RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 UNCXA6NJT0 531 aa13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 PPP1R12BO60237 982 aaPredicted RBP13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 CYP2E1P05181 493 aaPredicted RBP13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 LDHCP07864 332 aa13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 MAP2K2P36507 400 aa13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 NOGQ13253 232 aa13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 GRM1Q13255 1194 aa13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 MAP3K11Q16584 847 aa13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 TBC1D9Q6ZT07 1266 aa13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 CCDC102AQ96A19 550 aa13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 NSUN4Q96CB9 384 aaKnown RBP13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 SNRKQ9NRH2 765 aa13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 RAI14Q9P0K7 980 aa13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 LRP2BPQ9P2M1 347 aa13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 PCDHB15Q9Y5E8 787 aa13.02□□□□□ -0.33
CDC42SE1-206ENST00000492796 MAP4K4O95819 1239 aaPredicted RBP13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 SLC10A3P09131 477 aa13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 ZAP70P43403 619 aa13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 ZNF157P51786 506 aaPredicted RBP13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 CACNB3P54284 484 aa13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 MAP2K1Q02750 393 aaPredicted RBP13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 NBPF12Q5TAG4 269 aaPredicted RBP13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 CDC42EP5Q6NZY7 148 aa13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 TMED8Q6PL24 325 aaPredicted RBP13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 HOOK2Q96ED9 719 aa13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 TEPSINQ96N21 525 aa13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 TMEM39BQ9GZU3 492 aa13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 ANGEL1Q9UNK9 670 aaKnown RBP13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 RFX7Q2KHR2 1363 aa13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 MYO5AQ9Y4I1 1855 aaKnown RBP13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 OTOFQ9HC10 1997 aa13.01□□□□□ -0.33
CDC42SE1-206ENST00000492796 LAMB1P07942 1786 aa13□□□□□ -0.33
CDC42SE1-206ENST00000492796 GPR75-ASB3A0A0A6YYF3 556 aa13□□□□□ -0.33
CDC42SE1-206ENST00000492796 FAM155AB1AL88 458 aaPredicted RBP13□□□□□ -0.33
CDC42SE1-206ENST00000492796 HSPA1AP0DMV8 641 aaKnown RBP13□□□□□ -0.33
CDC42SE1-206ENST00000492796 HSPA1BP0DMV9 641 aaKnown RBP13□□□□□ -0.33
CDC42SE1-206ENST00000492796 BTDP43251 543 aa13□□□□□ -0.33
CDC42SE1-206ENST00000492796 IREB2P48200 963 aaKnown RBP13□□□□□ -0.33
CDC42SE1-206ENST00000492796 MOB2Q70IA6 237 aa13□□□□□ -0.33
CDC42SE1-206ENST00000492796 RASAL3Q86YV0 1011 aa13□□□□□ -0.33
CDC42SE1-206ENST00000492796 ZNF384Q8TF68 577 aa13□□□□□ -0.33
CDC42SE1-206ENST00000492796 FAM151AQ8WW52 585 aa13□□□□□ -0.33
CDC42SE1-206ENST00000492796 IDI2Q9BXS1 227 aa13□□□□□ -0.33
CDC42SE1-206ENST00000492796 USP40Q9NVE5 1235 aa13□□□□□ -0.33
CDC42SE1-206ENST00000492796 UBE2Q2LH0YL09 131 aa12.99□□□□□ -0.33
CDC42SE1-206ENST00000492796 AOC2O75106 756 aa12.99□□□□□ -0.33
CDC42SE1-206ENST00000492796 PRKG1Q13976 671 aa12.99□□□□□ -0.33
CDC42SE1-206ENST00000492796 TTF1Q15361 905 aaPredicted RBP12.99□□□□□ -0.33
CDC42SE1-206ENST00000492796 LDLRAD1Q5T700 205 aa12.99□□□□□ -0.33
CDC42SE1-206ENST00000492796 AIDAQ96BJ3 306 aa12.99□□□□□ -0.33
CDC42SE1-206ENST00000492796 NOL10Q9BSC4 688 aaKnown RBP12.99□□□□□ -0.33
CDC42SE1-206ENST00000492796 SUPT16HQ9Y5B9 1047 aaKnown RBP12.99□□□□□ -0.33
CDC42SE1-206ENST00000492796 FOCADQ5VW36 1801 aa12.99□□□□□ -0.33
CDC42SE1-206ENST00000492796 ENTPD3O75355 529 aa12.98□□□□□ -0.33
CDC42SE1-206ENST00000492796 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
CDC42SE1-206ENST00000492796 NFIAQ12857 509 aa12.98□□□□□ -0.33
CDC42SE1-206ENST00000492796 HDAC1Q13547 482 aaPredicted RBP12.98□□□□□ -0.33
CDC42SE1-206ENST00000492796 NAA16Q6N069 864 aaPredicted RBP12.98□□□□□ -0.33
CDC42SE1-206ENST00000492796 REM2Q8IYK8 340 aaPredicted RBP12.98□□□□□ -0.33
CDC42SE1-206ENST00000492796 PIH1D3Q9NQM4 214 aaKnown RBP12.98□□□□□ -0.33
CDC42SE1-206ENST00000492796 WBP1LQ9NX94 342 aa12.98□□□□□ -0.33
CDC42SE1-206ENST00000492796 COL2A1P02458 1487 aaPredicted RBP12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 SMARCA5O60264 1052 aaPredicted RBP12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 USP2O75604 605 aaPredicted RBP12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 WDHD1O75717 1129 aaPredicted RBP12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 IDH1O75874 414 aaKnown RBP12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 BAG3O95817 575 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 PLCG2P16885 1265 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 ATP5JP18859 108 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 RHBDL3P58872 404 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 MAP3K12Q12852 859 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 DCAF15Q66K64 600 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 CERS3Q8IU89 383 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 CDAN1Q8IWY9 1227 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 ANKRD13AQ8IZ07 590 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 GPATCH3Q96I76 525 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 BEGAINQ9BUH8 593 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 FAM198AQ9UFP1 575 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 FZD1Q9UP38 647 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 CDK5RAP2Q96SN8 1893 aa12.97□□□□□ -0.33
CDC42SE1-206ENST00000492796 AK9Q5TCS8 1911 aa12.96□□□□□ -0.33
CDC42SE1-206ENST00000492796 CA12O43570 354 aa12.96□□□□□ -0.33
CDC42SE1-206ENST00000492796 RGS3P49796 1198 aa12.96□□□□□ -0.33
CDC42SE1-206ENST00000492796 PPP4CP60510 307 aa12.96□□□□□ -0.33
CDC42SE1-206ENST00000492796 TCP10Q12799 353 aa12.96□□□□□ -0.33
CDC42SE1-206ENST00000492796 GCC1Q96CN9 775 aa12.96□□□□□ -0.33
CDC42SE1-206ENST00000492796 BCL11AQ9H165 835 aa12.96□□□□□ -0.33
CDC42SE1-206ENST00000492796 ANTXR1Q9H6X2 564 aa12.96□□□□□ -0.33
CDC42SE1-206ENST00000492796 NDUFB9Q9Y6M9 179 aa12.96□□□□□ -0.33
CDC42SE1-206ENST00000492796 MYH7P12883 1935 aa12.96□□□□□ -0.34
CDC42SE1-206ENST00000492796 ATRNL1Q5VV63 1379 aa12.95□□□□□ -0.34
CDC42SE1-206ENST00000492796 GOLIM4O00461 696 aa12.95□□□□□ -0.34
CDC42SE1-206ENST00000492796 ZBTB48P10074 688 aaPredicted RBP12.95□□□□□ -0.34
CDC42SE1-206ENST00000492796 KIF23Q02241 960 aaPredicted RBP12.95□□□□□ -0.34
CDC42SE1-206ENST00000492796 PICALMQ13492 652 aa12.95□□□□□ -0.34
CDC42SE1-206ENST00000492796 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDC42SE1-206ENST00000492796 SLC10A4Q96EP9 437 aa12.95□□□□□ -0.34
CDC42SE1-206ENST00000492796 DNAJC2Q99543 621 aaKnown RBP12.95□□□□□ -0.34
CDC42SE1-206ENST00000492796 HAUS7Q99871 368 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms