RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 FAM163AQ96GL9 167 aaPredicted RBP14.19□□□□□ -0.14
LRTM1-202ENST00000493075 NEUROD6Q96NK8 337 aa14.19□□□□□ -0.14
LRTM1-202ENST00000493075 GPR108Q9NPR9 543 aa14.19□□□□□ -0.14
LRTM1-202ENST00000493075 TESPA1A2RU30 521 aaPredicted RBP14.18□□□□□ -0.14
LRTM1-202ENST00000493075 TBC1D8O95759 1140 aa14.18□□□□□ -0.14
LRTM1-202ENST00000493075 RLBP1P12271 317 aa14.18□□□□□ -0.14
LRTM1-202ENST00000493075 DIXDC1Q155Q3 683 aa14.18□□□□□ -0.14
LRTM1-202ENST00000493075 CDC42EP5Q6NZY7 148 aa14.18□□□□□ -0.14
LRTM1-202ENST00000493075 IFNL1Q8IU54 200 aa14.18□□□□□ -0.14
LRTM1-202ENST00000493075 ITPRIPQ8IWB1 547 aa14.18□□□□□ -0.14
LRTM1-202ENST00000493075 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.18□□□□□ -0.14
LRTM1-202ENST00000493075 NOP58Q9Y2X3 529 aaKnown RBP14.18□□□□□ -0.14
LRTM1-202ENST00000493075 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.18□□□□□ -0.14
LRTM1-202ENST00000493075 RPAP1Q9BWH6 1393 aaPredicted RBP14.18□□□□□ -0.14
LRTM1-202ENST00000493075 GAKO14976 1311 aa14.18□□□□□ -0.14
LRTM1-202ENST00000493075 GPR25O00155 361 aa14.17□□□□□ -0.14
LRTM1-202ENST00000493075 GJA5P36382 358 aa14.17□□□□□ -0.14
LRTM1-202ENST00000493075 GORABQ5T7V8 394 aa14.17□□□□□ -0.14
LRTM1-202ENST00000493075 DCAF15Q66K64 600 aa14.17□□□□□ -0.14
LRTM1-202ENST00000493075 OTUD7BQ6GQQ9 843 aa14.17□□□□□ -0.14
LRTM1-202ENST00000493075 USP40Q9NVE5 1235 aa14.17□□□□□ -0.14
LRTM1-202ENST00000493075 CSADQ9Y600 493 aa14.17□□□□□ -0.14
LRTM1-202ENST00000493075 ARAP2Q8WZ64 1704 aa14.17□□□□□ -0.14
LRTM1-202ENST00000493075 UQCRFS1P1P0C7P4 283 aa14.16□□□□□ -0.14
LRTM1-202ENST00000493075 ARID4AP29374 1257 aaPredicted RBP14.16□□□□□ -0.14
LRTM1-202ENST00000493075 VGLL4Q14135 290 aa14.16□□□□□ -0.14
LRTM1-202ENST00000493075 CTU1Q7Z7A3 348 aaKnown RBP14.16□□□□□ -0.14
LRTM1-202ENST00000493075 SPATA5Q8NB90 893 aa14.16□□□□□ -0.14
LRTM1-202ENST00000493075 ZNF296Q8WUU4 475 aaPredicted RBP14.16□□□□□ -0.14
LRTM1-202ENST00000493075 OPTNQ96CV9 577 aa14.16□□□□□ -0.14
LRTM1-202ENST00000493075 IDI2Q9BXS1 227 aa14.16□□□□□ -0.14
LRTM1-202ENST00000493075 ELP3Q9H9T3 547 aa14.16□□□□□ -0.14
LRTM1-202ENST00000493075 HMG20BQ9P0W2 317 aa14.16□□□□□ -0.14
LRTM1-202ENST00000493075 ABCF2Q9UG63 623 aa14.16□□□□□ -0.14
LRTM1-202ENST00000493075 ECM29Q5VYK3 1845 aa14.16□□□□□ -0.14
LRTM1-202ENST00000493075 SURF6O75683 361 aaKnown RBP14.15□□□□□ -0.14
LRTM1-202ENST00000493075 PKN2Q16513 984 aaKnown RBP14.15□□□□□ -0.14
LRTM1-202ENST00000493075 ERICH6Q7L0X2 663 aa14.15□□□□□ -0.14
LRTM1-202ENST00000493075 DZIP1Q86YF9 867 aaKnown RBP14.15□□□□□ -0.14
LRTM1-202ENST00000493075 MS4A4AQ96JQ5 239 aa14.15□□□□□ -0.14
LRTM1-202ENST00000493075 ZNF341Q9BYN7 854 aa14.15□□□□□ -0.14
LRTM1-202ENST00000493075 RNF39Q9H2S5 420 aa14.15□□□□□ -0.14
LRTM1-202ENST00000493075 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.15□□□□□ -0.14
LRTM1-202ENST00000493075 FAM198AQ9UFP1 575 aa14.15□□□□□ -0.14
LRTM1-202ENST00000493075 SPDYE5A6NIY4 337 aa14.15□□□□□ -0.15
LRTM1-202ENST00000493075 CCDC85CA6NKD9 419 aa14.15□□□□□ -0.15
LRTM1-202ENST00000493075 IGF2BP3O00425 579 aaKnown RBP eCLIP14.15□□□□□ -0.15
LRTM1-202ENST00000493075 IGSF3O75054 1194 aa14.15□□□□□ -0.15
LRTM1-202ENST00000493075 FKTNO75072 461 aa14.15□□□□□ -0.15
LRTM1-202ENST00000493075 ENTPD3O75355 529 aa14.15□□□□□ -0.15
LRTM1-202ENST00000493075 MAP4K4O95819 1239 aaPredicted RBP14.15□□□□□ -0.15
LRTM1-202ENST00000493075 LDHCP07864 332 aa14.15□□□□□ -0.15
LRTM1-202ENST00000493075 GTF2A2P52657 109 aa14.15□□□□□ -0.15
LRTM1-202ENST00000493075 NFIAQ12857 509 aa14.15□□□□□ -0.15
LRTM1-202ENST00000493075 OS9Q13438 667 aaPredicted RBP14.15□□□□□ -0.15
LRTM1-202ENST00000493075 TNNI3KQ59H18 835 aa14.15□□□□□ -0.15
LRTM1-202ENST00000493075 ERO1BQ86YB8 467 aa14.15□□□□□ -0.15
LRTM1-202ENST00000493075 ZNF512BQ96KM6 892 aaPredicted RBP14.15□□□□□ -0.15
LRTM1-202ENST00000493075 C1orf115Q9H7X2 142 aa14.15□□□□□ -0.15
LRTM1-202ENST00000493075 ZNF112Q9UJU3 913 aa14.15□□□□□ -0.15
LRTM1-202ENST00000493075 FPGT-TNNI3KV9GXZ4 949 aa14.15□□□□□ -0.15
LRTM1-202ENST00000493075 GPR75-ASB3A0A0A6YYF3 556 aa14.14□□□□□ -0.15
LRTM1-202ENST00000493075 GSTO1P78417 241 aa14.14□□□□□ -0.15
LRTM1-202ENST00000493075 MECOMQ03112 1051 aa14.14□□□□□ -0.15
LRTM1-202ENST00000493075 TCP10Q12799 353 aa14.14□□□□□ -0.15
LRTM1-202ENST00000493075 CCDC158Q5M9N0 1113 aa14.14□□□□□ -0.15
LRTM1-202ENST00000493075 CEP85Q6P2H3 762 aa14.14□□□□□ -0.15
LRTM1-202ENST00000493075 PANK1Q8TE04 598 aa14.14□□□□□ -0.15
LRTM1-202ENST00000493075 WRNIP1Q96S55 665 aa14.14□□□□□ -0.15
LRTM1-202ENST00000493075 PTPN18Q99952 460 aa14.14□□□□□ -0.15
LRTM1-202ENST00000493075 R3HDMLQ9H3Y0 253 aa14.14□□□□□ -0.15
LRTM1-202ENST00000493075 SNCAIPQ9Y6H5 919 aa14.14□□□□□ -0.15
LRTM1-202ENST00000493075 RGS19P49795 217 aa14.13□□□□□ -0.15
LRTM1-202ENST00000493075 MAP3K10Q02779 954 aa14.13□□□□□ -0.15
LRTM1-202ENST00000493075 MIGA2Q7L4E1 593 aa14.13□□□□□ -0.15
LRTM1-202ENST00000493075 ZKSCAN4Q969J2 545 aaPredicted RBP14.13□□□□□ -0.15
LRTM1-202ENST00000493075 NSUN4Q96CB9 384 aaKnown RBP14.13□□□□□ -0.15
LRTM1-202ENST00000493075 MROH7-TTC4A0A0A0MT08 1334 aa14.12□□□□□ -0.15
LRTM1-202ENST00000493075 MCAMP43121 646 aa14.12□□□□□ -0.15
LRTM1-202ENST00000493075 BTDP43251 543 aa14.12□□□□□ -0.15
LRTM1-202ENST00000493075 RGS3P49796 1198 aa14.12□□□□□ -0.15
LRTM1-202ENST00000493075 PPATQ06203 517 aa14.12□□□□□ -0.15
LRTM1-202ENST00000493075 PPIL2Q13356 520 aa14.12□□□□□ -0.15
LRTM1-202ENST00000493075 ZFPM1Q8IX07 1006 aa14.12□□□□□ -0.15
LRTM1-202ENST00000493075 ZNF384Q8TF68 577 aa14.12□□□□□ -0.15
LRTM1-202ENST00000493075 BRI3BPQ8WY22 251 aa14.12□□□□□ -0.15
LRTM1-202ENST00000493075 OTUD5Q96G74 571 aa14.12□□□□□ -0.15
LRTM1-202ENST00000493075 DBNDD2Q9BQY9 259 aa14.12□□□□□ -0.15
LRTM1-202ENST00000493075 CHMP4BQ9H444 224 aaKnown RBP14.12□□□□□ -0.15
LRTM1-202ENST00000493075 DDX19BQ9UMR2 479 aa14.12□□□□□ -0.15
LRTM1-202ENST00000493075 CCL15-CCL14A0A0B4J2E2 113 aa14.11□□□□□ -0.15
LRTM1-202ENST00000493075 WDHD1O75717 1129 aaPredicted RBP14.11□□□□□ -0.15
LRTM1-202ENST00000493075 CETPP11597 493 aa14.11□□□□□ -0.15
LRTM1-202ENST00000493075 RHBDL3P58872 404 aa14.11□□□□□ -0.15
LRTM1-202ENST00000493075 CCL15Q16663 113 aa14.11□□□□□ -0.15
LRTM1-202ENST00000493075 HSP90AB4PQ58FF6 505 aa14.11□□□□□ -0.15
LRTM1-202ENST00000493075 TTC39AQ5SRH9 613 aa14.11□□□□□ -0.15
LRTM1-202ENST00000493075 NOL9Q5SY16 702 aaKnown RBP14.11□□□□□ -0.15
LRTM1-202ENST00000493075 PI16Q6UXB8 463 aa14.11□□□□□ -0.15
LRTM1-202ENST00000493075 TBC1D9Q6ZT07 1266 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms