RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 MIGA2Q7L4E1 593 aa15.46■□□□□ 0.07
SAMM50-205ENST00000493621 SH3TC2Q8TF17 1288 aa15.46■□□□□ 0.07
SAMM50-205ENST00000493621 ZNF341Q9BYN7 854 aa15.46■□□□□ 0.07
SAMM50-205ENST00000493621 USP44Q9H0E7 712 aa15.46■□□□□ 0.07
SAMM50-205ENST00000493621 ZCCHC17Q9NP64 241 aaKnown RBP15.46■□□□□ 0.07
SAMM50-205ENST00000493621 RPAP1Q9BWH6 1393 aaPredicted RBP15.46■□□□□ 0.07
SAMM50-205ENST00000493621 ZNF521Q96K83 1311 aa15.45■□□□□ 0.06
SAMM50-205ENST00000493621 KIF16BQ96L93 1317 aa15.45■□□□□ 0.06
SAMM50-205ENST00000493621 SLC5A1P13866 664 aa15.45■□□□□ 0.06
SAMM50-205ENST00000493621 INPP5BP32019 993 aa15.45■□□□□ 0.06
SAMM50-205ENST00000493621 ZEB1P37275 1124 aaPredicted RBP15.44■□□□□ 0.06
SAMM50-205ENST00000493621 PPATQ06203 517 aa15.44■□□□□ 0.06
SAMM50-205ENST00000493621 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.44■□□□□ 0.06
SAMM50-205ENST00000493621 WDR66Q8TBY9 1149 aa15.44■□□□□ 0.06
SAMM50-205ENST00000493621 FAM151AQ8WW52 585 aa15.44■□□□□ 0.06
SAMM50-205ENST00000493621 EYA2O00167 538 aa15.43■□□□□ 0.06
SAMM50-205ENST00000493621 GNRH1P01148 92 aa15.43■□□□□ 0.06
SAMM50-205ENST00000493621 RFX5P48382 616 aaPredicted RBP15.43■□□□□ 0.06
SAMM50-205ENST00000493621 TCP10Q12799 353 aa15.43■□□□□ 0.06
SAMM50-205ENST00000493621 SSH1Q8WYL5 1049 aa15.43■□□□□ 0.06
SAMM50-205ENST00000493621 LPIN2Q92539 896 aa15.43■□□□□ 0.06
SAMM50-205ENST00000493621 CPA4Q9UI42 421 aa15.43■□□□□ 0.06
SAMM50-205ENST00000493621 DAGLAQ9Y4D2 1042 aa15.43■□□□□ 0.06
SAMM50-205ENST00000493621 CEP290O15078 2479 aa15.42■□□□□ 0.06
SAMM50-205ENST00000493621 DIXDC1Q155Q3 683 aa15.42■□□□□ 0.06
SAMM50-205ENST00000493621 CDC42EP5Q6NZY7 148 aa15.42■□□□□ 0.06
SAMM50-205ENST00000493621 C17orf99Q6UX52 265 aa15.42■□□□□ 0.06
SAMM50-205ENST00000493621 ANKRD23Q86SG2 305 aa15.42■□□□□ 0.06
SAMM50-205ENST00000493621 MYH2Q9UKX2 1941 aa15.42■□□□□ 0.06
SAMM50-205ENST00000493621 DOCK2Q92608 1830 aa15.42■□□□□ 0.06
SAMM50-205ENST00000493621 MGAMO43451 1857 aa15.42■□□□□ 0.06
SAMM50-205ENST00000493621 ZNF316A6NFI3 1004 aaPredicted RBP15.41■□□□□ 0.06
SAMM50-205ENST00000493621 PDHXO00330 501 aa15.41■□□□□ 0.06
SAMM50-205ENST00000493621 CTGFP29279 349 aa15.41■□□□□ 0.06
SAMM50-205ENST00000493621 PRDX5P30044 214 aa15.41■□□□□ 0.06
SAMM50-205ENST00000493621 PRMT2P55345 433 aa15.41■□□□□ 0.06
SAMM50-205ENST00000493621 NFIAQ12857 509 aa15.41■□□□□ 0.06
SAMM50-205ENST00000493621 ATG9AQ7Z3C6 839 aa15.41■□□□□ 0.06
SAMM50-205ENST00000493621 SIL1Q9H173 461 aa15.41■□□□□ 0.06
SAMM50-205ENST00000493621 ZNF112Q9UJU3 913 aa15.41■□□□□ 0.06
SAMM50-205ENST00000493621 PSMC4P43686 418 aa15.4■□□□□ 0.06
SAMM50-205ENST00000493621 FXR1P51114 621 aaKnown RBP eCLIP15.4■□□□□ 0.06
SAMM50-205ENST00000493621 TRIM47Q96LD4 638 aa15.4■□□□□ 0.06
SAMM50-205ENST00000493621 USP40Q9NVE5 1235 aa15.4■□□□□ 0.06
SAMM50-205ENST00000493621 FAM198AQ9UFP1 575 aa15.4■□□□□ 0.06
SAMM50-205ENST00000493621 KCNH4Q9UQ05 1017 aa15.4■□□□□ 0.06
SAMM50-205ENST00000493621 COLQQ9Y215 455 aaPredicted RBP15.4■□□□□ 0.06
SAMM50-205ENST00000493621 ADGRA2Q96PE1 1338 aa15.4■□□□□ 0.06
SAMM50-205ENST00000493621 E9PSI1 815 aa15.39■□□□□ 0.05
SAMM50-205ENST00000493621 FMNL1O95466 1100 aaPredicted RBP15.39■□□□□ 0.05
SAMM50-205ENST00000493621 LDHBP07195 334 aaKnown RBP15.39■□□□□ 0.05
SAMM50-205ENST00000493621 OSBPP22059 807 aa15.39■□□□□ 0.05
SAMM50-205ENST00000493621 MOGSQ13724 837 aa15.39■□□□□ 0.05
SAMM50-205ENST00000493621 MTFR1Q15390 333 aa15.39■□□□□ 0.05
SAMM50-205ENST00000493621 ATP2B3Q16720 1220 aa15.39■□□□□ 0.05
SAMM50-205ENST00000493621 GNL3LQ9NVN8 582 aaKnown RBP15.39■□□□□ 0.05
SAMM50-205ENST00000493621 SRRDQ9UH36 339 aa15.39■□□□□ 0.05
SAMM50-205ENST00000493621 H0YGN5 161 aa15.38■□□□□ 0.05
SAMM50-205ENST00000493621 HOXD10P28358 340 aa15.38■□□□□ 0.05
SAMM50-205ENST00000493621 NOL9Q5SY16 702 aaKnown RBP15.38■□□□□ 0.05
SAMM50-205ENST00000493621 ZFPM1Q8IX07 1006 aa15.38■□□□□ 0.05
SAMM50-205ENST00000493621 RAET1EQ8TD07 263 aa15.38■□□□□ 0.05
SAMM50-205ENST00000493621 CEP126Q9P2H0 1117 aa15.38■□□□□ 0.05
SAMM50-205ENST00000493621 MYPNQ86TC9 1320 aa15.38■□□□□ 0.05
SAMM50-205ENST00000493621 CIAO1O76071 339 aa15.37■□□□□ 0.05
SAMM50-205ENST00000493621 UBTFL1P0CB47 393 aaPredicted RBP15.37■□□□□ 0.05
SAMM50-205ENST00000493621 GRK4P32298 578 aa15.37■□□□□ 0.05
SAMM50-205ENST00000493621 SHISA4Q96DD7 197 aa15.37■□□□□ 0.05
SAMM50-205ENST00000493621 SMC4Q9NTJ3 1288 aa15.37■□□□□ 0.05
SAMM50-205ENST00000493621 PTPRFP10586 1907 aa15.37■□□□□ 0.05
SAMM50-205ENST00000493621 CYP2C8P10632 490 aa15.36■□□□□ 0.05
SAMM50-205ENST00000493621 PHKA1P46020 1223 aa15.36■□□□□ 0.05
SAMM50-205ENST00000493621 SLFN5Q08AF3 891 aa15.36■□□□□ 0.05
SAMM50-205ENST00000493621 ALDH1L2Q3SY69 923 aa15.36■□□□□ 0.05
SAMM50-205ENST00000493621 GPAT2Q6NUI2 795 aa15.36■□□□□ 0.05
SAMM50-205ENST00000493621 PARK7Q99497 189 aaKnown RBP15.36■□□□□ 0.05
SAMM50-205ENST00000493621 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
SAMM50-205ENST00000493621 DENND2AQ9ULE3 1009 aa15.36■□□□□ 0.05
SAMM50-205ENST00000493621 TRIOBPQ9H2D6 2365 aa15.36■□□□□ 0.05
SAMM50-205ENST00000493621 SALL1Q9NSC2 1324 aa15.36■□□□□ 0.05
SAMM50-205ENST00000493621 DOCK1Q14185 1865 aa15.35■□□□□ 0.05
SAMM50-205ENST00000493621 CXCL11O14625 94 aa15.35■□□□□ 0.05
SAMM50-205ENST00000493621 SEMA3EO15041 775 aa15.35■□□□□ 0.05
SAMM50-205ENST00000493621 RGS3P49796 1198 aa15.35■□□□□ 0.05
SAMM50-205ENST00000493621 FCGRTP55899 365 aa15.35■□□□□ 0.05
SAMM50-205ENST00000493621 DPF3Q92784 378 aa15.35■□□□□ 0.05
SAMM50-205ENST00000493621 BIN2Q9UBW5 565 aaPredicted RBP15.35■□□□□ 0.05
SAMM50-205ENST00000493621 PA2G4Q9UQ80 394 aaKnown RBP15.35■□□□□ 0.05
SAMM50-205ENST00000493621 ZHX2Q9Y6X8 837 aa15.35■□□□□ 0.05
SAMM50-205ENST00000493621 PHIPQ8WWQ0 1821 aa15.35■□□□□ 0.05
SAMM50-205ENST00000493621 ATRNL1Q5VV63 1379 aa15.35■□□□□ 0.05
SAMM50-205ENST00000493621 PHF20L1A8MW92 1017 aa15.34■□□□□ 0.05
SAMM50-205ENST00000493621 BCRP11274 1271 aa15.34■□□□□ 0.05
SAMM50-205ENST00000493621 CCL5P13501 91 aa15.34■□□□□ 0.05
SAMM50-205ENST00000493621 ADORA1P30542 326 aa15.34■□□□□ 0.05
SAMM50-205ENST00000493621 IL15P40933 162 aaPredicted RBP15.34■□□□□ 0.05
SAMM50-205ENST00000493621 PRKCZQ05513 592 aa15.34■□□□□ 0.05
SAMM50-205ENST00000493621 ZSCAN29Q8IWY8 852 aaPredicted RBP15.34■□□□□ 0.05
SAMM50-205ENST00000493621 SCYL3Q8IZE3 742 aa15.34■□□□□ 0.05
SAMM50-205ENST00000493621 NKX2-3Q8TAU0 364 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms