RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 GJA5P36382 358 aa16.77■□□□□ 0.28
TRAIP-211ENST00000491060 HDLBPQ00341 1268 aaKnown RBP16.77■□□□□ 0.28
TRAIP-211ENST00000491060 PICALMQ13492 652 aa16.77■□□□□ 0.28
TRAIP-211ENST00000491060 POLA2Q14181 598 aa16.77■□□□□ 0.28
TRAIP-211ENST00000491060 HHIPL2Q6UWX4 724 aa16.77■□□□□ 0.28
TRAIP-211ENST00000491060 R3HDMLQ9H3Y0 253 aa16.77■□□□□ 0.28
TRAIP-211ENST00000491060 HMG20BQ9P0W2 317 aa16.77■□□□□ 0.28
TRAIP-211ENST00000491060 EXOC6BQ9Y2D4 811 aa16.77■□□□□ 0.28
TRAIP-211ENST00000491060 ECM2O94769 699 aaPredicted RBP16.76■□□□□ 0.27
TRAIP-211ENST00000491060 SLURP2P0DP57 97 aa16.76■□□□□ 0.27
TRAIP-211ENST00000491060 TNNI3KQ59H18 835 aa16.76■□□□□ 0.27
TRAIP-211ENST00000491060 ERICH6Q7L0X2 663 aa16.76■□□□□ 0.27
TRAIP-211ENST00000491060 ZFPM1Q8IX07 1006 aa16.76■□□□□ 0.27
TRAIP-211ENST00000491060 ANKRD13AQ8IZ07 590 aa16.76■□□□□ 0.27
TRAIP-211ENST00000491060 SPATA5Q8NB90 893 aa16.76■□□□□ 0.27
TRAIP-211ENST00000491060 SSH3Q8TE77 659 aa16.76■□□□□ 0.27
TRAIP-211ENST00000491060 ZKSCAN4Q969J2 545 aaPredicted RBP16.76■□□□□ 0.27
TRAIP-211ENST00000491060 OPTNQ96CV9 577 aa16.76■□□□□ 0.27
TRAIP-211ENST00000491060 OTUD5Q96G74 571 aa16.76■□□□□ 0.27
TRAIP-211ENST00000491060 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
TRAIP-211ENST00000491060 FPGT-TNNI3KV9GXZ4 949 aa16.76■□□□□ 0.27
TRAIP-211ENST00000491060 DOCK2Q92608 1830 aa16.75■□□□□ 0.27
TRAIP-211ENST00000491060 SEMA3EO15041 775 aa16.75■□□□□ 0.27
TRAIP-211ENST00000491060 BTDP43251 543 aa16.75■□□□□ 0.27
TRAIP-211ENST00000491060 SREBF2Q12772 1141 aa16.75■□□□□ 0.27
TRAIP-211ENST00000491060 VGLL4Q14135 290 aa16.75■□□□□ 0.27
TRAIP-211ENST00000491060 C20orf194Q5TEA3 1177 aa16.75■□□□□ 0.27
TRAIP-211ENST00000491060 CEP85Q6P2H3 762 aa16.75■□□□□ 0.27
TRAIP-211ENST00000491060 ZSCAN29Q8IWY8 852 aaPredicted RBP16.75■□□□□ 0.27
TRAIP-211ENST00000491060 WRNIP1Q96S55 665 aa16.75■□□□□ 0.27
TRAIP-211ENST00000491060 SUGT1Q9Y2Z0 365 aa16.75■□□□□ 0.27
TRAIP-211ENST00000491060 NDUFB9Q9Y6M9 179 aa16.75■□□□□ 0.27
TRAIP-211ENST00000491060 MCAMP43121 646 aa16.74■□□□□ 0.27
TRAIP-211ENST00000491060 MAP3K9P80192 1104 aa16.74■□□□□ 0.27
TRAIP-211ENST00000491060 MECOMQ03112 1051 aa16.74■□□□□ 0.27
TRAIP-211ENST00000491060 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.74■□□□□ 0.27
TRAIP-211ENST00000491060 IL1RAPL2Q9NP60 686 aa16.74■□□□□ 0.27
TRAIP-211ENST00000491060 SAGE1Q9NXZ1 904 aa16.74■□□□□ 0.27
TRAIP-211ENST00000491060 CSADQ9Y600 493 aa16.74■□□□□ 0.27
TRAIP-211ENST00000491060 IGF2BP3O00425 579 aaKnown RBP eCLIP16.73■□□□□ 0.27
TRAIP-211ENST00000491060 RGS3P49796 1198 aa16.73■□□□□ 0.27
TRAIP-211ENST00000491060 MAP3K11Q16584 847 aa16.73■□□□□ 0.27
TRAIP-211ENST00000491060 ZGPATQ8N5A5 531 aaKnown RBP16.73■□□□□ 0.27
TRAIP-211ENST00000491060 LRP2BPQ9P2M1 347 aa16.73■□□□□ 0.27
TRAIP-211ENST00000491060 FAM198AQ9UFP1 575 aa16.73■□□□□ 0.27
TRAIP-211ENST00000491060 SALL1Q9NSC2 1324 aa16.72■□□□□ 0.27
TRAIP-211ENST00000491060 MANSC4A6NHS7 340 aaPredicted RBP16.72■□□□□ 0.27
TRAIP-211ENST00000491060 INPP5BP32019 993 aa16.72■□□□□ 0.27
TRAIP-211ENST00000491060 TM4SF4P48230 202 aa16.72■□□□□ 0.27
TRAIP-211ENST00000491060 CCDC158Q5M9N0 1113 aa16.72■□□□□ 0.27
TRAIP-211ENST00000491060 SPTY2D1Q68D10 685 aaPredicted RBP16.72■□□□□ 0.27
TRAIP-211ENST00000491060 ZNF296Q8WUU4 475 aaPredicted RBP16.72■□□□□ 0.27
TRAIP-211ENST00000491060 ARID4AP29374 1257 aaPredicted RBP16.71■□□□□ 0.27
TRAIP-211ENST00000491060 AACSQ86V21 672 aa16.71■□□□□ 0.27
TRAIP-211ENST00000491060 IFNL1Q8IU54 200 aa16.71■□□□□ 0.27
TRAIP-211ENST00000491060 REM2Q8IYK8 340 aaPredicted RBP16.71■□□□□ 0.27
TRAIP-211ENST00000491060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.71■□□□□ 0.27
TRAIP-211ENST00000491060 ZNF384Q8TF68 577 aa16.71■□□□□ 0.27
TRAIP-211ENST00000491060 FAM151AQ8WW52 585 aa16.71■□□□□ 0.27
TRAIP-211ENST00000491060 MRIQ9BWK5 157 aa16.71■□□□□ 0.27
TRAIP-211ENST00000491060 MROH7-TTC4A0A0A0MT08 1334 aa16.7■□□□□ 0.26
TRAIP-211ENST00000491060 FAM196BA6NMK8 535 aa16.7■□□□□ 0.26
TRAIP-211ENST00000491060 UQCRFS1P1P0C7P4 283 aa16.7■□□□□ 0.26
TRAIP-211ENST00000491060 ZBTB48P10074 688 aaPredicted RBP16.7■□□□□ 0.26
TRAIP-211ENST00000491060 ZAP70P43403 619 aa16.7■□□□□ 0.26
TRAIP-211ENST00000491060 FAM83AQ86UY5 434 aa16.7■□□□□ 0.26
TRAIP-211ENST00000491060 EAF2Q96CJ1 260 aaPredicted RBP16.7■□□□□ 0.26
TRAIP-211ENST00000491060 ZNF341Q9BYN7 854 aa16.7■□□□□ 0.26
TRAIP-211ENST00000491060 DDX4Q9NQI0 724 aaKnown RBP16.7■□□□□ 0.26
TRAIP-211ENST00000491060 DBNLQ9UJU6 430 aaKnown RBP16.7■□□□□ 0.26
TRAIP-211ENST00000491060 SNCAIPQ9Y6H5 919 aa16.7■□□□□ 0.26
TRAIP-211ENST00000491060 MAST2Q6P0Q8 1798 aa16.69■□□□□ 0.26
TRAIP-211ENST00000491060 CCL15-CCL14A0A0B4J2E2 113 aa16.69■□□□□ 0.26
TRAIP-211ENST00000491060 GPR25O00155 361 aa16.69■□□□□ 0.26
TRAIP-211ENST00000491060 MS4A1P11836 297 aa16.69■□□□□ 0.26
TRAIP-211ENST00000491060 CCL15Q16663 113 aa16.69■□□□□ 0.26
TRAIP-211ENST00000491060 SLC4A8Q2Y0W8 1093 aa16.69■□□□□ 0.26
TRAIP-211ENST00000491060 DCAF15Q66K64 600 aa16.69■□□□□ 0.26
TRAIP-211ENST00000491060 CDK5RAP2Q96SN8 1893 aa16.69■□□□□ 0.26
TRAIP-211ENST00000491060 DDTLA6NHG4 134 aaPredicted RBP16.68■□□□□ 0.26
TRAIP-211ENST00000491060 SH3BP5LQ7L8J4 393 aa16.68■□□□□ 0.26
TRAIP-211ENST00000491060 SLF2Q8IX21 1173 aa16.68■□□□□ 0.26
TRAIP-211ENST00000491060 SH3RF3Q8TEJ3 882 aaPredicted RBP16.68■□□□□ 0.26
TRAIP-211ENST00000491060 NSUN4Q96CB9 384 aaKnown RBP16.68■□□□□ 0.26
TRAIP-211ENST00000491060 PTPN18Q99952 460 aa16.68■□□□□ 0.26
TRAIP-211ENST00000491060 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
TRAIP-211ENST00000491060 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.68■□□□□ 0.26
TRAIP-211ENST00000491060 DDX19BQ9UMR2 479 aa16.68■□□□□ 0.26
TRAIP-211ENST00000491060 GAKO14976 1311 aa16.68■□□□□ 0.26
TRAIP-211ENST00000491060 CYP2E1P05181 493 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-211ENST00000491060 CRHR2Q13324 411 aa16.67■□□□□ 0.26
TRAIP-211ENST00000491060 FKBP1CQ5VVH2 108 aa16.67■□□□□ 0.26
TRAIP-211ENST00000491060 NAA16Q6N069 864 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-211ENST00000491060 CTU1Q7Z7A3 348 aaKnown RBP16.67■□□□□ 0.26
TRAIP-211ENST00000491060 CCDC84Q86UT8 332 aaPredicted RBP16.67■□□□□ 0.26
TRAIP-211ENST00000491060 BRI3BPQ8WY22 251 aa16.67■□□□□ 0.26
TRAIP-211ENST00000491060 NOL10Q9BSC4 688 aaKnown RBP16.67■□□□□ 0.26
TRAIP-211ENST00000491060 AATFQ9NY61 560 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRAIP-211ENST00000491060 NOP58Q9Y2X3 529 aaKnown RBP16.67■□□□□ 0.26
TRAIP-211ENST00000491060 ZSWIM8A7E2V4 1837 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms