RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 CWC25Q9NXE8 425 aaPredicted RBP9.06□□□□□ -0.96
CAB39-206ENST00000493540 RNF186Q9NXI6 227 aa9.06□□□□□ -0.96
CAB39-206ENST00000493540 GGA1Q9UJY5 639 aa9.06□□□□□ -0.96
CAB39-206ENST00000493540 HPS5Q9UPZ3 1129 aa9.06□□□□□ -0.96
CAB39-206ENST00000493540 MYO3BQ8WXR4 1341 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 WTIPA6NIX2 430 aaPredicted RBP9.05□□□□□ -0.96
CAB39-206ENST00000493540 C6orf229H3BNL8 230 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 KDM4AO75164 1064 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 ATP2B4P23634 1241 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 GRM1Q13255 1194 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 DGKZQ13574 1117 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 WDR43Q15061 677 aaKnown RBP eCLIP9.05□□□□□ -0.96
CAB39-206ENST00000493540 ANGEL2Q5VTE6 544 aaKnown RBP9.05□□□□□ -0.96
CAB39-206ENST00000493540 THSD4Q6ZMP0 1018 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 TSPYL6Q8N831 410 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 C2orf69Q8N8R5 385 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 SPIRE2Q8WWL2 714 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 MYD88Q99836 296 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 TBC1D2Q9BYX2 928 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 MYOZ2Q9NPC6 264 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 DOCK3Q8IZD9 2030 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 ALPK3Q96L96 1907 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 MYH2Q9UKX2 1941 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 FOCADQ5VW36 1801 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 ATAD5Q96QE3 1844 aa9.05□□□□□ -0.96
CAB39-206ENST00000493540 CCDC85CA6NKD9 419 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 NEURL1BA8MQ27 555 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 APAF1O14727 1248 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 CFHP08603 1231 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 USP17L8P0C7I0 530 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 ZNF157P51786 506 aaPredicted RBP9.04□□□□□ -0.96
CAB39-206ENST00000493540 CALD1Q05682 793 aaKnown RBP9.04□□□□□ -0.96
CAB39-206ENST00000493540 SCARF1Q14162 830 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 KMT5BQ4FZB7 885 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 RTL5Q5HYW3 569 aaPredicted RBP9.04□□□□□ -0.96
CAB39-206ENST00000493540 STRIP1Q5VSL9 837 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 KSR2Q6VAB6 950 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 C15orf52Q6ZUT6 534 aaKnown RBP9.04□□□□□ -0.96
CAB39-206ENST00000493540 RIC3Q7Z5B4 369 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 ZNF428Q96B54 188 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 PRR14Q9BWN1 585 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 ZC3H12CQ9C0D7 883 aaKnown RBP9.04□□□□□ -0.96
CAB39-206ENST00000493540 GOPCQ9HD26 462 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 MINPP1Q9UNW1 487 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 IL16Q14005 1332 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 TRIOBPQ9H2D6 2365 aa9.04□□□□□ -0.96
CAB39-206ENST00000493540 LAMA3Q16787 3333 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 USP17L3A6NCW0 530 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 USP17L4A6NCW7 530 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 H7C1W4 665 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 WNT10BO00744 389 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 CSF1RP07333 972 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 TM4SF4P48230 202 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 USP46P62068 366 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 MAP3K11Q16584 847 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 USP17L1Q7RTZ2 530 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 CTU1Q7Z7A3 348 aaKnown RBP9.03□□□□□ -0.96
CAB39-206ENST00000493540 TXNRD3Q86VQ6 643 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 ANKRD18AQ8IVF6 992 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 CDC5LQ99459 802 aaKnown RBP9.03□□□□□ -0.96
CAB39-206ENST00000493540 GREM2Q9H772 168 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 MAP3K2Q9Y2U5 619 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 AK9Q5TCS8 1911 aa9.03□□□□□ -0.96
CAB39-206ENST00000493540 DOCK1Q14185 1865 aa9.02□□□□□ -0.96
CAB39-206ENST00000493540 PI4KAP2A4QPH2 592 aa9.02□□□□□ -0.97
CAB39-206ENST00000493540 KLRK1P26718 216 aa9.02□□□□□ -0.97
CAB39-206ENST00000493540 CCT4P50991 539 aaKnown RBP9.02□□□□□ -0.97
CAB39-206ENST00000493540 DDX10Q13206 875 aaKnown RBP9.02□□□□□ -0.97
CAB39-206ENST00000493540 SKIV2LQ15477 1246 aaKnown RBP9.02□□□□□ -0.97
CAB39-206ENST00000493540 NBPF9Q3BBW0 867 aa9.02□□□□□ -0.97
CAB39-206ENST00000493540 SH3D19Q5HYK7 790 aa9.02□□□□□ -0.97
CAB39-206ENST00000493540 LDLRAD1Q5T700 205 aa9.02□□□□□ -0.97
CAB39-206ENST00000493540 CCDC30Q5VVM6 783 aa9.02□□□□□ -0.97
CAB39-206ENST00000493540 PI4KAP1Q8N8J0 262 aa9.02□□□□□ -0.97
CAB39-206ENST00000493540 MTMR14Q8NCE2 650 aa9.02□□□□□ -0.97
CAB39-206ENST00000493540 COA1Q9GZY4 146 aa9.02□□□□□ -0.97
CAB39-206ENST00000493540 ANKIB1Q9P2G1 1089 aa9.02□□□□□ -0.97
CAB39-206ENST00000493540 LAS1LQ9Y4W2 734 aaKnown RBP9.02□□□□□ -0.97
CAB39-206ENST00000493540 TRPA1O75762 1119 aa9.01□□□□□ -0.97
CAB39-206ENST00000493540 DDX58O95786 925 aaKnown RBP9.01□□□□□ -0.97
CAB39-206ENST00000493540 GCKRQ14397 625 aa9.01□□□□□ -0.97
CAB39-206ENST00000493540 CWF19L2Q2TBE0 894 aaKnown RBP9.01□□□□□ -0.97
CAB39-206ENST00000493540 MYSM1Q5VVJ2 828 aa9.01□□□□□ -0.97
CAB39-206ENST00000493540 MOB2Q70IA6 237 aa9.01□□□□□ -0.97
CAB39-206ENST00000493540 CHMP4AQ9BY43 222 aa9.01□□□□□ -0.97
CAB39-206ENST00000493540 LEMD3Q9Y2U8 911 aa9.01□□□□□ -0.97
CAB39-206ENST00000493540 LOC285556D6RIA3 1793 aa9.01□□□□□ -0.97
CAB39-206ENST00000493540 UNCXA6NJT0 531 aa9□□□□□ -0.97
CAB39-206ENST00000493540 ACTN4O43707 911 aaKnown RBP9□□□□□ -0.97
CAB39-206ENST00000493540 FKBP1AP62942 108 aaKnown RBP9□□□□□ -0.97
CAB39-206ENST00000493540 PKN2Q16513 984 aaKnown RBP9□□□□□ -0.97
CAB39-206ENST00000493540 NYAP1Q6ZVC0 841 aa9□□□□□ -0.97
CAB39-206ENST00000493540 G2E3Q7L622 706 aa9□□□□□ -0.97
CAB39-206ENST00000493540 WWC1Q8IX03 1113 aa9□□□□□ -0.97
CAB39-206ENST00000493540 CERS5Q8N5B7 392 aa9□□□□□ -0.97
CAB39-206ENST00000493540 HCSTQ9UBK5 93 aa9□□□□□ -0.97
CAB39-206ENST00000493540 ZNF804BA4D1E1 1349 aa9□□□□□ -0.97
CAB39-206ENST00000493540 MYO5AQ9Y4I1 1855 aaKnown RBP9□□□□□ -0.97
CAB39-206ENST00000493540 SIPA1L1O43166 1804 aa8.99□□□□□ -0.97
CAB39-206ENST00000493540 FRMPD3Q5JV73 1810 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms