RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 MXD3Q9BW11 206 aa13.15□□□□□ -0.3
VARS2-210ENST00000490699 MRIQ9BWK5 157 aa13.15□□□□□ -0.3
VARS2-210ENST00000490699 MYH2Q9UKX2 1941 aa13.14□□□□□ -0.31
VARS2-210ENST00000490699 GNAT2P19087 354 aa13.14□□□□□ -0.31
VARS2-210ENST00000490699 NMIQ13287 307 aaPredicted RBP13.14□□□□□ -0.31
VARS2-210ENST00000490699 ZMYM1Q5SVZ6 1142 aa13.14□□□□□ -0.31
VARS2-210ENST00000490699 AMOTL1Q8IY63 956 aa13.14□□□□□ -0.31
VARS2-210ENST00000490699 CRNKL1Q9BZJ0 848 aaKnown RBP13.14□□□□□ -0.31
VARS2-210ENST00000490699 CNOT7Q9UIV1 285 aaKnown RBP13.14□□□□□ -0.31
VARS2-210ENST00000490699 MYO5AQ9Y4I1 1855 aaKnown RBP13.14□□□□□ -0.31
VARS2-210ENST00000490699 GLTPD2A6NH11 291 aa13.13□□□□□ -0.31
VARS2-210ENST00000490699 BTDP43251 543 aa13.13□□□□□ -0.31
VARS2-210ENST00000490699 DIXDC1Q155Q3 683 aa13.13□□□□□ -0.31
VARS2-210ENST00000490699 MICALL2Q8IY33 904 aa13.13□□□□□ -0.31
VARS2-210ENST00000490699 FAM163AQ96GL9 167 aaPredicted RBP13.13□□□□□ -0.31
VARS2-210ENST00000490699 ZDHHC15Q96MV8 337 aa13.13□□□□□ -0.31
VARS2-210ENST00000490699 NACAP1Q9BZK3 213 aa13.13□□□□□ -0.31
VARS2-210ENST00000490699 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
VARS2-210ENST00000490699 ZNF646O15015 1829 aaPredicted RBP13.12□□□□□ -0.31
VARS2-210ENST00000490699 DDNO94850 711 aaPredicted RBP13.12□□□□□ -0.31
VARS2-210ENST00000490699 MBD4O95243 580 aa13.12□□□□□ -0.31
VARS2-210ENST00000490699 APPP05067 770 aa13.12□□□□□ -0.31
VARS2-210ENST00000490699 CFAP100Q494V2 611 aa13.12□□□□□ -0.31
VARS2-210ENST00000490699 MIGA1Q8NAN2 632 aa13.12□□□□□ -0.31
VARS2-210ENST00000490699 FAM227BQ96M60 508 aa13.12□□□□□ -0.31
VARS2-210ENST00000490699 GMLQ99445 158 aa13.12□□□□□ -0.31
VARS2-210ENST00000490699 ESYT1Q9BSJ8 1104 aa13.12□□□□□ -0.31
VARS2-210ENST00000490699 MYOZ2Q9NPC6 264 aa13.12□□□□□ -0.31
VARS2-210ENST00000490699 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.31
VARS2-210ENST00000490699 GPRC5DQ9NZD1 345 aa13.12□□□□□ -0.31
VARS2-210ENST00000490699 HACL1Q9UJ83 578 aa13.12□□□□□ -0.31
VARS2-210ENST00000490699 DAGLAQ9Y4D2 1042 aa13.12□□□□□ -0.31
VARS2-210ENST00000490699 GAKO14976 1311 aa13.12□□□□□ -0.31
VARS2-210ENST00000490699 GPR75-ASB3A0A0A6YYF3 556 aa13.11□□□□□ -0.31
VARS2-210ENST00000490699 A0A0D9SFI3 127 aa13.11□□□□□ -0.31
VARS2-210ENST00000490699 TCRBV5S4A2TA0A5A2 114 aa13.11□□□□□ -0.31
VARS2-210ENST00000490699 GPAA1O43292 621 aa13.11□□□□□ -0.31
VARS2-210ENST00000490699 MCCP23508 829 aa13.11□□□□□ -0.31
VARS2-210ENST00000490699 USP5P45974 858 aa13.11□□□□□ -0.31
VARS2-210ENST00000490699 ZNF280AP59817 542 aaPredicted RBP13.11□□□□□ -0.31
VARS2-210ENST00000490699 KIF4BQ2VIQ3 1234 aa13.11□□□□□ -0.31
VARS2-210ENST00000490699 CHADLQ6NUI6 762 aa13.11□□□□□ -0.31
VARS2-210ENST00000490699 ANO2Q9NQ90 1003 aa13.11□□□□□ -0.31
VARS2-210ENST00000490699 ADARB2Q9NS39 739 aaKnown RBP13.11□□□□□ -0.31
VARS2-210ENST00000490699 RPAP1Q9BWH6 1393 aaPredicted RBP13.1□□□□□ -0.31
VARS2-210ENST00000490699 SGSM2O43147 1006 aa13.1□□□□□ -0.31
VARS2-210ENST00000490699 TNNI2P48788 182 aa13.1□□□□□ -0.31
VARS2-210ENST00000490699 PPP4CP60510 307 aa13.1□□□□□ -0.31
VARS2-210ENST00000490699 TNFAIP1Q13829 316 aa13.1□□□□□ -0.31
VARS2-210ENST00000490699 GRIK5Q16478 980 aa13.1□□□□□ -0.31
VARS2-210ENST00000490699 RBM26Q5T8P6 1007 aaKnown RBP13.1□□□□□ -0.31
VARS2-210ENST00000490699 TEX11Q8IYF3 940 aa13.1□□□□□ -0.31
VARS2-210ENST00000490699 MTMR14Q8NCE2 650 aa13.1□□□□□ -0.31
VARS2-210ENST00000490699 OSBP2Q969R2 916 aa13.1□□□□□ -0.31
VARS2-210ENST00000490699 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
VARS2-210ENST00000490699 ARMT1Q9H993 441 aa13.1□□□□□ -0.31
VARS2-210ENST00000490699 USP40Q9NVE5 1235 aa13.1□□□□□ -0.31
VARS2-210ENST00000490699 SLC4A4Q9Y6R1 1079 aa13.1□□□□□ -0.31
VARS2-210ENST00000490699 GOLGB1Q14789 3259 aaKnown RBP13.09□□□□□ -0.31
VARS2-210ENST00000490699 M0R2C6 588 aa13.09□□□□□ -0.31
VARS2-210ENST00000490699 TDO2P48775 406 aa13.09□□□□□ -0.31
VARS2-210ENST00000490699 PNMA8AQ86V59 439 aaPredicted RBP13.09□□□□□ -0.31
VARS2-210ENST00000490699 PUS7LQ9H0K6 701 aaKnown RBP13.09□□□□□ -0.31
VARS2-210ENST00000490699 ATP8A2Q9NTI2 1148 aa13.09□□□□□ -0.31
VARS2-210ENST00000490699 CTNNA3Q9UI47 895 aa13.09□□□□□ -0.31
VARS2-210ENST00000490699 SCN4AP35499 1836 aa13.09□□□□□ -0.31
VARS2-210ENST00000490699 TBC1D10BQ4KMP7 808 aaPredicted RBP13.08□□□□□ -0.32
VARS2-210ENST00000490699 RNF20Q5VTR2 975 aa13.08□□□□□ -0.32
VARS2-210ENST00000490699 USP50Q70EL3 339 aaPredicted RBP13.08□□□□□ -0.32
VARS2-210ENST00000490699 ADGRA1Q86SQ6 560 aa13.08□□□□□ -0.32
VARS2-210ENST00000490699 LCORLQ8N3X6 602 aa13.08□□□□□ -0.32
VARS2-210ENST00000490699 SEC62Q99442 399 aaKnown RBP13.08□□□□□ -0.32
VARS2-210ENST00000490699 NAPBQ9H115 298 aa13.08□□□□□ -0.32
VARS2-210ENST00000490699 VEZTQ9HBM0 779 aa13.08□□□□□ -0.32
VARS2-210ENST00000490699 PATL2C9JE40 543 aaKnown RBP13.07□□□□□ -0.32
VARS2-210ENST00000490699 EPB41L2O43491 1005 aaKnown RBP13.07□□□□□ -0.32
VARS2-210ENST00000490699 SLC3A2P08195 630 aaKnown RBP13.07□□□□□ -0.32
VARS2-210ENST00000490699 VEGFAP15692 232 aaPredicted RBP13.07□□□□□ -0.32
VARS2-210ENST00000490699 EPHX2P34913 555 aa13.07□□□□□ -0.32
VARS2-210ENST00000490699 DYNLL1P63167 89 aaKnown RBP13.07□□□□□ -0.32
VARS2-210ENST00000490699 GIMAP6Q6P9H5 292 aa13.07□□□□□ -0.32
VARS2-210ENST00000490699 CCDC129Q6ZRS4 1044 aa13.07□□□□□ -0.32
VARS2-210ENST00000490699 APOBEC3FQ8IUX4 373 aaKnown RBP13.07□□□□□ -0.32
VARS2-210ENST00000490699 SH3RF3Q8TEJ3 882 aaPredicted RBP13.07□□□□□ -0.32
VARS2-210ENST00000490699 ZNF384Q8TF68 577 aa13.07□□□□□ -0.32
VARS2-210ENST00000490699 STRBPQ96SI9 672 aaKnown RBP13.07□□□□□ -0.32
VARS2-210ENST00000490699 RIOK1Q9BRS2 568 aaKnown RBP13.07□□□□□ -0.32
VARS2-210ENST00000490699 DSCC1Q9BVC3 393 aa13.07□□□□□ -0.32
VARS2-210ENST00000490699 WDR90Q96KV7 1748 aa13.07□□□□□ -0.32
VARS2-210ENST00000490699 ECM29Q5VYK3 1845 aa13.06□□□□□ -0.32
VARS2-210ENST00000490699 WNT10BO00744 389 aa13.06□□□□□ -0.32
VARS2-210ENST00000490699 HLA-DOAP06340 250 aa13.06□□□□□ -0.32
VARS2-210ENST00000490699 EPS15P42566 896 aa13.06□□□□□ -0.32
VARS2-210ENST00000490699 PICALMQ13492 652 aa13.06□□□□□ -0.32
VARS2-210ENST00000490699 SLFNL1Q499Z3 407 aa13.06□□□□□ -0.32
VARS2-210ENST00000490699 C8orf34Q49A92 452 aa13.06□□□□□ -0.32
VARS2-210ENST00000490699 APOBEC3HQ6NTF7 200 aaKnown RBP13.06□□□□□ -0.32
VARS2-210ENST00000490699 CDC42EP5Q6NZY7 148 aa13.06□□□□□ -0.32
VARS2-210ENST00000490699 SAMD7Q7Z3H4 446 aa13.06□□□□□ -0.32
VARS2-210ENST00000490699 ZNF589Q86UQ0 364 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms