RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 OSBP2Q969R2 916 aa13.89□□□□□ -0.19
LSM2-214ENST00000493387 PRMT6Q96LA8 375 aaPredicted RBP13.89□□□□□ -0.19
LSM2-214ENST00000493387 TAF1DQ9H5J8 278 aaPredicted RBP13.89□□□□□ -0.19
LSM2-214ENST00000493387 WDR90Q96KV7 1748 aa13.89□□□□□ -0.19
LSM2-214ENST00000493387 MAST2Q6P0Q8 1798 aa13.88□□□□□ -0.19
LSM2-214ENST00000493387 SCN4AP35499 1836 aa13.88□□□□□ -0.19
LSM2-214ENST00000493387 SHTN1A0MZ66 631 aa13.88□□□□□ -0.19
LSM2-214ENST00000493387 WNT10BO00744 389 aa13.88□□□□□ -0.19
LSM2-214ENST00000493387 FKBP1CQ5VVH2 108 aa13.88□□□□□ -0.19
LSM2-214ENST00000493387 CWC27Q6UX04 472 aaKnown RBP13.88□□□□□ -0.19
LSM2-214ENST00000493387 ADGRA1Q86SQ6 560 aa13.88□□□□□ -0.19
LSM2-214ENST00000493387 MIGA1Q8NAN2 632 aa13.88□□□□□ -0.19
LSM2-214ENST00000493387 ZC3H15Q8WU90 426 aaKnown RBP13.88□□□□□ -0.19
LSM2-214ENST00000493387 CRNKL1Q9BZJ0 848 aaKnown RBP13.88□□□□□ -0.19
LSM2-214ENST00000493387 PUS7LQ9H0K6 701 aaKnown RBP13.88□□□□□ -0.19
LSM2-214ENST00000493387 RRAGCQ9HB90 399 aa13.88□□□□□ -0.19
LSM2-214ENST00000493387 USP40Q9NVE5 1235 aa13.88□□□□□ -0.19
LSM2-214ENST00000493387 AATFQ9NY61 560 aaKnown RBP eCLIP13.88□□□□□ -0.19
LSM2-214ENST00000493387 MYH7P12883 1935 aa13.88□□□□□ -0.19
LSM2-214ENST00000493387 AK9Q5TCS8 1911 aa13.88□□□□□ -0.19
LSM2-214ENST00000493387 MYH2Q9UKX2 1941 aa13.88□□□□□ -0.19
LSM2-214ENST00000493387 RPAP1Q9BWH6 1393 aaPredicted RBP13.87□□□□□ -0.19
LSM2-214ENST00000493387 MYO5AQ9Y4I1 1855 aaKnown RBP13.87□□□□□ -0.19
LSM2-214ENST00000493387 POTECB2RU33 542 aa13.87□□□□□ -0.19
LSM2-214ENST00000493387 NPM3O75607 178 aaKnown RBP13.87□□□□□ -0.19
LSM2-214ENST00000493387 MBD4O95243 580 aa13.87□□□□□ -0.19
LSM2-214ENST00000493387 SPDYE2Q495Y8 402 aa13.87□□□□□ -0.19
LSM2-214ENST00000493387 CDC42EP5Q6NZY7 148 aa13.87□□□□□ -0.19
LSM2-214ENST00000493387 TRPM4Q8TD43 1214 aa13.87□□□□□ -0.19
LSM2-214ENST00000493387 FAM227BQ96M60 508 aa13.87□□□□□ -0.19
LSM2-214ENST00000493387 STRBPQ96SI9 672 aaKnown RBP13.87□□□□□ -0.19
LSM2-214ENST00000493387 RIOK1Q9BRS2 568 aaKnown RBP13.87□□□□□ -0.19
LSM2-214ENST00000493387 A0A0D9SFI3 127 aa13.86□□□□□ -0.19
LSM2-214ENST00000493387 GPAA1O43292 621 aa13.86□□□□□ -0.19
LSM2-214ENST00000493387 CHGBP05060 677 aa13.86□□□□□ -0.19
LSM2-214ENST00000493387 YY1P25490 414 aa13.86□□□□□ -0.19
LSM2-214ENST00000493387 HOXD11P31277 338 aaPredicted RBP13.86□□□□□ -0.19
LSM2-214ENST00000493387 RHBDL3P58872 404 aa13.86□□□□□ -0.19
LSM2-214ENST00000493387 TNFAIP1Q13829 316 aa13.86□□□□□ -0.19
LSM2-214ENST00000493387 NBPF9Q3BBW0 867 aa13.86□□□□□ -0.19
LSM2-214ENST00000493387 SLFNL1Q499Z3 407 aa13.86□□□□□ -0.19
LSM2-214ENST00000493387 APOBEC3FQ8IUX4 373 aaKnown RBP13.86□□□□□ -0.19
LSM2-214ENST00000493387 TEX11Q8IYF3 940 aa13.86□□□□□ -0.19
LSM2-214ENST00000493387 DDRGK1Q96HY6 314 aa13.86□□□□□ -0.19
LSM2-214ENST00000493387 TDRD3Q9H7E2 651 aaKnown RBP13.86□□□□□ -0.19
LSM2-214ENST00000493387 GPBP1L1Q9HC44 474 aaPredicted RBP13.86□□□□□ -0.19
LSM2-214ENST00000493387 ZNF70Q9UC06 446 aaPredicted RBP13.86□□□□□ -0.19
LSM2-214ENST00000493387 CCDC171Q6TFL3 1326 aa13.86□□□□□ -0.19
LSM2-214ENST00000493387 PITPNM2Q9BZ72 1349 aa13.86□□□□□ -0.19
LSM2-214ENST00000493387 M0R2C6 588 aa13.85□□□□□ -0.19
LSM2-214ENST00000493387 SGSM2O43147 1006 aa13.85□□□□□ -0.19
LSM2-214ENST00000493387 TNNI2P48788 182 aa13.85□□□□□ -0.19
LSM2-214ENST00000493387 HIRAP54198 1017 aaPredicted RBP13.85□□□□□ -0.19
LSM2-214ENST00000493387 DYNLL1P63167 89 aaKnown RBP13.85□□□□□ -0.19
LSM2-214ENST00000493387 GIMAP6Q6P9H5 292 aa13.85□□□□□ -0.19
LSM2-214ENST00000493387 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
LSM2-214ENST00000493387 LCORLQ8N3X6 602 aa13.85□□□□□ -0.19
LSM2-214ENST00000493387 SH3RF3Q8TEJ3 882 aaPredicted RBP13.85□□□□□ -0.19
LSM2-214ENST00000493387 ZNF526Q8TF50 670 aaPredicted RBP13.85□□□□□ -0.19
LSM2-214ENST00000493387 ESYT1Q9BSJ8 1104 aa13.85□□□□□ -0.19
LSM2-214ENST00000493387 IDI2Q9BXS1 227 aa13.85□□□□□ -0.19
LSM2-214ENST00000493387 NACAP1Q9BZK3 213 aa13.85□□□□□ -0.19
LSM2-214ENST00000493387 ARMT1Q9H993 441 aa13.85□□□□□ -0.19
LSM2-214ENST00000493387 ATP8A2Q9NTI2 1148 aa13.85□□□□□ -0.19
LSM2-214ENST00000493387 PGAP2Q9UHJ9 254 aa13.85□□□□□ -0.19
LSM2-214ENST00000493387 PATL2C9JE40 543 aaKnown RBP13.84□□□□□ -0.19
LSM2-214ENST00000493387 ENTPD3O75355 529 aa13.84□□□□□ -0.19
LSM2-214ENST00000493387 EGFRP00533 1210 aa13.84□□□□□ -0.19
LSM2-214ENST00000493387 USP5P45974 858 aa13.84□□□□□ -0.19
LSM2-214ENST00000493387 EAPPQ56P03 285 aaPredicted RBP13.84□□□□□ -0.19
LSM2-214ENST00000493387 FAM83AQ86UY5 434 aa13.84□□□□□ -0.19
LSM2-214ENST00000493387 DCPSQ96C86 337 aaKnown RBP13.84□□□□□ -0.19
LSM2-214ENST00000493387 SEC62Q99442 399 aaKnown RBP13.84□□□□□ -0.19
LSM2-214ENST00000493387 NMRK2Q9NPI5 230 aa13.84□□□□□ -0.19
LSM2-214ENST00000493387 PCDHAC2Q9Y5I4 1007 aa13.84□□□□□ -0.19
LSM2-214ENST00000493387 SLC4A4Q9Y6R1 1079 aa13.84□□□□□ -0.19
LSM2-214ENST00000493387 CLRN2A0PK11 232 aa13.83□□□□□ -0.2
LSM2-214ENST00000493387 WDHD1O75717 1129 aaPredicted RBP13.83□□□□□ -0.2
LSM2-214ENST00000493387 REC8O95072 547 aa13.83□□□□□ -0.2
LSM2-214ENST00000493387 LDHDQ86WU2 507 aa13.83□□□□□ -0.2
LSM2-214ENST00000493387 TGFBRAP1Q8WUH2 860 aa13.83□□□□□ -0.2
LSM2-214ENST00000493387 VEZTQ9HBM0 779 aa13.83□□□□□ -0.2
LSM2-214ENST00000493387 GGA3Q9NZ52 723 aa13.83□□□□□ -0.2
LSM2-214ENST00000493387 CLEC11AQ9Y240 323 aa13.83□□□□□ -0.2
LSM2-214ENST00000493387 PPP2R3BQ9Y5P8 575 aa13.83□□□□□ -0.2
LSM2-214ENST00000493387 APPP05067 770 aa13.82□□□□□ -0.2
LSM2-214ENST00000493387 ALX1Q15699 326 aa13.82□□□□□ -0.2
LSM2-214ENST00000493387 ANGEL2Q5VTE6 544 aaKnown RBP13.82□□□□□ -0.2
LSM2-214ENST00000493387 CCDC129Q6ZRS4 1044 aa13.82□□□□□ -0.2
LSM2-214ENST00000493387 ZNF589Q86UQ0 364 aaPredicted RBP13.82□□□□□ -0.2
LSM2-214ENST00000493387 SULF1Q8IWU6 871 aa13.82□□□□□ -0.2
LSM2-214ENST00000493387 AMOTL1Q8IY63 956 aa13.82□□□□□ -0.2
LSM2-214ENST00000493387 FAM151AQ8WW52 585 aa13.82□□□□□ -0.2
LSM2-214ENST00000493387 DSCC1Q9BVC3 393 aa13.82□□□□□ -0.2
LSM2-214ENST00000493387 GSG1L2A8MUP6 293 aa13.81□□□□□ -0.2
LSM2-214ENST00000493387 TCP10L2B9ZVM9 353 aa13.81□□□□□ -0.2
LSM2-214ENST00000493387 EPB41L2O43491 1005 aaKnown RBP13.81□□□□□ -0.2
LSM2-214ENST00000493387 HSPD1P10809 573 aaKnown RBP13.81□□□□□ -0.2
LSM2-214ENST00000493387 DHX36Q9H2U1 1008 aaKnown RBP13.81□□□□□ -0.2
LSM2-214ENST00000493387 DCP1AQ9NPI6 582 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms