RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 G3BP1Q13283 466 aaKnown RBP eCLIP16.74■□□□□ 0.27
CDK9-204ENST00000491521 DIXDC1Q155Q3 683 aa16.74■□□□□ 0.27
CDK9-204ENST00000491521 GCC1Q96CN9 775 aa16.74■□□□□ 0.27
CDK9-204ENST00000491521 WNK4Q96J92 1243 aa16.74■□□□□ 0.27
CDK9-204ENST00000491521 TEPSINQ96N21 525 aa16.74■□□□□ 0.27
CDK9-204ENST00000491521 NEUROD6Q96NK8 337 aa16.74■□□□□ 0.27
CDK9-204ENST00000491521 BCL11AQ9H165 835 aa16.74■□□□□ 0.27
CDK9-204ENST00000491521 ELP3Q9H9T3 547 aa16.74■□□□□ 0.27
CDK9-204ENST00000491521 ZBTB47Q9UFB7 747 aaPredicted RBP16.74■□□□□ 0.27
CDK9-204ENST00000491521 SUGT1Q9Y2Z0 365 aa16.74■□□□□ 0.27
CDK9-204ENST00000491521 AK9Q5TCS8 1911 aa16.73■□□□□ 0.27
CDK9-204ENST00000491521 A0A1B0GUL7 405 aa16.73■□□□□ 0.27
CDK9-204ENST00000491521 TM4SF4P48230 202 aa16.73■□□□□ 0.27
CDK9-204ENST00000491521 MAP3K11Q16584 847 aa16.73■□□□□ 0.27
CDK9-204ENST00000491521 CCDC102BQ68D86 513 aa16.73■□□□□ 0.27
CDK9-204ENST00000491521 APOBEC3HQ6NTF7 200 aaKnown RBP16.73■□□□□ 0.27
CDK9-204ENST00000491521 DCTPP1Q9H773 170 aa16.73■□□□□ 0.27
CDK9-204ENST00000491521 DENND2AQ9ULE3 1009 aa16.73■□□□□ 0.27
CDK9-204ENST00000491521 EXOC6BQ9Y2D4 811 aa16.73■□□□□ 0.27
CDK9-204ENST00000491521 HSP90AB4PQ58FF6 505 aa16.72■□□□□ 0.27
CDK9-204ENST00000491521 GORABQ5T7V8 394 aa16.72■□□□□ 0.27
CDK9-204ENST00000491521 HHIPL2Q6UWX4 724 aa16.72■□□□□ 0.27
CDK9-204ENST00000491521 ANKRD13AQ8IZ07 590 aa16.72■□□□□ 0.27
CDK9-204ENST00000491521 XAGE2Q96GT9 111 aa16.72■□□□□ 0.27
CDK9-204ENST00000491521 AKAP2Q9Y2D5 859 aa16.72■□□□□ 0.27
CDK9-204ENST00000491521 DAGLAQ9Y4D2 1042 aa16.72■□□□□ 0.27
CDK9-204ENST00000491521 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.72■□□□□ 0.27
CDK9-204ENST00000491521 MANSC4A6NHS7 340 aaPredicted RBP16.71■□□□□ 0.27
CDK9-204ENST00000491521 GJA5P36382 358 aa16.71■□□□□ 0.27
CDK9-204ENST00000491521 TCP10Q12799 353 aa16.71■□□□□ 0.27
CDK9-204ENST00000491521 RASGRF1Q13972 1273 aa16.71■□□□□ 0.27
CDK9-204ENST00000491521 ANKRD45Q5TZF3 282 aa16.71■□□□□ 0.27
CDK9-204ENST00000491521 CNKSR2Q8WXI2 1034 aa16.71■□□□□ 0.27
CDK9-204ENST00000491521 OPTNQ96CV9 577 aa16.71■□□□□ 0.27
CDK9-204ENST00000491521 ABCF2Q9UG63 623 aa16.71■□□□□ 0.27
CDK9-204ENST00000491521 SEMA3EO15041 775 aa16.7■□□□□ 0.26
CDK9-204ENST00000491521 RAB11FIP3O75154 756 aa16.7■□□□□ 0.26
CDK9-204ENST00000491521 ZBTB48P10074 688 aaPredicted RBP16.7■□□□□ 0.26
CDK9-204ENST00000491521 DZIP1Q86YF9 867 aaKnown RBP16.7■□□□□ 0.26
CDK9-204ENST00000491521 ZNF296Q8WUU4 475 aaPredicted RBP16.7■□□□□ 0.26
CDK9-204ENST00000491521 MRIQ9BWK5 157 aa16.7■□□□□ 0.26
CDK9-204ENST00000491521 R3HDMLQ9H3Y0 253 aa16.7■□□□□ 0.26
CDK9-204ENST00000491521 NOP58Q9Y2X3 529 aaKnown RBP16.7■□□□□ 0.26
CDK9-204ENST00000491521 MYH2Q9UKX2 1941 aa16.7■□□□□ 0.26
CDK9-204ENST00000491521 MAP3K9P80192 1104 aa16.69■□□□□ 0.26
CDK9-204ENST00000491521 VGLL4Q14135 290 aa16.69■□□□□ 0.26
CDK9-204ENST00000491521 CDC42EP5Q6NZY7 148 aa16.69■□□□□ 0.26
CDK9-204ENST00000491521 IFNL1Q8IU54 200 aa16.69■□□□□ 0.26
CDK9-204ENST00000491521 ERC1Q8IUD2 1116 aa16.69■□□□□ 0.26
CDK9-204ENST00000491521 SMC5Q8IY18 1101 aa16.69■□□□□ 0.26
CDK9-204ENST00000491521 USP40Q9NVE5 1235 aa16.69■□□□□ 0.26
CDK9-204ENST00000491521 CSADQ9Y600 493 aa16.69■□□□□ 0.26
CDK9-204ENST00000491521 GPR25O00155 361 aa16.68■□□□□ 0.26
CDK9-204ENST00000491521 IGF2BP3O00425 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
CDK9-204ENST00000491521 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.68■□□□□ 0.26
CDK9-204ENST00000491521 MIGA2Q7L4E1 593 aa16.68■□□□□ 0.26
CDK9-204ENST00000491521 CTU1Q7Z7A3 348 aaKnown RBP16.68■□□□□ 0.26
CDK9-204ENST00000491521 FAM83AQ86UY5 434 aa16.68■□□□□ 0.26
CDK9-204ENST00000491521 OTUD5Q96G74 571 aa16.68■□□□□ 0.26
CDK9-204ENST00000491521 WRNIP1Q96S55 665 aa16.68■□□□□ 0.26
CDK9-204ENST00000491521 SALL1Q9NSC2 1324 aa16.68■□□□□ 0.26
CDK9-204ENST00000491521 UNCXA6NJT0 531 aa16.67■□□□□ 0.26
CDK9-204ENST00000491521 NFIAQ12857 509 aa16.67■□□□□ 0.26
CDK9-204ENST00000491521 PI16Q6UXB8 463 aa16.67■□□□□ 0.26
CDK9-204ENST00000491521 ZGPATQ8N5A5 531 aaKnown RBP16.67■□□□□ 0.26
CDK9-204ENST00000491521 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.67■□□□□ 0.26
CDK9-204ENST00000491521 ZKSCAN4Q969J2 545 aaPredicted RBP16.67■□□□□ 0.26
CDK9-204ENST00000491521 LRRCC1Q9C099 1032 aa16.67■□□□□ 0.26
CDK9-204ENST00000491521 SMARCA5O60264 1052 aaPredicted RBP16.66■□□□□ 0.26
CDK9-204ENST00000491521 ALDH1A1P00352 501 aa16.66■□□□□ 0.26
CDK9-204ENST00000491521 INHBEP58166 350 aa16.66■□□□□ 0.26
CDK9-204ENST00000491521 FKBP1CQ5VVH2 108 aa16.66■□□□□ 0.26
CDK9-204ENST00000491521 RHPN1Q8TCX5 695 aa16.66■□□□□ 0.26
CDK9-204ENST00000491521 HOOK2Q96ED9 719 aa16.66■□□□□ 0.26
CDK9-204ENST00000491521 KIF1BPQ96EK5 621 aa16.66■□□□□ 0.26
CDK9-204ENST00000491521 FKTNO75072 461 aa16.65■□□□□ 0.26
CDK9-204ENST00000491521 NUCB1Q02818 461 aa16.65■□□□□ 0.26
CDK9-204ENST00000491521 DCAF15Q66K64 600 aa16.65■□□□□ 0.26
CDK9-204ENST00000491521 SPTY2D1Q68D10 685 aaPredicted RBP16.65■□□□□ 0.26
CDK9-204ENST00000491521 TBC1D9Q6ZT07 1266 aa16.65■□□□□ 0.26
CDK9-204ENST00000491521 ERICH6Q7L0X2 663 aa16.65■□□□□ 0.26
CDK9-204ENST00000491521 FAM151AQ8WW52 585 aa16.65■□□□□ 0.26
CDK9-204ENST00000491521 LNPKQ9C0E8 428 aa16.65■□□□□ 0.26
CDK9-204ENST00000491521 IL1RAPL2Q9NP60 686 aa16.65■□□□□ 0.26
CDK9-204ENST00000491521 HMG20BQ9P0W2 317 aa16.65■□□□□ 0.26
CDK9-204ENST00000491521 OTUD7BQ6GQQ9 843 aa16.64■□□□□ 0.25
CDK9-204ENST00000491521 CHD1LQ86WJ1 897 aa16.64■□□□□ 0.25
CDK9-204ENST00000491521 ZFPM1Q8IX07 1006 aa16.64■□□□□ 0.25
CDK9-204ENST00000491521 SPATA5Q8NB90 893 aa16.64■□□□□ 0.25
CDK9-204ENST00000491521 PTPN18Q99952 460 aa16.64■□□□□ 0.25
CDK9-204ENST00000491521 ZNF341Q9BYN7 854 aa16.64■□□□□ 0.25
CDK9-204ENST00000491521 FAM198AQ9UFP1 575 aa16.64■□□□□ 0.25
CDK9-204ENST00000491521 SNCAIPQ9Y6H5 919 aa16.64■□□□□ 0.25
CDK9-204ENST00000491521 CCL15-CCL14A0A0B4J2E2 113 aa16.63■□□□□ 0.25
CDK9-204ENST00000491521 BTDP43251 543 aa16.63■□□□□ 0.25
CDK9-204ENST00000491521 RGS3P49796 1198 aa16.63■□□□□ 0.25
CDK9-204ENST00000491521 MECOMQ03112 1051 aa16.63■□□□□ 0.25
CDK9-204ENST00000491521 CRHR2Q13324 411 aa16.63■□□□□ 0.25
CDK9-204ENST00000491521 PICALMQ13492 652 aa16.63■□□□□ 0.25
CDK9-204ENST00000491521 CCL15Q16663 113 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms