RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 CD99L2Q8TCZ2 262 aa24.46■■□□□ 1.51
SREBF1-216ENST00000490796 FAM151AQ8WW52 585 aa24.46■■□□□ 1.51
SREBF1-216ENST00000490796 BRI3BPQ8WY22 251 aa24.46■■□□□ 1.51
SREBF1-216ENST00000490796 MS4A4AQ96JQ5 239 aa24.46■■□□□ 1.51
SREBF1-216ENST00000490796 ZNF341Q9BYN7 854 aa24.46■■□□□ 1.51
SREBF1-216ENST00000490796 DAGLAQ9Y4D2 1042 aa24.46■■□□□ 1.51
SREBF1-216ENST00000490796 SPDYE5A6NIY4 337 aa24.45■■□□□ 1.5
SREBF1-216ENST00000490796 PHKA1P46020 1223 aa24.45■■□□□ 1.5
SREBF1-216ENST00000490796 ARHGEF6Q15052 776 aa24.45■■□□□ 1.5
SREBF1-216ENST00000490796 FRAT1Q92837 279 aaPredicted RBP24.45■■□□□ 1.5
SREBF1-216ENST00000490796 EFCC1Q9HA90 598 aa24.45■■□□□ 1.5
SREBF1-216ENST00000490796 AKAP2Q9Y2D5 859 aa24.45■■□□□ 1.5
SREBF1-216ENST00000490796 RPAP1Q9BWH6 1393 aaPredicted RBP24.44■■□□□ 1.5
SREBF1-216ENST00000490796 CETPP11597 493 aa24.44■■□□□ 1.5
SREBF1-216ENST00000490796 TCP10Q12799 353 aa24.44■■□□□ 1.5
SREBF1-216ENST00000490796 CDC42EP5Q6NZY7 148 aa24.44■■□□□ 1.5
SREBF1-216ENST00000490796 MIGA2Q7L4E1 593 aa24.44■■□□□ 1.5
SREBF1-216ENST00000490796 ZKSCAN4Q969J2 545 aaPredicted RBP24.44■■□□□ 1.5
SREBF1-216ENST00000490796 USP40Q9NVE5 1235 aa24.44■■□□□ 1.5
SREBF1-216ENST00000490796 SALL1Q9NSC2 1324 aa24.43■■□□□ 1.5
SREBF1-216ENST00000490796 SNAPC2Q13487 334 aa24.43■■□□□ 1.5
SREBF1-216ENST00000490796 CCDC102BQ68D86 513 aa24.43■■□□□ 1.5
SREBF1-216ENST00000490796 SNCAIPQ9Y6H5 919 aa24.43■■□□□ 1.5
SREBF1-216ENST00000490796 ADORA1P30542 326 aa24.42■■□□□ 1.5
SREBF1-216ENST00000490796 DZIP1Q86YF9 867 aaKnown RBP24.42■■□□□ 1.5
SREBF1-216ENST00000490796 SLF2Q8IX21 1173 aa24.42■■□□□ 1.5
SREBF1-216ENST00000490796 LAMB1P07942 1786 aa24.42■■□□□ 1.5
SREBF1-216ENST00000490796 TIMM10P62072 90 aa24.41■■□□□ 1.5
SREBF1-216ENST00000490796 PPIL2Q13356 520 aa24.41■■□□□ 1.5
SREBF1-216ENST00000490796 MVPQ14764 893 aaKnown RBP24.41■■□□□ 1.5
SREBF1-216ENST00000490796 ABCF2Q9UG63 623 aa24.41■■□□□ 1.5
SREBF1-216ENST00000490796 AK9Q5TCS8 1911 aa24.4■■□□□ 1.5
SREBF1-216ENST00000490796 A0A1B0GUL7 405 aa24.4■■□□□ 1.5
SREBF1-216ENST00000490796 GNAI2P04899 355 aa24.4■■□□□ 1.5
SREBF1-216ENST00000490796 GORABQ5T7V8 394 aa24.4■■□□□ 1.5
SREBF1-216ENST00000490796 SPTY2D1Q68D10 685 aaPredicted RBP24.4■■□□□ 1.5
SREBF1-216ENST00000490796 ATF7IPQ6VMQ6 1270 aa24.4■■□□□ 1.5
SREBF1-216ENST00000490796 FAM43AQ8N2R8 423 aa24.4■■□□□ 1.5
SREBF1-216ENST00000490796 NEUROD6Q96NK8 337 aa24.4■■□□□ 1.5
SREBF1-216ENST00000490796 PTPN22Q9Y2R2 807 aa24.4■■□□□ 1.5
SREBF1-216ENST00000490796 IRF6O14896 467 aa24.39■■□□□ 1.49
SREBF1-216ENST00000490796 TRIM27P14373 513 aa24.39■■□□□ 1.49
SREBF1-216ENST00000490796 PPATQ06203 517 aa24.39■■□□□ 1.49
SREBF1-216ENST00000490796 TFCP2Q12800 502 aa24.39■■□□□ 1.49
SREBF1-216ENST00000490796 NFIAQ12857 509 aa24.39■■□□□ 1.49
SREBF1-216ENST00000490796 INPP5BP32019 993 aa24.38■■□□□ 1.49
SREBF1-216ENST00000490796 MTX1Q13505 466 aa24.38■■□□□ 1.49
SREBF1-216ENST00000490796 RASGRF1Q13972 1273 aa24.38■■□□□ 1.49
SREBF1-216ENST00000490796 CLUAP1Q96AJ1 413 aa24.38■■□□□ 1.49
SREBF1-216ENST00000490796 XAGE2Q96GT9 111 aa24.38■■□□□ 1.49
SREBF1-216ENST00000490796 BCAR3O75815 825 aa24.37■■□□□ 1.49
SREBF1-216ENST00000490796 G3BP1Q13283 466 aaKnown RBP eCLIP24.37■■□□□ 1.49
SREBF1-216ENST00000490796 KIF22Q14807 665 aa24.37■■□□□ 1.49
SREBF1-216ENST00000490796 ZSCAN29Q8IWY8 852 aaPredicted RBP24.37■■□□□ 1.49
SREBF1-216ENST00000490796 ZCCHC17Q9NP64 241 aaKnown RBP24.37■■□□□ 1.49
SREBF1-216ENST00000490796 ZBTB22O15209 634 aa24.36■■□□□ 1.49
SREBF1-216ENST00000490796 FAM198AQ9UFP1 575 aa24.36■■□□□ 1.49
SREBF1-216ENST00000490796 PDS5AQ29RF7 1337 aaKnown RBP24.35■■□□□ 1.49
SREBF1-216ENST00000490796 BTBD19C9JJ37 291 aa24.35■■□□□ 1.49
SREBF1-216ENST00000490796 ERICH6Q7L0X2 663 aa24.35■■□□□ 1.49
SREBF1-216ENST00000490796 TLR2O60603 784 aa24.34■■□□□ 1.49
SREBF1-216ENST00000490796 RGS3P49796 1198 aa24.34■■□□□ 1.49
SREBF1-216ENST00000490796 ZKSCAN2Q63HK3 967 aa24.34■■□□□ 1.49
SREBF1-216ENST00000490796 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.34■■□□□ 1.49
SREBF1-216ENST00000490796 ZNF112Q9UJU3 913 aa24.34■■□□□ 1.49
SREBF1-216ENST00000490796 TNRC18O15417 2968 aaPredicted RBP24.33■■□□□ 1.49
SREBF1-216ENST00000490796 ENTPD3O75355 529 aa24.33■■□□□ 1.49
SREBF1-216ENST00000490796 IDI2Q9BXS1 227 aa24.33■■□□□ 1.49
SREBF1-216ENST00000490796 TNNQ9UQP3 1299 aa24.33■■□□□ 1.49
SREBF1-216ENST00000490796 GAKO14976 1311 aa24.33■■□□□ 1.48
SREBF1-216ENST00000490796 BTDP43251 543 aa24.32■■□□□ 1.48
SREBF1-216ENST00000490796 HNRNPUQ00839 825 aaKnown RBP eCLIP24.32■■□□□ 1.48
SREBF1-216ENST00000490796 NBPF11Q86T75 865 aa24.32■■□□□ 1.48
SREBF1-216ENST00000490796 ZFPM1Q8IX07 1006 aa24.32■■□□□ 1.48
SREBF1-216ENST00000490796 PICK1Q9NRD5 415 aa24.32■■□□□ 1.48
SREBF1-216ENST00000490796 GSTO1P78417 241 aa24.31■■□□□ 1.48
SREBF1-216ENST00000490796 OS9Q13438 667 aaPredicted RBP24.31■■□□□ 1.48
SREBF1-216ENST00000490796 PICALMQ13492 652 aa24.31■■□□□ 1.48
SREBF1-216ENST00000490796 NOL9Q5SY16 702 aaKnown RBP24.31■■□□□ 1.48
SREBF1-216ENST00000490796 TMEM106CQ9BVX2 250 aa24.31■■□□□ 1.48
SREBF1-216ENST00000490796 KIAA0100Q14667 2235 aaKnown RBP24.31■■□□□ 1.48
SREBF1-216ENST00000490796 MYH2Q9UKX2 1941 aa24.31■■□□□ 1.48
SREBF1-216ENST00000490796 LDHCP07864 332 aa24.3■■□□□ 1.48
SREBF1-216ENST00000490796 SLC9C1Q4G0N8 1177 aa24.3■■□□□ 1.48
SREBF1-216ENST00000490796 PRPF38BQ5VTL8 546 aaKnown RBP24.3■■□□□ 1.48
SREBF1-216ENST00000490796 ANKRD23Q86SG2 305 aa24.3■■□□□ 1.48
SREBF1-216ENST00000490796 FTSJ3Q8IY81 847 aaKnown RBP24.3■■□□□ 1.48
SREBF1-216ENST00000490796 TMEM57Q8N5G2 664 aa24.3■■□□□ 1.48
SREBF1-216ENST00000490796 ARMC5Q96C12 935 aa24.3■■□□□ 1.48
SREBF1-216ENST00000490796 FAM163AQ96GL9 167 aaPredicted RBP24.3■■□□□ 1.48
SREBF1-216ENST00000490796 KCNH4Q9UQ05 1017 aa24.3■■□□□ 1.48
SREBF1-216ENST00000490796 MROH7-TTC4A0A0A0MT08 1334 aa24.3■■□□□ 1.48
SREBF1-216ENST00000490796 PNMA6EA0A0J9YXQ4 647 aa24.29■■□□□ 1.48
SREBF1-216ENST00000490796 PDHXO00330 501 aa24.29■■□□□ 1.48
SREBF1-216ENST00000490796 MECOMQ03112 1051 aa24.29■■□□□ 1.48
SREBF1-216ENST00000490796 SPATA5Q8NB90 893 aa24.29■■□□□ 1.48
SREBF1-216ENST00000490796 RAI14Q9P0K7 980 aa24.29■■□□□ 1.48
SREBF1-216ENST00000490796 HMG20BQ9P0W2 317 aa24.29■■□□□ 1.48
SREBF1-216ENST00000490796 UQCRFS1P1P0C7P4 283 aa24.28■■□□□ 1.48
SREBF1-216ENST00000490796 LACTBP83111 547 aaPredicted RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms