RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 ZFYVE28Q9HCC9 887 aa9.78□□□□□ -0.84
SEMA3F-209ENST00000493743 DOCK1Q14185 1865 aa9.77□□□□□ -0.85
SEMA3F-209ENST00000493743 EYA2O00167 538 aa9.77□□□□□ -0.85
SEMA3F-209ENST00000493743 WDHD1O75717 1129 aaPredicted RBP9.77□□□□□ -0.85
SEMA3F-209ENST00000493743 SLC5A1P13866 664 aa9.77□□□□□ -0.85
SEMA3F-209ENST00000493743 PLCB2Q00722 1185 aa9.77□□□□□ -0.85
SEMA3F-209ENST00000493743 DCAF15Q66K64 600 aa9.77□□□□□ -0.85
SEMA3F-209ENST00000493743 APOBEC3HQ6NTF7 200 aaKnown RBP9.77□□□□□ -0.85
SEMA3F-209ENST00000493743 HHIPL2Q6UWX4 724 aa9.77□□□□□ -0.85
SEMA3F-209ENST00000493743 ERO1BQ86YB8 467 aa9.77□□□□□ -0.85
SEMA3F-209ENST00000493743 FAM43AQ8N2R8 423 aa9.77□□□□□ -0.85
SEMA3F-209ENST00000493743 WRNIP1Q96S55 665 aa9.77□□□□□ -0.85
SEMA3F-209ENST00000493743 ZCCHC17Q9NP64 241 aaKnown RBP9.77□□□□□ -0.85
SEMA3F-209ENST00000493743 SNCAIPQ9Y6H5 919 aa9.77□□□□□ -0.85
SEMA3F-209ENST00000493743 CETPP11597 493 aa9.76□□□□□ -0.85
SEMA3F-209ENST00000493743 CDK11BP21127 795 aaKnown RBP9.76□□□□□ -0.85
SEMA3F-209ENST00000493743 RFX5P48382 616 aaPredicted RBP9.76□□□□□ -0.85
SEMA3F-209ENST00000493743 CAP1Q01518 475 aa9.76□□□□□ -0.85
SEMA3F-209ENST00000493743 PPIL2Q13356 520 aa9.76□□□□□ -0.85
SEMA3F-209ENST00000493743 ALDH1L2Q3SY69 923 aa9.76□□□□□ -0.85
SEMA3F-209ENST00000493743 WDR66Q8TBY9 1149 aa9.76□□□□□ -0.85
SEMA3F-209ENST00000493743 LPIN2Q92539 896 aa9.76□□□□□ -0.85
SEMA3F-209ENST00000493743 GCC1Q96CN9 775 aa9.76□□□□□ -0.85
SEMA3F-209ENST00000493743 PHIPQ8WWQ0 1821 aa9.76□□□□□ -0.85
SEMA3F-209ENST00000493743 ATAD5Q96QE3 1844 aa9.76□□□□□ -0.85
SEMA3F-209ENST00000493743 ZBED9Q6R2W3 1325 aa9.76□□□□□ -0.85
SEMA3F-209ENST00000493743 TLR2O60603 784 aa9.75□□□□□ -0.85
SEMA3F-209ENST00000493743 SLFN5Q08AF3 891 aa9.75□□□□□ -0.85
SEMA3F-209ENST00000493743 SNAPC2Q13487 334 aa9.75□□□□□ -0.85
SEMA3F-209ENST00000493743 SLC9C1Q4G0N8 1177 aa9.75□□□□□ -0.85
SEMA3F-209ENST00000493743 NBPF11Q86T75 865 aa9.75□□□□□ -0.85
SEMA3F-209ENST00000493743 FAM151AQ8WW52 585 aa9.75□□□□□ -0.85
SEMA3F-209ENST00000493743 ZKSCAN4Q969J2 545 aaPredicted RBP9.75□□□□□ -0.85
SEMA3F-209ENST00000493743 ZNF333Q96JL9 665 aa9.75□□□□□ -0.85
SEMA3F-209ENST00000493743 TMEM106CQ9BVX2 250 aa9.75□□□□□ -0.85
SEMA3F-209ENST00000493743 ZNF341Q9BYN7 854 aa9.75□□□□□ -0.85
SEMA3F-209ENST00000493743 SMC4Q9NTJ3 1288 aa9.75□□□□□ -0.85
SEMA3F-209ENST00000493743 PTCH2Q9Y6C5 1203 aa9.75□□□□□ -0.85
SEMA3F-209ENST00000493743 HTTP42858 3142 aa9.75□□□□□ -0.85
SEMA3F-209ENST00000493743 BTBD19C9JJ37 291 aa9.74□□□□□ -0.85
SEMA3F-209ENST00000493743 IRF6O14896 467 aa9.74□□□□□ -0.85
SEMA3F-209ENST00000493743 CIAO1O76071 339 aa9.74□□□□□ -0.85
SEMA3F-209ENST00000493743 UBTFL1P0CB47 393 aaPredicted RBP9.74□□□□□ -0.85
SEMA3F-209ENST00000493743 EN2P19622 333 aaPredicted RBP9.74□□□□□ -0.85
SEMA3F-209ENST00000493743 BRD2P25440 801 aaKnown RBP9.74□□□□□ -0.85
SEMA3F-209ENST00000493743 PPATQ06203 517 aa9.74□□□□□ -0.85
SEMA3F-209ENST00000493743 KIF22Q14807 665 aa9.74□□□□□ -0.85
SEMA3F-209ENST00000493743 TMEM132AQ24JP5 1023 aa9.74□□□□□ -0.85
SEMA3F-209ENST00000493743 ATG9AQ7Z3C6 839 aa9.74□□□□□ -0.85
SEMA3F-209ENST00000493743 ANP32EQ9BTT0 268 aa9.74□□□□□ -0.85
SEMA3F-209ENST00000493743 DAGLAQ9Y4D2 1042 aa9.74□□□□□ -0.85
SEMA3F-209ENST00000493743 GNRH1P01148 92 aa9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 LDHBP07195 334 aaKnown RBP9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 INPP5BP32019 993 aa9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 LACTBP83111 547 aaPredicted RBP9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 DIXDC1Q155Q3 683 aa9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 ATP2B3Q16720 1220 aa9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 CDC42EP5Q6NZY7 148 aa9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 MIGA2Q7L4E1 593 aa9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 YTHDC1Q96MU7 727 aaKnown RBP9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 SIL1Q9H173 461 aa9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 GNL3LQ9NVN8 582 aaKnown RBP9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 CEP126Q9P2H0 1117 aa9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 HDAC5Q9UQL6 1122 aa9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 SALL1Q9NSC2 1324 aa9.73□□□□□ -0.85
SEMA3F-209ENST00000493743 CDK5RAP2Q96SN8 1893 aa9.72□□□□□ -0.85
SEMA3F-209ENST00000493743 SEMA3EO15041 775 aa9.72□□□□□ -0.85
SEMA3F-209ENST00000493743 PRDX5P30044 214 aa9.72□□□□□ -0.85
SEMA3F-209ENST00000493743 PRMT2P55345 433 aa9.72□□□□□ -0.85
SEMA3F-209ENST00000493743 HNRNPUQ00839 825 aaKnown RBP eCLIP9.72□□□□□ -0.85
SEMA3F-209ENST00000493743 TCP10Q12799 353 aa9.72□□□□□ -0.85
SEMA3F-209ENST00000493743 ANKRD23Q86SG2 305 aa9.72□□□□□ -0.85
SEMA3F-209ENST00000493743 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.72□□□□□ -0.85
SEMA3F-209ENST00000493743 ARHGAP39Q9C0H5 1083 aa9.72□□□□□ -0.85
SEMA3F-209ENST00000493743 ZNF112Q9UJU3 913 aa9.72□□□□□ -0.85
SEMA3F-209ENST00000493743 DENND2AQ9ULE3 1009 aa9.72□□□□□ -0.85
SEMA3F-209ENST00000493743 KCNH4Q9UQ05 1017 aa9.72□□□□□ -0.85
SEMA3F-209ENST00000493743 CENPFP49454 3210 aa9.71□□□□□ -0.85
SEMA3F-209ENST00000493743 MAST2Q6P0Q8 1798 aa9.71□□□□□ -0.85
SEMA3F-209ENST00000493743 FOCADQ5VW36 1801 aa9.71□□□□□ -0.85
SEMA3F-209ENST00000493743 ZBTB22O15209 634 aa9.71□□□□□ -0.86
SEMA3F-209ENST00000493743 CT47B1P0C2W7 299 aaPredicted RBP9.71□□□□□ -0.86
SEMA3F-209ENST00000493743 IL15P40933 162 aaPredicted RBP9.71□□□□□ -0.86
SEMA3F-209ENST00000493743 NFIAQ12857 509 aa9.71□□□□□ -0.86
SEMA3F-209ENST00000493743 SLC4A8Q2Y0W8 1093 aa9.71□□□□□ -0.86
SEMA3F-209ENST00000493743 NOL9Q5SY16 702 aaKnown RBP9.71□□□□□ -0.86
SEMA3F-209ENST00000493743 C17orf99Q6UX52 265 aa9.71□□□□□ -0.86
SEMA3F-209ENST00000493743 ZGPATQ8N5A5 531 aaKnown RBP9.71□□□□□ -0.86
SEMA3F-209ENST00000493743 CDCA7LQ96GN5 454 aa9.71□□□□□ -0.86
SEMA3F-209ENST00000493743 API5Q9BZZ5 524 aaKnown RBP9.71□□□□□ -0.86
SEMA3F-209ENST00000493743 USP40Q9NVE5 1235 aa9.71□□□□□ -0.86
SEMA3F-209ENST00000493743 FAM198AQ9UFP1 575 aa9.71□□□□□ -0.86
SEMA3F-209ENST00000493743 DOCK3Q8IZD9 2030 aa9.71□□□□□ -0.86
SEMA3F-209ENST00000493743 LOC285556D6RIA3 1793 aa9.7□□□□□ -0.86
SEMA3F-209ENST00000493743 MYO5AQ9Y4I1 1855 aaKnown RBP9.7□□□□□ -0.86
SEMA3F-209ENST00000493743 PDHXO00330 501 aa9.7□□□□□ -0.86
SEMA3F-209ENST00000493743 PHKA1P46020 1223 aa9.7□□□□□ -0.86
SEMA3F-209ENST00000493743 HABP4Q5JVS0 413 aaKnown RBP9.7□□□□□ -0.86
SEMA3F-209ENST00000493743 TRMT2AQ8IZ69 625 aaKnown RBP9.7□□□□□ -0.86
SEMA3F-209ENST00000493743 SH3TC2Q8TF17 1288 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms