RNA–Protein interactions for RNA: ENST00000491544.1

PCYT1A-216, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-216ENST00000491544 PPP1R42Q7Z4L9 355 aa12.98□□□□□ -0.33
PCYT1A-216ENST00000491544 CCDC191Q8NCU4 936 aa12.98□□□□□ -0.33
PCYT1A-216ENST00000491544 OPTNQ96CV9 577 aa12.98□□□□□ -0.33
PCYT1A-216ENST00000491544 UTP14AQ9BVJ6 771 aaKnown RBP12.98□□□□□ -0.33
PCYT1A-216ENST00000491544 C9orf78Q9NZ63 289 aaPredicted RBP12.98□□□□□ -0.33
PCYT1A-216ENST00000491544 TRMT112Q9UI30 125 aaKnown RBP12.98□□□□□ -0.33
PCYT1A-216ENST00000491544 FMNL1O95466 1100 aaPredicted RBP12.97□□□□□ -0.33
PCYT1A-216ENST00000491544 INHAP05111 366 aa12.97□□□□□ -0.33
PCYT1A-216ENST00000491544 IL27Q8NEV9 243 aa12.97□□□□□ -0.33
PCYT1A-216ENST00000491544 FAM89AQ96GI7 184 aa12.97□□□□□ -0.33
PCYT1A-216ENST00000491544 MEIS3Q99687 375 aa12.97□□□□□ -0.33
PCYT1A-216ENST00000491544 C11orf16Q9NQ32 467 aa12.97□□□□□ -0.33
PCYT1A-216ENST00000491544 GRM8O00222 908 aa12.96□□□□□ -0.33
PCYT1A-216ENST00000491544 WDHD1O75717 1129 aaPredicted RBP12.96□□□□□ -0.33
PCYT1A-216ENST00000491544 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.33
PCYT1A-216ENST00000491544 NHLH1Q02575 133 aa12.96□□□□□ -0.33
PCYT1A-216ENST00000491544 TRIM28Q13263 835 aaKnown RBP12.96□□□□□ -0.33
PCYT1A-216ENST00000491544 ANKLE1Q8NAG6 615 aa12.96□□□□□ -0.33
PCYT1A-216ENST00000491544 TBC1D16Q8TBP0 767 aa12.96□□□□□ -0.33
PCYT1A-216ENST00000491544 NBPF3Q9H094 633 aa12.96□□□□□ -0.33
PCYT1A-216ENST00000491544 ELP3Q9H9T3 547 aa12.96□□□□□ -0.33
PCYT1A-216ENST00000491544 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.33
PCYT1A-216ENST00000491544 SH3TC1Q8TE82 1336 aa12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 PCCAP05165 728 aaPredicted RBP12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 NEFLP07196 543 aa12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 UBTFL1P0CB47 393 aaPredicted RBP12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 IREB2P48200 963 aaKnown RBP12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 GTF2A2P52657 109 aa12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 C17orf99Q6UX52 265 aa12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 ANKRD13AQ8IZ07 590 aa12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 ZBTB38Q8NAP3 1195 aaPredicted RBP12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 HELBQ8NG08 1087 aaPredicted RBP12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 EXOC6Q8TAG9 804 aa12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 USP44Q9H0E7 712 aa12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 DEFB129Q9H1M3 183 aa12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 C11orf49Q9H6J7 331 aa12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 C1orf115Q9H7X2 142 aa12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 REV3LO60673 3130 aa12.95□□□□□ -0.34
PCYT1A-216ENST00000491544 FAM86C2PA6NEL3 165 aa12.94□□□□□ -0.34
PCYT1A-216ENST00000491544 H7C1W4 665 aa12.94□□□□□ -0.34
PCYT1A-216ENST00000491544 GPR37L1O60883 481 aa12.94□□□□□ -0.34
PCYT1A-216ENST00000491544 HCLS1P14317 486 aaPredicted RBP12.94□□□□□ -0.34
PCYT1A-216ENST00000491544 SMAD3P84022 425 aaKnown RBP12.94□□□□□ -0.34
PCYT1A-216ENST00000491544 SUCLG2Q96I99 432 aa12.94□□□□□ -0.34
PCYT1A-216ENST00000491544 ZC3H12CQ9C0D7 883 aaKnown RBP12.94□□□□□ -0.34
PCYT1A-216ENST00000491544 PSME4Q14997 1843 aa12.93□□□□□ -0.34
PCYT1A-216ENST00000491544 G3V3G9 751 aa12.93□□□□□ -0.34
PCYT1A-216ENST00000491544 IRS4O14654 1257 aaPredicted RBP12.93□□□□□ -0.34
PCYT1A-216ENST00000491544 ELNP15502 786 aa12.93□□□□□ -0.34
PCYT1A-216ENST00000491544 CASP7P55210 303 aa12.93□□□□□ -0.34
PCYT1A-216ENST00000491544 DCAF8Q5TAQ9 597 aa12.93□□□□□ -0.34
PCYT1A-216ENST00000491544 PPM1EQ8WY54 764 aa12.93□□□□□ -0.34
PCYT1A-216ENST00000491544 CPA4Q9UI42 421 aa12.93□□□□□ -0.34
PCYT1A-216ENST00000491544 LRRFIP2Q9Y608 721 aaKnown RBP12.93□□□□□ -0.34
PCYT1A-216ENST00000491544 ZDBF2Q9HCK1 2354 aa12.93□□□□□ -0.34
PCYT1A-216ENST00000491544 BAHCC1Q9P281 2608 aa12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 UTYO14607 1347 aa12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 PFASO15067 1338 aa12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 USP17L3A6NCW0 530 aa12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 USP17L4A6NCW7 530 aa12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 ADCY3O60266 1144 aa12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 USP2O75604 605 aaPredicted RBP12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 GNAI3P08754 354 aa12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 GRIN2CQ14957 1233 aa12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 DDX60LQ5H9U9 1706 aaKnown RBP12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 USP17L1Q7RTZ2 530 aa12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 CCDC85AQ96PX6 553 aaPredicted RBP12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 ZCCHC17Q9NP64 241 aaKnown RBP12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 GABRQQ9UN88 632 aa12.92□□□□□ -0.34
PCYT1A-216ENST00000491544 OTOFQ9HC10 1997 aa12.91□□□□□ -0.34
PCYT1A-216ENST00000491544 EPHA10Q5JZY3 1008 aa12.91□□□□□ -0.34
PCYT1A-216ENST00000491544 PODNQ7Z5L7 613 aa12.91□□□□□ -0.34
PCYT1A-216ENST00000491544 OGFOD1Q8N543 542 aa12.91□□□□□ -0.34
PCYT1A-216ENST00000491544 MXD3Q9BW11 206 aa12.91□□□□□ -0.34
PCYT1A-216ENST00000491544 CHMP3Q9Y3E7 222 aa12.91□□□□□ -0.34
PCYT1A-216ENST00000491544 COL4A1P02462 1669 aa12.9□□□□□ -0.34
PCYT1A-216ENST00000491544 BTBD19C9JJ37 291 aa12.9□□□□□ -0.34
PCYT1A-216ENST00000491544 PDE8AO60658 829 aa12.9□□□□□ -0.34
PCYT1A-216ENST00000491544 GNAI2P04899 355 aa12.9□□□□□ -0.34
PCYT1A-216ENST00000491544 SHHQ15465 462 aa12.9□□□□□ -0.34
PCYT1A-216ENST00000491544 POTEEQ6S8J3 1075 aa12.9□□□□□ -0.34
PCYT1A-216ENST00000491544 CELF1Q92879 486 aaKnown RBP12.9□□□□□ -0.34
PCYT1A-216ENST00000491544 KAZALD1Q96I82 304 aa12.9□□□□□ -0.34
PCYT1A-216ENST00000491544 LBHD1Q9BQE6 289 aaPredicted RBP12.9□□□□□ -0.34
PCYT1A-216ENST00000491544 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.9□□□□□ -0.34
PCYT1A-216ENST00000491544 BICC1Q9H694 974 aaKnown RBP12.9□□□□□ -0.34
PCYT1A-216ENST00000491544 CHD9Q3L8U1 2897 aa12.9□□□□□ -0.34
PCYT1A-216ENST00000491544 BMP1P13497 986 aa12.89□□□□□ -0.35
PCYT1A-216ENST00000491544 CTSWP56202 376 aa12.89□□□□□ -0.35
PCYT1A-216ENST00000491544 FOXO4P98177 505 aa12.89□□□□□ -0.35
PCYT1A-216ENST00000491544 SUPT20HL1Q3ZLR7 823 aa12.89□□□□□ -0.35
PCYT1A-216ENST00000491544 C9orf50Q5SZB4 431 aa12.89□□□□□ -0.35
PCYT1A-216ENST00000491544 ANKRD44Q8N8A2 993 aa12.89□□□□□ -0.35
PCYT1A-216ENST00000491544 PXYLP1Q8TE99 480 aa12.89□□□□□ -0.35
PCYT1A-216ENST00000491544 ZBED3Q96IU2 234 aaPredicted RBP12.89□□□□□ -0.35
PCYT1A-216ENST00000491544 CHMP4BQ9H444 224 aaKnown RBP12.89□□□□□ -0.35
PCYT1A-216ENST00000491544 ZBTB40Q9NUA8 1239 aa12.89□□□□□ -0.35
PCYT1A-216ENST00000491544 PPP2R3BQ9Y5P8 575 aa12.89□□□□□ -0.35
PCYT1A-216ENST00000491544 SMIM22K7EJ46 135 aa12.88□□□□□ -0.35
PCYT1A-216ENST00000491544 UFL1O94874 794 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms