RNA–Protein interactions for RNA: ENST00000491360.1

ABCB1-208, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 2

Gene ABCB1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-208ENST00000491360 COL26A1Q96A83 441 aa6.28□□□□□ -1.4
ABCB1-208ENST00000491360 POP1Q99575 1024 aaKnown RBP6.28□□□□□ -1.4
ABCB1-208ENST00000491360 POLR3GLQ9BT43 218 aa6.28□□□□□ -1.4
ABCB1-208ENST00000491360 TRPM1Q7Z4N2 1603 aa6.28□□□□□ -1.4
ABCB1-208ENST00000491360 CAMSAP2Q08AD1 1489 aa6.28□□□□□ -1.4
ABCB1-208ENST00000491360 MYO5CQ9NQX4 1742 aa6.28□□□□□ -1.4
ABCB1-208ENST00000491360 KDM5DQ9BY66 1539 aa6.27□□□□□ -1.41
ABCB1-208ENST00000491360 FAM95CA0A1B0GW59 222 aa6.27□□□□□ -1.41
ABCB1-208ENST00000491360 DBX1A6NMT0 343 aa6.27□□□□□ -1.41
ABCB1-208ENST00000491360 NLRP12P59046 1061 aa6.27□□□□□ -1.41
ABCB1-208ENST00000491360 SGO2Q562F6 1265 aa6.27□□□□□ -1.41
ABCB1-208ENST00000491360 NUTM2GQ5VZR2 741 aa6.27□□□□□ -1.41
ABCB1-208ENST00000491360 NFXL1Q6ZNB6 911 aa6.27□□□□□ -1.41
ABCB1-208ENST00000491360 CEP120Q8N960 986 aa6.27□□□□□ -1.41
ABCB1-208ENST00000491360 C12orf50Q8NA57 414 aaPredicted RBP6.27□□□□□ -1.41
ABCB1-208ENST00000491360 GLMNQ92990 594 aa6.27□□□□□ -1.41
ABCB1-208ENST00000491360 ARXQ96QS3 562 aa6.27□□□□□ -1.41
ABCB1-208ENST00000491360 ABI2Q9NYB9 513 aaPredicted RBP6.27□□□□□ -1.41
ABCB1-208ENST00000491360 KIAA0556O60303 1618 aa6.27□□□□□ -1.41
ABCB1-208ENST00000491360 CDC42BPAQ5VT25 1732 aa6.27□□□□□ -1.41
ABCB1-208ENST00000491360 BIN1O00499 593 aa6.26□□□□□ -1.41
ABCB1-208ENST00000491360 NFKBIBQ15653 356 aa6.26□□□□□ -1.41
ABCB1-208ENST00000491360 ADAMTSL4Q6UY14 1074 aa6.26□□□□□ -1.41
ABCB1-208ENST00000491360 FLCNQ8NFG4 579 aa6.26□□□□□ -1.41
ABCB1-208ENST00000491360 FAM200AQ8TCP9 573 aa6.26□□□□□ -1.41
ABCB1-208ENST00000491360 UBE2Q2Q8WVN8 375 aa6.26□□□□□ -1.41
ABCB1-208ENST00000491360 PPP1R12CQ9BZL4 782 aa6.26□□□□□ -1.41
ABCB1-208ENST00000491360 ZMYND15Q9H091 742 aa6.26□□□□□ -1.41
ABCB1-208ENST00000491360 CYP4F12Q9HCS2 524 aa6.26□□□□□ -1.41
ABCB1-208ENST00000491360 TDRD9Q8NDG6 1382 aaKnown RBP6.26□□□□□ -1.41
ABCB1-208ENST00000491360 USP11P51784 963 aa6.25□□□□□ -1.41
ABCB1-208ENST00000491360 CNGB1Q14028 1251 aaPredicted RBP6.25□□□□□ -1.41
ABCB1-208ENST00000491360 COL19A1Q14993 1142 aa6.25□□□□□ -1.41
ABCB1-208ENST00000491360 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
ABCB1-208ENST00000491360 C16orf46Q6P387 395 aa6.25□□□□□ -1.41
ABCB1-208ENST00000491360 SMG8Q8ND04 991 aaKnown RBP6.25□□□□□ -1.41
ABCB1-208ENST00000491360 SUGCTQ9HAC7 445 aa6.25□□□□□ -1.41
ABCB1-208ENST00000491360 PARD3Q8TEW0 1356 aa6.25□□□□□ -1.41
ABCB1-208ENST00000491360 BLMP54132 1417 aaPredicted RBP6.25□□□□□ -1.41
ABCB1-208ENST00000491360 C19orf57Q0VDD7 668 aa6.24□□□□□ -1.41
ABCB1-208ENST00000491360 PKN1Q16512 942 aa6.24□□□□□ -1.41
ABCB1-208ENST00000491360 ZNF648Q5T619 568 aaPredicted RBP6.24□□□□□ -1.41
ABCB1-208ENST00000491360 SLC7A3Q8WY07 619 aa6.24□□□□□ -1.41
ABCB1-208ENST00000491360 PAK6Q9NQU5 681 aaPredicted RBP6.24□□□□□ -1.41
ABCB1-208ENST00000491360 KIAA0586Q9BVV6 1533 aa6.24□□□□□ -1.41
ABCB1-208ENST00000491360 SHANK2Q9UPX8 1470 aa6.23□□□□□ -1.41
ABCB1-208ENST00000491360 ANKRD30AQ9BXX3 1397 aa6.23□□□□□ -1.41
ABCB1-208ENST00000491360 LMOD1P29536 600 aaPredicted RBP6.23□□□□□ -1.41
ABCB1-208ENST00000491360 FKBP5Q13451 457 aaPredicted RBP6.23□□□□□ -1.41
ABCB1-208ENST00000491360 ZNF326Q5BKZ1 582 aaKnown RBP6.23□□□□□ -1.41
ABCB1-208ENST00000491360 DUSP27Q5VZP5 1158 aa6.23□□□□□ -1.41
ABCB1-208ENST00000491360 CRBNQ96SW2 442 aa6.23□□□□□ -1.41
ABCB1-208ENST00000491360 YIPF2Q9BWQ6 316 aa6.23□□□□□ -1.41
ABCB1-208ENST00000491360 CARD11Q9BXL7 1154 aa6.23□□□□□ -1.41
ABCB1-208ENST00000491360 TMPRSS13Q9BYE2 586 aa6.23□□□□□ -1.41
ABCB1-208ENST00000491360 KRTAP4-11Q9BYQ6 195 aa6.23□□□□□ -1.41
ABCB1-208ENST00000491360 BRPF3Q9ULD4 1205 aa6.23□□□□□ -1.41
ABCB1-208ENST00000491360 EIF2AK4Q9P2K8 1649 aaKnown RBP6.23□□□□□ -1.41
ABCB1-208ENST00000491360 CLASP1Q7Z460 1538 aa6.23□□□□□ -1.41
ABCB1-208ENST00000491360 EIF4G3O43432 1585 aaKnown RBP6.23□□□□□ -1.41
ABCB1-208ENST00000491360 NUP153P49790 1475 aaKnown RBP6.22□□□□□ -1.41
ABCB1-208ENST00000491360 ZNF608Q9ULD9 1512 aaPredicted RBP6.22□□□□□ -1.41
ABCB1-208ENST00000491360 FARP2O94887 1054 aaPredicted RBP6.22□□□□□ -1.41
ABCB1-208ENST00000491360 TIAF1O95411 115 aa6.22□□□□□ -1.41
ABCB1-208ENST00000491360 CENPQQ7L2Z9 268 aaPredicted RBP6.22□□□□□ -1.41
ABCB1-208ENST00000491360 ZAR1Q86SH2 424 aa6.22□□□□□ -1.41
ABCB1-208ENST00000491360 FAM43AQ8N2R8 423 aa6.22□□□□□ -1.41
ABCB1-208ENST00000491360 FRAT1Q92837 279 aaPredicted RBP6.22□□□□□ -1.41
ABCB1-208ENST00000491360 TBC1D32Q96NH3 1257 aa6.22□□□□□ -1.41
ABCB1-208ENST00000491360 TROQ12816 1431 aaPredicted RBP6.22□□□□□ -1.41
ABCB1-208ENST00000491360 PRDM15P57071 1507 aaPredicted RBP6.21□□□□□ -1.42
ABCB1-208ENST00000491360 PAPLNO95428 1278 aa6.21□□□□□ -1.42
ABCB1-208ENST00000491360 CYP2E1P05181 493 aaPredicted RBP6.21□□□□□ -1.42
ABCB1-208ENST00000491360 ZAP70P43403 619 aa6.21□□□□□ -1.42
ABCB1-208ENST00000491360 CYP27A1Q02318 531 aa6.21□□□□□ -1.42
ABCB1-208ENST00000491360 ZNF124Q15973 351 aa6.21□□□□□ -1.42
ABCB1-208ENST00000491360 PDE12Q6L8Q7 609 aaKnown RBP6.21□□□□□ -1.42
ABCB1-208ENST00000491360 SAP130Q9H0E3 1048 aa6.21□□□□□ -1.42
ABCB1-208ENST00000491360 PDS5BQ9NTI5 1447 aa6.21□□□□□ -1.42
ABCB1-208ENST00000491360 KDM2BQ8NHM5 1336 aa6.21□□□□□ -1.42
ABCB1-208ENST00000491360 GPATCH8Q9UKJ3 1502 aaKnown RBP6.2□□□□□ -1.42
ABCB1-208ENST00000491360 ANKRD50Q9ULJ7 1429 aa6.2□□□□□ -1.42
ABCB1-208ENST00000491360 ST20-MTHFSA0A0A6YYL1 179 aa6.2□□□□□ -1.42
ABCB1-208ENST00000491360 PDE2AO00408 941 aaPredicted RBP6.2□□□□□ -1.42
ABCB1-208ENST00000491360 EXOSC6Q5RKV6 272 aaKnown RBP6.2□□□□□ -1.42
ABCB1-208ENST00000491360 SPOCD1Q6ZMY3 1216 aa6.2□□□□□ -1.42
ABCB1-208ENST00000491360 SHISA5Q8N114 240 aa6.2□□□□□ -1.42
ABCB1-208ENST00000491360 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.2□□□□□ -1.42
ABCB1-208ENST00000491360 GPR152Q8TDT2 470 aa6.2□□□□□ -1.42
ABCB1-208ENST00000491360 FBLIM1Q8WUP2 373 aa6.2□□□□□ -1.42
ABCB1-208ENST00000491360 CALR3Q96L12 384 aaKnown RBP6.2□□□□□ -1.42
ABCB1-208ENST00000491360 ELP3Q9H9T3 547 aa6.2□□□□□ -1.42
ABCB1-208ENST00000491360 PRKAG2Q9UGJ0 569 aa6.2□□□□□ -1.42
ABCB1-208ENST00000491360 RNF17Q9BXT8 1623 aaKnown RBP6.2□□□□□ -1.42
ABCB1-208ENST00000491360 ZNF644Q9H582 1327 aaPredicted RBP6.2□□□□□ -1.42
ABCB1-208ENST00000491360 DISP1Q96F81 1524 aa6.2□□□□□ -1.42
ABCB1-208ENST00000491360 EIF3AQ14152 1382 aaKnown RBP6.19□□□□□ -1.42
ABCB1-208ENST00000491360 ARHGEF5Q12774 1597 aa6.19□□□□□ -1.42
ABCB1-208ENST00000491360 PTPRGP23470 1445 aa6.19□□□□□ -1.42
ABCB1-208ENST00000491360 EIF4EBP3O60516 100 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms