RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 TMEM39BQ9GZU3 492 aa14.66□□□□□ -0.06
SEMA6C-208ENST00000489944 CHMP4BQ9H444 224 aaKnown RBP14.66□□□□□ -0.06
SEMA6C-208ENST00000489944 DAGLAQ9Y4D2 1042 aa14.66□□□□□ -0.06
SEMA6C-208ENST00000489944 GAKO14976 1311 aa14.66□□□□□ -0.06
SEMA6C-208ENST00000489944 AOX1Q06278 1338 aa14.66□□□□□ -0.06
SEMA6C-208ENST00000489944 SPDYE5A6NIY4 337 aa14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 LDHCP07864 332 aa14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 PRDX5P30044 214 aa14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 GSTO1P78417 241 aa14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 ATP8B2P98198 1209 aa14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 TFCP2Q12800 502 aa14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 POLA2Q14181 598 aa14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 GORABQ5T7V8 394 aa14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 ERO1BQ86YB8 467 aa14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 TMEM57Q8N5G2 664 aa14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 ZNF296Q8WUU4 475 aaPredicted RBP14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 XAGE2Q96GT9 111 aa14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 CLMNQ96JQ2 1002 aa14.65□□□□□ -0.06
SEMA6C-208ENST00000489944 CCDC85CA6NKD9 419 aa14.64□□□□□ -0.07
SEMA6C-208ENST00000489944 ARID4AP29374 1257 aaPredicted RBP14.64□□□□□ -0.07
SEMA6C-208ENST00000489944 TIMM10P62072 90 aa14.64□□□□□ -0.07
SEMA6C-208ENST00000489944 RASGRF1Q13972 1273 aa14.64□□□□□ -0.07
SEMA6C-208ENST00000489944 VGLL4Q14135 290 aa14.64□□□□□ -0.07
SEMA6C-208ENST00000489944 CDC42EP5Q6NZY7 148 aa14.64□□□□□ -0.07
SEMA6C-208ENST00000489944 DZIP1Q86YF9 867 aaKnown RBP14.64□□□□□ -0.07
SEMA6C-208ENST00000489944 CLUAP1Q96AJ1 413 aa14.64□□□□□ -0.07
SEMA6C-208ENST00000489944 OPTNQ96CV9 577 aa14.64□□□□□ -0.07
SEMA6C-208ENST00000489944 ERO1AQ96HE7 468 aa14.64□□□□□ -0.07
SEMA6C-208ENST00000489944 ZNF512BQ96KM6 892 aaPredicted RBP14.64□□□□□ -0.07
SEMA6C-208ENST00000489944 NOP58Q9Y2X3 529 aaKnown RBP14.64□□□□□ -0.07
SEMA6C-208ENST00000489944 TBC1D8O95759 1140 aa14.63□□□□□ -0.07
SEMA6C-208ENST00000489944 CETPP11597 493 aa14.63□□□□□ -0.07
SEMA6C-208ENST00000489944 PPATQ06203 517 aa14.63□□□□□ -0.07
SEMA6C-208ENST00000489944 FBXO46Q6PJ61 603 aaPredicted RBP14.63□□□□□ -0.07
SEMA6C-208ENST00000489944 ERICH6Q7L0X2 663 aa14.63□□□□□ -0.07
SEMA6C-208ENST00000489944 MS4A4AQ96JQ5 239 aa14.63□□□□□ -0.07
SEMA6C-208ENST00000489944 ZNF112Q9UJU3 913 aa14.63□□□□□ -0.07
SEMA6C-208ENST00000489944 PNMA6EA0A0J9YXQ4 647 aa14.62□□□□□ -0.07
SEMA6C-208ENST00000489944 ZBTB7BO15156 539 aaPredicted RBP14.62□□□□□ -0.07
SEMA6C-208ENST00000489944 MKRN3Q13064 507 aaKnown RBP14.62□□□□□ -0.07
SEMA6C-208ENST00000489944 PPIL2Q13356 520 aa14.62□□□□□ -0.07
SEMA6C-208ENST00000489944 HSP90AB4PQ58FF6 505 aa14.62□□□□□ -0.07
SEMA6C-208ENST00000489944 CCDC158Q5M9N0 1113 aa14.62□□□□□ -0.07
SEMA6C-208ENST00000489944 NOL9Q5SY16 702 aaKnown RBP14.62□□□□□ -0.07
SEMA6C-208ENST00000489944 ERC1Q8IUD2 1116 aa14.62□□□□□ -0.07
SEMA6C-208ENST00000489944 SPATA5Q8NB90 893 aa14.62□□□□□ -0.07
SEMA6C-208ENST00000489944 NEUROD6Q96NK8 337 aa14.62□□□□□ -0.07
SEMA6C-208ENST00000489944 WRNIP1Q96S55 665 aa14.62□□□□□ -0.07
SEMA6C-208ENST00000489944 ELP3Q9H9T3 547 aa14.62□□□□□ -0.07
SEMA6C-208ENST00000489944 USP40Q9NVE5 1235 aa14.62□□□□□ -0.07
SEMA6C-208ENST00000489944 GPR75-ASB3A0A0A6YYF3 556 aa14.61□□□□□ -0.07
SEMA6C-208ENST00000489944 IGF2BP3O00425 579 aaKnown RBP eCLIP14.61□□□□□ -0.07
SEMA6C-208ENST00000489944 ADORA1P30542 326 aa14.61□□□□□ -0.07
SEMA6C-208ENST00000489944 MAP3K10Q02779 954 aa14.61□□□□□ -0.07
SEMA6C-208ENST00000489944 SNAPC2Q13487 334 aa14.61□□□□□ -0.07
SEMA6C-208ENST00000489944 DIXDC1Q155Q3 683 aa14.61□□□□□ -0.07
SEMA6C-208ENST00000489944 CERS3Q8IU89 383 aa14.61□□□□□ -0.07
SEMA6C-208ENST00000489944 ITPRIPQ8IWB1 547 aa14.61□□□□□ -0.07
SEMA6C-208ENST00000489944 ZFYVE28Q9HCC9 887 aa14.61□□□□□ -0.07
SEMA6C-208ENST00000489944 ABCF2Q9UG63 623 aa14.61□□□□□ -0.07
SEMA6C-208ENST00000489944 OTOFQ9HC10 1997 aa14.61□□□□□ -0.07
SEMA6C-208ENST00000489944 MROH7-TTC4A0A0A0MT08 1334 aa14.61□□□□□ -0.07
SEMA6C-208ENST00000489944 GJA5P36382 358 aa14.6□□□□□ -0.07
SEMA6C-208ENST00000489944 CACNB3P54284 484 aa14.6□□□□□ -0.07
SEMA6C-208ENST00000489944 MLLT1Q03111 559 aaPredicted RBP14.6□□□□□ -0.07
SEMA6C-208ENST00000489944 HMG20BQ9P0W2 317 aa14.6□□□□□ -0.07
SEMA6C-208ENST00000489944 FZD1Q9UP38 647 aa14.6□□□□□ -0.07
SEMA6C-208ENST00000489944 SNCAIPQ9Y6H5 919 aa14.6□□□□□ -0.07
SEMA6C-208ENST00000489944 COL2A1P02458 1487 aaPredicted RBP14.6□□□□□ -0.07
SEMA6C-208ENST00000489944 CCL15-CCL14A0A0B4J2E2 113 aa14.59□□□□□ -0.07
SEMA6C-208ENST00000489944 TBC1D12O60347 775 aa14.59□□□□□ -0.07
SEMA6C-208ENST00000489944 SURF6O75683 361 aaKnown RBP14.59□□□□□ -0.07
SEMA6C-208ENST00000489944 GNRH1P01148 92 aa14.59□□□□□ -0.07
SEMA6C-208ENST00000489944 PLCG2P16885 1265 aa14.59□□□□□ -0.07
SEMA6C-208ENST00000489944 OS9Q13438 667 aaPredicted RBP14.59□□□□□ -0.07
SEMA6C-208ENST00000489944 CCL15Q16663 113 aa14.59□□□□□ -0.07
SEMA6C-208ENST00000489944 TNNI3KQ59H18 835 aa14.59□□□□□ -0.07
SEMA6C-208ENST00000489944 OTUD5Q96G74 571 aa14.59□□□□□ -0.07
SEMA6C-208ENST00000489944 TBC1D2Q9BYX2 928 aa14.59□□□□□ -0.07
SEMA6C-208ENST00000489944 FAM198AQ9UFP1 575 aa14.59□□□□□ -0.07
SEMA6C-208ENST00000489944 FPGT-TNNI3KV9GXZ4 949 aa14.59□□□□□ -0.07
SEMA6C-208ENST00000489944 RFX7Q2KHR2 1363 aa14.59□□□□□ -0.07
SEMA6C-208ENST00000489944 MYH2Q9UKX2 1941 aa14.58□□□□□ -0.07
SEMA6C-208ENST00000489944 CXCL11O14625 94 aa14.58□□□□□ -0.08
SEMA6C-208ENST00000489944 SP3Q02447 781 aa14.58□□□□□ -0.08
SEMA6C-208ENST00000489944 MECOMQ03112 1051 aa14.58□□□□□ -0.08
SEMA6C-208ENST00000489944 CRHR2Q13324 411 aa14.58□□□□□ -0.08
SEMA6C-208ENST00000489944 CDAN1Q8IWY9 1227 aa14.58□□□□□ -0.08
SEMA6C-208ENST00000489944 BRI3BPQ8WY22 251 aa14.58□□□□□ -0.08
SEMA6C-208ENST00000489944 PTPN18Q99952 460 aa14.58□□□□□ -0.08
SEMA6C-208ENST00000489944 NOL10Q9BSC4 688 aaKnown RBP14.58□□□□□ -0.08
SEMA6C-208ENST00000489944 DDX19BQ9UMR2 479 aa14.58□□□□□ -0.08
SEMA6C-208ENST00000489944 KCNH4Q9UQ05 1017 aa14.58□□□□□ -0.08
SEMA6C-208ENST00000489944 ATRNL1Q5VV63 1379 aa14.58□□□□□ -0.08
SEMA6C-208ENST00000489944 HMMRO75330 724 aa14.57□□□□□ -0.08
SEMA6C-208ENST00000489944 BAG3O95817 575 aa14.57□□□□□ -0.08
SEMA6C-208ENST00000489944 BTDP43251 543 aa14.57□□□□□ -0.08
SEMA6C-208ENST00000489944 RGS3P49796 1198 aa14.57□□□□□ -0.08
SEMA6C-208ENST00000489944 NFIAQ12857 509 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms