15.55■□□□□ 0.08
HSPG2-212ENST00000493940 MAP3K9P80192 1104 aa15.55■□□□□ 0.08
HSPG2-212ENST00000493940 CAP1Q01518 475 aa15.55■□□□□ 0.08
HSPG2-212ENST00000493940 NSUN4Q96CB9 384 aaKnown RBP15.55■□□□□ 0.08
HSPG2-212ENST00000493940 FAM163AQ96GL9 167 aaPredicted RBP15.55■□□□□ 0.08
HSPG2-212ENST00000493940 PCDH10Q9P2E7 1040 aa15.55■□□□□ 0.08
HSPG2-212ENST00000493940 SNCAIPQ9Y6H5 919 aa15.55■□□□□ 0.08
HSPG2-212ENST00000493940 HTTP42858 3142 aa15.54■□□□□ 0.08
HSPG2-212ENST00000493940 ATAD5Q96QE3 1844 aa15.54■□□□□ 0.08
HSPG2-212ENST00000493940 ATRNL1Q5VV63 1379 aa15.54■□□□□ 0.08
HSPG2-212ENST00000493940 UNCXA6NJT0 531 aa15.54■□□□□ 0.08
HSPG2-212ENST00000493940 CYP2E1P05181 493 aaPredicted RBP15.54■□□□□ 0.08
HSPG2-212ENST00000493940 ZBTB48P10074 688 aaPredicted RBP15.54■□□□□ 0.08
HSPG2-212ENST00000493940 INPP5BP32019 993 aa15.54■□□□□ 0.08
HSPG2-212ENST00000493940 GORABQ5T7V8 394 aa15.54■□□□□ 0.08
HSPG2-212ENST00000493940 IFNL1Q8IU54 200 aa15.54■□□□□ 0.08
HSPG2-212ENST00000493940 ZNF296Q8WUU4 475 aaPredicted RBP15.54■□□□□ 0.08
HSPG2-212ENST00000493940 TMOD2Q9NZR1 351 aa15.54■□□□□ 0.08
HSPG2-212ENST00000493940 NDUFB9Q9Y6M9 179 aa15.54■□□□□ 0.08
HSPG2-212ENST00000493940 MAST2Q6P0Q8 1798 aa15.54■□□□□ 0.08
HSPG2-212ENST00000493940 RPAP1Q9BWH6 1393 aaPredicted RBP15.53■□□□□ 0.08
HSPG2-212ENST00000493940 MROH7-TTC4A0A0A0MT08 1334 aa15.53■□□□□ 0.08
HSPG2-212ENST00000493940 GPR75-ASB3A0A0A6YYF3 556 aa15.53■□□□□ 0.08
HSPG2-212ENST00000493940 TESPA1A2RU30 521 aaPredicted RBP15.53■□□□□ 0.08
HSPG2-212ENST00000493940 DDTLA6NHG4 134 aaPredicted RBP15.53■□□□□ 0.08
HSPG2-212ENST00000493940 BTDP43251 543 aa15.53■□□□□ 0.08
HSPG2-212ENST00000493940 RGS3P49796 1198 aa15.53■□□□□ 0.08
HSPG2-212ENST00000493940 OS9Q13438 667 aaPredicted RBP15.53■□□□□ 0.08
HSPG2-212ENST00000493940 ERICH6Q7L0X2 663 aa15.53■□□□□ 0.08
HSPG2-212ENST00000493940 WRNIP1Q96S55 665 aa15.53■□□□□ 0.08
HSPG2-212ENST00000493940 MYH1P12882 1939 aa15.53■□□□□ 0.08
HSPG2-212ENST00000493940 TNRC18O15417 2968 aaPredicted RBP15.52■□□□□ 0.08
HSPG2-212ENST00000493940 MANSC4A6NHS7 340 aaPredicted RBP15.52■□□□□ 0.08
HSPG2-212ENST00000493940 GPR25O00155 361 aa15.52■□□□□ 0.08
HSPG2-212ENST00000493940 ZAP70P43403 619 aa15.52■□□□□ 0.08
HSPG2-212ENST00000493940 SREBF2Q12772 1141 aa15.52■□□□□ 0.08
HSPG2-212ENST00000493940 ADGRA1Q86SQ6 560 aa15.52■□□□□ 0.08
HSPG2-212ENST00000493940 DZIP1Q86YF9 867 aaKnown RBP15.52■□□□□ 0.08
HSPG2-212ENST00000493940 ZGPATQ8N5A5 531 aaKnown RBP15.52■□□□□ 0.08
HSPG2-212ENST00000493940 BRI3BPQ8WY22 251 aa15.52■□□□□ 0.08
HSPG2-212ENST00000493940 OTUD5Q96G74 571 aa15.52■□□□□ 0.08
HSPG2-212ENST00000493940 CFHR5Q9BXR6 569 aa15.52■□□□□ 0.08
HSPG2-212ENST00000493940 IDI2Q9BXS1 227 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms