RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, human

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA1-209	ENST00000490869	CNKSR2	Q8WXI2	1034 aa		13.5	□□□□□ -0.25
UBA1-209	ENST00000490869	HOOK2	Q96ED9	719 aa		13.5	□□□□□ -0.25
UBA1-209	ENST00000490869	XAGE2	Q96GT9	111 aa		13.5	□□□□□ -0.25
UBA1-209	ENST00000490869	PNMA6E	A0A0J9YXQ4	647 aa		13.49	□□□□□ -0.25
UBA1-209	ENST00000490869	TESPA1	A2RU30	521 aa	Predicted RBP	13.49	□□□□□ -0.25
UBA1-209	ENST00000490869	RGS19	P49795	217 aa		13.49	□□□□□ -0.25
UBA1-209	ENST00000490869	RASGRF1	Q13972	1273 aa		13.49	□□□□□ -0.25
UBA1-209	ENST00000490869	MVP	Q14764	893 aa	Known RBP	13.49	□□□□□ -0.25
UBA1-209	ENST00000490869	DCAF15	Q66K64	600 aa		13.49	□□□□□ -0.25
UBA1-209	ENST00000490869	CDC42EP5	Q6NZY7	148 aa		13.49	□□□□□ -0.25
UBA1-209	ENST00000490869	FAM151A	Q8WW52	585 aa		13.49	□□□□□ -0.25
UBA1-209	ENST00000490869	NEUROD6	Q96NK8	337 aa		13.49	□□□□□ -0.25
UBA1-209	ENST00000490869	WRNIP1	Q96S55	665 aa		13.49	□□□□□ -0.25
UBA1-209	ENST00000490869	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.49	□□□□□ -0.25
UBA1-209	ENST00000490869	PDS5A	Q29RF7	1337 aa	Known RBP	13.48	□□□□□ -0.25
UBA1-209	ENST00000490869	MLLT1	Q03111	559 aa	Predicted RBP	13.48	□□□□□ -0.25
UBA1-209	ENST00000490869	TCP10	Q12799	353 aa		13.48	□□□□□ -0.25
UBA1-209	ENST00000490869	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.48	□□□□□ -0.25	1e-7	■■■□□ 19
UBA1-209	ENST00000490869	DZIP1	Q86YF9	867 aa	Known RBP	13.48	□□□□□ -0.25
UBA1-209	ENST00000490869	FTSJ3	Q8IY81	847 aa	Known RBP	13.48	□□□□□ -0.25
UBA1-209	ENST00000490869	OTUD5	Q96G74	571 aa		13.48	□□□□□ -0.25
UBA1-209	ENST00000490869	MS4A4A	Q96JQ5	239 aa		13.48	□□□□□ -0.25
UBA1-209	ENST00000490869	PTPN18	Q99952	460 aa		13.48	□□□□□ -0.25
UBA1-209	ENST00000490869	USP40	Q9NVE5	1235 aa		13.48	□□□□□ -0.25
UBA1-209	ENST00000490869	ABCF2	Q9UG63	623 aa		13.48	□□□□□ -0.25
UBA1-209	ENST00000490869	HPS5	Q9UPZ3	1129 aa		13.48	□□□□□ -0.25
UBA1-209	ENST00000490869	SNCAIP	Q9Y6H5	919 aa		13.48	□□□□□ -0.25
UBA1-209	ENST00000490869	ZBED9	Q6R2W3	1325 aa		13.47	□□□□□ -0.25
UBA1-209	ENST00000490869	SPDYE5	A6NIY4	337 aa		13.47	□□□□□ -0.25
UBA1-209	ENST00000490869	GTF2A2	P52657	109 aa		13.47	□□□□□ -0.25
UBA1-209	ENST00000490869	NFIA	Q12857	509 aa		13.47	□□□□□ -0.25
UBA1-209	ENST00000490869	CRHR2	Q13324	411 aa		13.47	□□□□□ -0.25
UBA1-209	ENST00000490869	MIGA2	Q7L4E1	593 aa		13.47	□□□□□ -0.25
UBA1-209	ENST00000490869	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.47	□□□□□ -0.25
UBA1-209	ENST00000490869	ZNF341	Q9BYN7	854 aa		13.47	□□□□□ -0.25
UBA1-209	ENST00000490869	GAK	O14976	1311 aa		13.46	□□□□□ -0.25
UBA1-209	ENST00000490869	CCL15-CCL14	A0A0B4J2E2	113 aa		13.46	□□□□□ -0.25
UBA1-209	ENST00000490869	SOX10	P56693	466 aa		13.46	□□□□□ -0.25
UBA1-209	ENST00000490869	CCL15	Q16663	113 aa		13.46	□□□□□ -0.25
UBA1-209	ENST00000490869	GORAB	Q5T7V8	394 aa		13.46	□□□□□ -0.25
UBA1-209	ENST00000490869	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.46	□□□□□ -0.25
UBA1-209	ENST00000490869	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.46	□□□□□ -0.25
UBA1-209	ENST00000490869	ERO1B	Q86YB8	467 aa		13.46	□□□□□ -0.25
UBA1-209	ENST00000490869	ITPRIP	Q8IWB1	547 aa		13.46	□□□□□ -0.25
UBA1-209	ENST00000490869	SLF2	Q8IX21	1173 aa		13.46	□□□□□ -0.25
UBA1-209	ENST00000490869	BRI3BP	Q8WY22	251 aa		13.46	□□□□□ -0.25
UBA1-209	ENST00000490869	FAM198A	Q9UFP1	575 aa		13.46	□□□□□ -0.25
UBA1-209	ENST00000490869	POLA2	Q14181	598 aa		13.45	□□□□□ -0.26
UBA1-209	ENST00000490869	ERICH6	Q7L0X2	663 aa		13.45	□□□□□ -0.26
UBA1-209	ENST00000490869	C1orf115	Q9H7X2	142 aa		13.45	□□□□□ -0.26
UBA1-209	ENST00000490869	HMG20B	Q9P0W2	317 aa		13.45	□□□□□ -0.26
UBA1-209	ENST00000490869	RLBP1	P12271	317 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	ARID4A	P29374	1257 aa	Predicted RBP	13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	INPP5B	P32019	993 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	BTD	P43251	543 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	RGS3	P49796	1198 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	ATP8B2	P98198	1209 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	MECOM	Q03112	1051 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	PPIL2	Q13356	520 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	TAF1C	Q15572	869 aa	Predicted RBP	13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	PI16	Q6UXB8	463 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	ZFPM1	Q8IX07	1006 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	SPATA5	Q8NB90	893 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	SSH3	Q8TE77	659 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	FAM163A	Q96GL9	167 aa	Predicted RBP	13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	ERO1A	Q96HE7	468 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	IDI2	Q9BXS1	227 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	ZNF112	Q9UJU3	913 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	TRIM17	Q9Y577	477 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	MYH2	Q9UKX2	1941 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	RFX7	Q2KHR2	1363 aa		13.44	□□□□□ -0.26
UBA1-209	ENST00000490869	MROH7-TTC4	A0A0A0MT08	1334 aa		13.43	□□□□□ -0.26
UBA1-209	ENST00000490869	IRF6	O14896	467 aa		13.43	□□□□□ -0.26
UBA1-209	ENST00000490869	ZBTB7B	O15156	539 aa	Predicted RBP	13.43	□□□□□ -0.26
UBA1-209	ENST00000490869	ENTPD3	O75355	529 aa		13.43	□□□□□ -0.26
UBA1-209	ENST00000490869	CETP	P11597	493 aa		13.43	□□□□□ -0.26
UBA1-209	ENST00000490869	SP3	Q02447	781 aa		13.43	□□□□□ -0.26
UBA1-209	ENST00000490869	PPAT	Q06203	517 aa		13.43	□□□□□ -0.26
UBA1-209	ENST00000490869	OS9	Q13438	667 aa	Predicted RBP	13.43	□□□□□ -0.26
UBA1-209	ENST00000490869	SNAPC2	Q13487	334 aa		13.43	□□□□□ -0.26
UBA1-209	ENST00000490869	OTOP1	Q7RTM1	612 aa		13.43	□□□□□ -0.26
UBA1-209	ENST00000490869	FAM43A	Q8N2R8	423 aa		13.43	□□□□□ -0.26
UBA1-209	ENST00000490869	CD99L2	Q8TCZ2	262 aa		13.43	□□□□□ -0.26
UBA1-209	ENST00000490869	ZFYVE28	Q9HCC9	887 aa		13.43	□□□□□ -0.26
UBA1-209	ENST00000490869	DOCK2	Q92608	1830 aa		13.42	□□□□□ -0.26
UBA1-209	ENST00000490869	SURF6	O75683	361 aa	Known RBP	13.42	□□□□□ -0.26
UBA1-209	ENST00000490869	UQCRFS1P1	P0C7P4	283 aa		13.42	□□□□□ -0.26
UBA1-209	ENST00000490869	MCAM	P43121	646 aa		13.42	□□□□□ -0.26
UBA1-209	ENST00000490869	PICALM	Q13492	652 aa		13.42	□□□□□ -0.26
UBA1-209	ENST00000490869	TNNI3K	Q59H18	835 aa		13.42	□□□□□ -0.26
UBA1-209	ENST00000490869	TBC1D9	Q6ZT07	1266 aa		13.42	□□□□□ -0.26
UBA1-209	ENST00000490869	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.42	□□□□□ -0.26
UBA1-209	ENST00000490869	GPR108	Q9NPR9	543 aa		13.42	□□□□□ -0.26
UBA1-209	ENST00000490869	FPGT-TNNI3K	V9GXZ4	949 aa		13.42	□□□□□ -0.26
UBA1-209	ENST00000490869	ATRNL1	Q5VV63	1379 aa		13.42	□□□□□ -0.26
UBA1-209	ENST00000490869	AK9	Q5TCS8	1911 aa		13.41	□□□□□ -0.26
UBA1-209	ENST00000490869	GPR75-ASB3	A0A0A6YYF3	556 aa		13.41	□□□□□ -0.26
UBA1-209	ENST00000490869	BTBD19	C9JJ37	291 aa		13.41	□□□□□ -0.26
UBA1-209	ENST00000490869	WDHD1	O75717	1129 aa	Predicted RBP	13.41	□□□□□ -0.26
UBA1-209	ENST00000490869	LDHC	P07864	332 aa		13.41	□□□□□ -0.26

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