RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 HMG20BQ9P0W2 317 aa11.05□□□□□ -0.64
TM4SF1-203ENST00000493298 MAST2Q6P0Q8 1798 aa11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 CYP2E1P05181 493 aaPredicted RBP11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 SLC10A3P09131 477 aa11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 CHMLP26374 656 aa11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 ZAP70P43403 619 aa11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 RASGRF1Q13972 1273 aa11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 SPDYE2Q495Y8 402 aa11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 LDLRAD1Q5T700 205 aa11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 RASAL3Q86YV0 1011 aa11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 OGFOD1Q8N543 542 aa11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 FBXW7Q969H0 707 aa11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 SERPINA10Q9UK55 444 aa11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 FZD1Q9UP38 647 aa11.04□□□□□ -0.64
TM4SF1-203ENST00000493298 RFX7Q2KHR2 1363 aa11.03□□□□□ -0.64
TM4SF1-203ENST00000493298 F8W031 263 aaPredicted RBP11.03□□□□□ -0.64
TM4SF1-203ENST00000493298 GLRX3O76003 335 aaKnown RBP11.03□□□□□ -0.64
TM4SF1-203ENST00000493298 FKBP1BP68106 108 aa11.03□□□□□ -0.64
TM4SF1-203ENST00000493298 MAP3K11Q16584 847 aa11.03□□□□□ -0.64
TM4SF1-203ENST00000493298 APOBEC3HQ6NTF7 200 aaKnown RBP11.03□□□□□ -0.64
TM4SF1-203ENST00000493298 RGMBQ6NW40 437 aa11.03□□□□□ -0.64
TM4SF1-203ENST00000493298 PRDM10Q9NQV6 1147 aa11.03□□□□□ -0.64
TM4SF1-203ENST00000493298 AKAP2Q9Y2D5 859 aa11.03□□□□□ -0.64
TM4SF1-203ENST00000493298 AK9Q5TCS8 1911 aa11.03□□□□□ -0.64
TM4SF1-203ENST00000493298 CLRN2A0PK11 232 aa11.02□□□□□ -0.65
TM4SF1-203ENST00000493298 ECE1P42892 770 aa11.02□□□□□ -0.65
TM4SF1-203ENST00000493298 LBX1P52954 281 aa11.02□□□□□ -0.65
TM4SF1-203ENST00000493298 DLGAP5Q15398 846 aa11.02□□□□□ -0.65
TM4SF1-203ENST00000493298 MRIQ9BWK5 157 aa11.02□□□□□ -0.65
TM4SF1-203ENST00000493298 DEFB129Q9H1M3 183 aa11.02□□□□□ -0.65
TM4SF1-203ENST00000493298 TTF2Q9UNY4 1162 aaKnown RBP11.02□□□□□ -0.65
TM4SF1-203ENST00000493298 SALL1Q9NSC2 1324 aa11.02□□□□□ -0.65
TM4SF1-203ENST00000493298 UBE2Q2LH0YL09 131 aa11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 FOXP2O15409 715 aa11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 SLC5A1P13866 664 aa11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 PRDX5P30044 214 aa11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 CRKP46108 304 aa11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 HDLBPQ00341 1268 aaKnown RBP11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 MAP2K1Q02750 393 aaPredicted RBP11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 NOGQ13253 232 aa11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 NBPF12Q5TAG4 269 aaPredicted RBP11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 APOBEC3FQ8IUX4 373 aaKnown RBP11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 C2orf69Q8N8R5 385 aa11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 ZDHHC15Q96MV8 337 aa11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 CSRNP1Q96S65 589 aa11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 ZNF70Q9UC06 446 aaPredicted RBP11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 HDAC9Q9UKV0 1011 aa11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 PDS5AQ29RF7 1337 aaKnown RBP11.01□□□□□ -0.65
TM4SF1-203ENST00000493298 ATAD5Q96QE3 1844 aa11□□□□□ -0.65
TM4SF1-203ENST00000493298 TCRBV5S4A2TA0A5A2 114 aa11□□□□□ -0.65
TM4SF1-203ENST00000493298 GOLIM4O00461 696 aa11□□□□□ -0.65
TM4SF1-203ENST00000493298 IFIT1P09914 478 aaKnown RBP11□□□□□ -0.65
TM4SF1-203ENST00000493298 CTCFP49711 727 aaPredicted RBP11□□□□□ -0.65
TM4SF1-203ENST00000493298 FAM227BQ96M60 508 aa11□□□□□ -0.65
TM4SF1-203ENST00000493298 SEC62Q99442 399 aaKnown RBP11□□□□□ -0.65
TM4SF1-203ENST00000493298 TDRD3Q9H7E2 651 aaKnown RBP11□□□□□ -0.65
TM4SF1-203ENST00000493298 TSKSQ9UJT2 592 aa11□□□□□ -0.65
TM4SF1-203ENST00000493298 SUGT1Q9Y2Z0 365 aa11□□□□□ -0.65
TM4SF1-203ENST00000493298 ATRNL1Q5VV63 1379 aa11□□□□□ -0.65
TM4SF1-203ENST00000493298 DDX60LQ5H9U9 1706 aaKnown RBP10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 A0A0D9SFI3 127 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 GJA5P36382 358 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 ZNF157P51786 506 aaPredicted RBP10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 KIF23Q02241 960 aaPredicted RBP10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 CHAF1AQ13111 956 aaPredicted RBP10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 GRM1Q13255 1194 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 COL9A3Q14050 684 aaPredicted RBP10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 RASA3Q14644 834 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 CAVIN4Q5BKX8 364 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 ADGRA1Q86SQ6 560 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 KBTBD3Q8NAB2 608 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 SPATA5Q8NB90 893 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 TBC1D22AQ8WUA7 517 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 CCDC102AQ96A19 550 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 CLMNQ96JQ2 1002 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 PAG1Q9NWQ8 432 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 PPP2R3BQ9Y5P8 575 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 ZSWIM8A7E2V4 1837 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 MYH7P12883 1935 aa10.99□□□□□ -0.65
TM4SF1-203ENST00000493298 ERC2O15083 957 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 CDC45O75419 566 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 USP2O75604 605 aaPredicted RBP10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 CACNB3P54284 484 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 NMIQ13287 307 aaPredicted RBP10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 DIXDC1Q155Q3 683 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 TTC39AQ5SRH9 613 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 HHIPL2Q6UWX4 724 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 PAXIP1Q6ZW49 1069 aaPredicted RBP10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 ZNF589Q86UQ0 364 aaPredicted RBP10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 RILPL2Q969X0 211 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 EVI5LQ96CN4 794 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 DNAJC2Q99543 621 aaKnown RBP10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 KIF2CQ99661 725 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 ESYT1Q9BSJ8 1104 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 TMEM39BQ9GZU3 492 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 RNF186Q9NXI6 227 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 DAGLAQ9Y4D2 1042 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 GAKO14976 1311 aa10.98□□□□□ -0.65
TM4SF1-203ENST00000493298 RPAP1Q9BWH6 1393 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms