RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 C22orf23Q9BZE7 217 aa12.89□□□□□ -0.35
ATF3-209ENST00000492118 CCDC171Q6TFL3 1326 aa12.89□□□□□ -0.35
ATF3-209ENST00000492118 FAM205AQ6ZU69 1335 aa12.89□□□□□ -0.35
ATF3-209ENST00000492118 MAGEB6P1A0A0J9YX57 407 aa12.88□□□□□ -0.35
ATF3-209ENST00000492118 MCCP23508 829 aa12.88□□□□□ -0.35
ATF3-209ENST00000492118 UBE3CQ15386 1083 aa12.88□□□□□ -0.35
ATF3-209ENST00000492118 KCTD17Q8N5Z5 321 aa12.88□□□□□ -0.35
ATF3-209ENST00000492118 USP26Q9BXU7 913 aa12.88□□□□□ -0.35
ATF3-209ENST00000492118 LSG1Q9H089 658 aaKnown RBP12.88□□□□□ -0.35
ATF3-209ENST00000492118 HELLSQ9NRZ9 838 aa12.88□□□□□ -0.35
ATF3-209ENST00000492118 DOCK2Q92608 1830 aa12.88□□□□□ -0.35
ATF3-209ENST00000492118 MYH2Q9UKX2 1941 aa12.88□□□□□ -0.35
ATF3-209ENST00000492118 LMNB1P20700 586 aa12.88□□□□□ -0.35
ATF3-209ENST00000492118 RBM26Q5T8P6 1007 aaKnown RBP12.88□□□□□ -0.35
ATF3-209ENST00000492118 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
ATF3-209ENST00000492118 CACNB3P54284 484 aa12.87□□□□□ -0.35
ATF3-209ENST00000492118 HAND2P61296 217 aa12.87□□□□□ -0.35
ATF3-209ENST00000492118 PALD1Q9ULE6 856 aa12.87□□□□□ -0.35
ATF3-209ENST00000492118 SCAF8Q9UPN6 1271 aaKnown RBP12.87□□□□□ -0.35
ATF3-209ENST00000492118 RBM19Q9Y4C8 960 aaKnown RBP12.87□□□□□ -0.35
ATF3-209ENST00000492118 SLC4A4Q9Y6R1 1079 aa12.87□□□□□ -0.35
ATF3-209ENST00000492118 PDS5AQ29RF7 1337 aaKnown RBP12.87□□□□□ -0.35
ATF3-209ENST00000492118 SALL1Q9NSC2 1324 aa12.87□□□□□ -0.35
ATF3-209ENST00000492118 ADAMTSL1Q8N6G6 1762 aa12.87□□□□□ -0.35
ATF3-209ENST00000492118 HSPD1P10809 573 aaKnown RBP12.86□□□□□ -0.35
ATF3-209ENST00000492118 BTDP43251 543 aa12.86□□□□□ -0.35
ATF3-209ENST00000492118 C9orf131Q5VYM1 1079 aa12.86□□□□□ -0.35
ATF3-209ENST00000492118 CIAPIN1Q6FI81 312 aa12.86□□□□□ -0.35
ATF3-209ENST00000492118 SH3RF3Q8TEJ3 882 aaPredicted RBP12.86□□□□□ -0.35
ATF3-209ENST00000492118 RBM8AQ9Y5S9 174 aaKnown RBP12.86□□□□□ -0.35
ATF3-209ENST00000492118 TAF6LQ9Y6J9 622 aa12.86□□□□□ -0.35
ATF3-209ENST00000492118 EIF6P56537 245 aaKnown RBP12.86□□□□□ -0.35
ATF3-209ENST00000492118 RSBN1LQ6PCB5 846 aaPredicted RBP12.86□□□□□ -0.35
ATF3-209ENST00000492118 STRBPQ96SI9 672 aaKnown RBP12.86□□□□□ -0.35
ATF3-209ENST00000492118 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.86□□□□□ -0.35
ATF3-209ENST00000492118 DAGLAQ9Y4D2 1042 aa12.86□□□□□ -0.35
ATF3-209ENST00000492118 SMIM22K7EJ46 135 aa12.85□□□□□ -0.35
ATF3-209ENST00000492118 FOXP2O15409 715 aa12.85□□□□□ -0.35
ATF3-209ENST00000492118 NOL10Q9BSC4 688 aaKnown RBP12.85□□□□□ -0.35
ATF3-209ENST00000492118 RFX7Q2KHR2 1363 aa12.85□□□□□ -0.35
ATF3-209ENST00000492118 MROH7-TTC4A0A0A0MT08 1334 aa12.85□□□□□ -0.35
ATF3-209ENST00000492118 LTBP3Q9NS15 1303 aa12.85□□□□□ -0.35
ATF3-209ENST00000492118 VIL1P09327 827 aaKnown RBP12.85□□□□□ -0.35
ATF3-209ENST00000492118 CRKP46108 304 aa12.85□□□□□ -0.35
ATF3-209ENST00000492118 GSTO1P78417 241 aa12.85□□□□□ -0.35
ATF3-209ENST00000492118 EVX2Q03828 476 aa12.85□□□□□ -0.35
ATF3-209ENST00000492118 PICALMQ13492 652 aa12.85□□□□□ -0.35
ATF3-209ENST00000492118 TEKT1Q969V4 418 aa12.85□□□□□ -0.35
ATF3-209ENST00000492118 RIOK1Q9BRS2 568 aaKnown RBP12.85□□□□□ -0.35
ATF3-209ENST00000492118 RAD50Q92878 1312 aa12.84□□□□□ -0.35
ATF3-209ENST00000492118 CYP2D7A0A087X1C5 515 aa12.84□□□□□ -0.35
ATF3-209ENST00000492118 GMPSP49915 693 aaPredicted RBP12.84□□□□□ -0.35
ATF3-209ENST00000492118 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
ATF3-209ENST00000492118 TGFBRAP1Q8WUH2 860 aa12.84□□□□□ -0.35
ATF3-209ENST00000492118 TBC1D32Q96NH3 1257 aa12.84□□□□□ -0.35
ATF3-209ENST00000492118 SAP30BPQ9UHR5 308 aaKnown RBP12.84□□□□□ -0.35
ATF3-209ENST00000492118 SBF1O95248 1867 aa12.84□□□□□ -0.35
ATF3-209ENST00000492118 DDNO94850 711 aaPredicted RBP12.83□□□□□ -0.35
ATF3-209ENST00000492118 EGFRP00533 1210 aa12.83□□□□□ -0.35
ATF3-209ENST00000492118 FGAP02671 866 aa12.83□□□□□ -0.35
ATF3-209ENST00000492118 TDO2P48775 406 aa12.83□□□□□ -0.35
ATF3-209ENST00000492118 MAPKAPK5Q8IW41 473 aa12.83□□□□□ -0.35
ATF3-209ENST00000492118 OGFOD1Q8N543 542 aa12.83□□□□□ -0.35
ATF3-209ENST00000492118 MAP4K1Q92918 833 aa12.83□□□□□ -0.35
ATF3-209ENST00000492118 EPB41L4AQ9HCS5 686 aaPredicted RBP12.83□□□□□ -0.35
ATF3-209ENST00000492118 BAZ2AQ9UIF9 1905 aaKnown RBP12.83□□□□□ -0.36
ATF3-209ENST00000492118 CLRN2A0PK11 232 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 GSG1L2A8MUP6 293 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 MINDY4BA8MYZ0 360 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 FZD9O00144 591 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 LDHCP07864 332 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 USP17L8P0C7I0 530 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 CPA1P15085 419 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 USP5P45974 858 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 TCP10Q12799 353 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 COL9A3Q14050 684 aaPredicted RBP12.83□□□□□ -0.36
ATF3-209ENST00000492118 TNIP1Q15025 636 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 CFAP100Q494V2 611 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 SAMD7Q7Z3H4 446 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 VPS33BQ9H267 617 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 INCENPQ9NQS7 918 aa12.83□□□□□ -0.36
ATF3-209ENST00000492118 BAG3O95817 575 aa12.82□□□□□ -0.36
ATF3-209ENST00000492118 CREB3L3Q68CJ9 461 aa12.82□□□□□ -0.36
ATF3-209ENST00000492118 TEX11Q8IYF3 940 aa12.82□□□□□ -0.36
ATF3-209ENST00000492118 ZNF526Q8TF50 670 aaPredicted RBP12.82□□□□□ -0.36
ATF3-209ENST00000492118 NAPBQ9H115 298 aa12.82□□□□□ -0.36
ATF3-209ENST00000492118 TDRD3Q9H7E2 651 aaKnown RBP12.82□□□□□ -0.36
ATF3-209ENST00000492118 USP40Q9NVE5 1235 aa12.82□□□□□ -0.36
ATF3-209ENST00000492118 SLC27A2O14975 620 aa12.82□□□□□ -0.36
ATF3-209ENST00000492118 NPM3O75607 178 aaKnown RBP12.82□□□□□ -0.36
ATF3-209ENST00000492118 RBM25P49756 843 aaKnown RBP12.82□□□□□ -0.36
ATF3-209ENST00000492118 CTDSPL2Q05D32 466 aa12.82□□□□□ -0.36
ATF3-209ENST00000492118 TBC1D10BQ4KMP7 808 aaPredicted RBP12.82□□□□□ -0.36
ATF3-209ENST00000492118 NOL8Q76FK4 1167 aaKnown RBP12.82□□□□□ -0.36
ATF3-209ENST00000492118 MICALL2Q8IY33 904 aa12.82□□□□□ -0.36
ATF3-209ENST00000492118 IFNL3Q8IZI9 196 aa12.82□□□□□ -0.36
ATF3-209ENST00000492118 PRMT6Q96LA8 375 aaPredicted RBP12.82□□□□□ -0.36
ATF3-209ENST00000492118 UPF3BQ9BZI7 483 aaKnown RBP12.82□□□□□ -0.36
ATF3-209ENST00000492118 CRNKL1Q9BZJ0 848 aaKnown RBP12.82□□□□□ -0.36
ATF3-209ENST00000492118 PTMAP06454 111 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms