RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 ANGEL1Q9UNK9 670 aaKnown RBP19.57■□□□□ 0.72
PKP4-214ENST00000492496 GAKO14976 1311 aa19.56■□□□□ 0.72
PKP4-214ENST00000492496 RAB11FIP3O75154 756 aa19.56■□□□□ 0.72
PKP4-214ENST00000492496 CTCFP49711 727 aaPredicted RBP19.56■□□□□ 0.72
PKP4-214ENST00000492496 PRKG1Q13976 671 aa19.56■□□□□ 0.72
PKP4-214ENST00000492496 KIF1BPQ96EK5 621 aa19.56■□□□□ 0.72
PKP4-214ENST00000492496 DBNLQ9UJU6 430 aaKnown RBP19.56■□□□□ 0.72
PKP4-214ENST00000492496 AK9Q5TCS8 1911 aa19.56■□□□□ 0.72
PKP4-214ENST00000492496 MAST2Q6P0Q8 1798 aa19.55■□□□□ 0.72
PKP4-214ENST00000492496 CACNB3P54284 484 aa19.55■□□□□ 0.72
PKP4-214ENST00000492496 CDC42EP5Q6NZY7 148 aa19.55■□□□□ 0.72
PKP4-214ENST00000492496 PI16Q6UXB8 463 aa19.55■□□□□ 0.72
PKP4-214ENST00000492496 REM2Q8IYK8 340 aaPredicted RBP19.55■□□□□ 0.72
PKP4-214ENST00000492496 TMEM39BQ9GZU3 492 aa19.55■□□□□ 0.72
PKP4-214ENST00000492496 CCDC8Q9H0W5 538 aaPredicted RBP19.55■□□□□ 0.72
PKP4-214ENST00000492496 MYO5AQ9Y4I1 1855 aaKnown RBP19.55■□□□□ 0.72
PKP4-214ENST00000492496 OTOFQ9HC10 1997 aa19.55■□□□□ 0.72
PKP4-214ENST00000492496 RPAP1Q9BWH6 1393 aaPredicted RBP19.55■□□□□ 0.72
PKP4-214ENST00000492496 LAMB1P07942 1786 aa19.55■□□□□ 0.72
PKP4-214ENST00000492496 CA12O43570 354 aa19.54■□□□□ 0.72
PKP4-214ENST00000492496 IGSF3O75054 1194 aa19.54■□□□□ 0.72
PKP4-214ENST00000492496 KIF23Q02241 960 aaPredicted RBP19.54■□□□□ 0.72
PKP4-214ENST00000492496 MECOMQ03112 1051 aa19.54■□□□□ 0.72
PKP4-214ENST00000492496 CLASRPQ8N2M8 674 aaKnown RBP19.54■□□□□ 0.72
PKP4-214ENST00000492496 HOOK2Q96ED9 719 aa19.54■□□□□ 0.72
PKP4-214ENST00000492496 ZIC5Q96T25 663 aa19.54■□□□□ 0.72
PKP4-214ENST00000492496 MROH7-TTC4A0A0A0MT08 1334 aa19.53■□□□□ 0.72
PKP4-214ENST00000492496 USP2O75604 605 aaPredicted RBP19.53■□□□□ 0.72
PKP4-214ENST00000492496 LDHCP07864 332 aa19.53■□□□□ 0.72
PKP4-214ENST00000492496 IREB2P48200 963 aaKnown RBP19.53■□□□□ 0.72
PKP4-214ENST00000492496 GSTO1P78417 241 aa19.53■□□□□ 0.72
PKP4-214ENST00000492496 AACSQ86V21 672 aa19.53■□□□□ 0.72
PKP4-214ENST00000492496 FAM151AQ8WW52 585 aa19.53■□□□□ 0.72
PKP4-214ENST00000492496 USP40Q9NVE5 1235 aa19.53■□□□□ 0.72
PKP4-214ENST00000492496 TLR7Q9NYK1 1049 aaKnown RBP19.53■□□□□ 0.72
PKP4-214ENST00000492496 TBC1D9Q6ZT07 1266 aa19.52■□□□□ 0.72
PKP4-214ENST00000492496 ZNF384Q8TF68 577 aa19.52■□□□□ 0.72
PKP4-214ENST00000492496 NSUN4Q96CB9 384 aaKnown RBP19.52■□□□□ 0.72
PKP4-214ENST00000492496 IL1RAPL2Q9NP60 686 aa19.52■□□□□ 0.72
PKP4-214ENST00000492496 PRDM10Q9NQV6 1147 aa19.52■□□□□ 0.72
PKP4-214ENST00000492496 LRP2BPQ9P2M1 347 aa19.52■□□□□ 0.72
PKP4-214ENST00000492496 FZD1Q9UP38 647 aa19.52■□□□□ 0.72
PKP4-214ENST00000492496 PCNTO95613 3336 aa19.52■□□□□ 0.72
PKP4-214ENST00000492496 GPR75-ASB3A0A0A6YYF3 556 aa19.51■□□□□ 0.71
PKP4-214ENST00000492496 HSPA8P11142 646 aaKnown RBP19.51■□□□□ 0.71
PKP4-214ENST00000492496 CDAN1Q8IWY9 1227 aa19.51■□□□□ 0.71
PKP4-214ENST00000492496 ANKRD13AQ8IZ07 590 aa19.51■□□□□ 0.71
PKP4-214ENST00000492496 SLC10A4Q96EP9 437 aa19.51■□□□□ 0.71
PKP4-214ENST00000492496 SNRKQ9NRH2 765 aa19.51■□□□□ 0.71
PKP4-214ENST00000492496 RAI14Q9P0K7 980 aa19.51■□□□□ 0.71
PKP4-214ENST00000492496 DOCK2Q92608 1830 aa19.51■□□□□ 0.71
PKP4-214ENST00000492496 APBB1O00213 710 aa19.5■□□□□ 0.71
PKP4-214ENST00000492496 MAP4K4O95819 1239 aaPredicted RBP19.5■□□□□ 0.71
PKP4-214ENST00000492496 CYP2E1P05181 493 aaPredicted RBP19.5■□□□□ 0.71
PKP4-214ENST00000492496 BTDP43251 543 aa19.5■□□□□ 0.71
PKP4-214ENST00000492496 ZAP70P43403 619 aa19.5■□□□□ 0.71
PKP4-214ENST00000492496 CSRNP1Q96S65 589 aa19.5■□□□□ 0.71
PKP4-214ENST00000492496 IDI2Q9BXS1 227 aa19.5■□□□□ 0.71
PKP4-214ENST00000492496 RFX7Q2KHR2 1363 aa19.49■□□□□ 0.71
PKP4-214ENST00000492496 NFIAQ12857 509 aa19.49■□□□□ 0.71
PKP4-214ENST00000492496 FAM198AQ9UFP1 575 aa19.49■□□□□ 0.71
PKP4-214ENST00000492496 ENTPD3O75355 529 aa19.48■□□□□ 0.71
PKP4-214ENST00000492496 IFIT2P09913 472 aaKnown RBP19.48■□□□□ 0.71
PKP4-214ENST00000492496 ZBTB48P10074 688 aaPredicted RBP19.48■□□□□ 0.71
PKP4-214ENST00000492496 LBX1P52954 281 aa19.48■□□□□ 0.71
PKP4-214ENST00000492496 TCP10Q12799 353 aa19.48■□□□□ 0.71
PKP4-214ENST00000492496 COL13A1Q5TAT6 717 aaPredicted RBP19.48■□□□□ 0.71
PKP4-214ENST00000492496 SPRYD7Q5W111 196 aa19.48■□□□□ 0.71
PKP4-214ENST00000492496 DCAF15Q66K64 600 aa19.48■□□□□ 0.71
PKP4-214ENST00000492496 CLMNQ96JQ2 1002 aa19.48■□□□□ 0.71
PKP4-214ENST00000492496 SAGE1Q9NXZ1 904 aa19.48■□□□□ 0.71
PKP4-214ENST00000492496 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.47■□□□□ 0.71
PKP4-214ENST00000492496 LRRCC1Q9C099 1032 aa19.47■□□□□ 0.71
PKP4-214ENST00000492496 CDK5RAP2Q96SN8 1893 aa19.47■□□□□ 0.71
PKP4-214ENST00000492496 FOCADQ5VW36 1801 aa19.46■□□□□ 0.71
PKP4-214ENST00000492496 WDHD1O75717 1129 aaPredicted RBP19.46■□□□□ 0.71
PKP4-214ENST00000492496 TM4SF4P48230 202 aa19.46■□□□□ 0.71
PKP4-214ENST00000492496 RHBDL3P58872 404 aa19.46■□□□□ 0.71
PKP4-214ENST00000492496 MAP3K9P80192 1104 aa19.46■□□□□ 0.71
PKP4-214ENST00000492496 NAA16Q6N069 864 aaPredicted RBP19.46■□□□□ 0.71
PKP4-214ENST00000492496 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.46■□□□□ 0.71
PKP4-214ENST00000492496 WNK4Q96J92 1243 aa19.46■□□□□ 0.71
PKP4-214ENST00000492496 DCTPP1Q9H773 170 aa19.46■□□□□ 0.71
PKP4-214ENST00000492496 PIH1D3Q9NQM4 214 aaKnown RBP19.46■□□□□ 0.71
PKP4-214ENST00000492496 RGS3P49796 1198 aa19.45■□□□□ 0.7
PKP4-214ENST00000492496 SREBF2Q12772 1141 aa19.45■□□□□ 0.7
PKP4-214ENST00000492496 TMED8Q6PL24 325 aaPredicted RBP19.45■□□□□ 0.7
PKP4-214ENST00000492496 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.45■□□□□ 0.7
PKP4-214ENST00000492496 NOL10Q9BSC4 688 aaKnown RBP19.45■□□□□ 0.7
PKP4-214ENST00000492496 ZNF341Q9BYN7 854 aa19.45■□□□□ 0.7
PKP4-214ENST00000492496 CSADQ9Y600 493 aa19.45■□□□□ 0.7
PKP4-214ENST00000492496 MANSC4A6NHS7 340 aaPredicted RBP19.44■□□□□ 0.7
PKP4-214ENST00000492496 BAG3O95817 575 aa19.44■□□□□ 0.7
PKP4-214ENST00000492496 INHBEP58166 350 aa19.44■□□□□ 0.7
PKP4-214ENST00000492496 MKRN3Q13064 507 aaKnown RBP19.44■□□□□ 0.7
PKP4-214ENST00000492496 VGLL4Q14135 290 aa19.44■□□□□ 0.7
PKP4-214ENST00000492496 CRBNQ96SW2 442 aa19.44■□□□□ 0.7
PKP4-214ENST00000492496 RNF186Q9NXI6 227 aa19.44■□□□□ 0.7
PKP4-214ENST00000492496 PCDHB15Q9Y5E8 787 aa19.44■□□□□ 0.7
PKP4-214ENST00000492496 COL2A1P02458 1487 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms