RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 UBE2Q2LH0YL09 131 aa14.99□□□□□ -0.01
SMARCD3-213ENST00000489503 AOC2O75106 756 aa14.99□□□□□ -0.01
SMARCD3-213ENST00000489503 BTDP43251 543 aa14.99□□□□□ -0.01
SMARCD3-213ENST00000489503 TSHZ3Q63HK5 1081 aa14.99□□□□□ -0.01
SMARCD3-213ENST00000489503 EDC3Q96F86 508 aaKnown RBP14.99□□□□□ -0.01
SMARCD3-213ENST00000489503 TEPSINQ96N21 525 aa14.99□□□□□ -0.01
SMARCD3-213ENST00000489503 DNAJC2Q99543 621 aaKnown RBP14.99□□□□□ -0.01
SMARCD3-213ENST00000489503 MRIQ9BWK5 157 aa14.99□□□□□ -0.01
SMARCD3-213ENST00000489503 TMOD2Q9NZR1 351 aa14.99□□□□□ -0.01
SMARCD3-213ENST00000489503 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.99□□□□□ -0.01
SMARCD3-213ENST00000489503 RFX7Q2KHR2 1363 aa14.98□□□□□ -0.01
SMARCD3-213ENST00000489503 WDR33Q9C0J8 1336 aaKnown RBP14.98□□□□□ -0.01
SMARCD3-213ENST00000489503 NF2P35240 595 aa14.98□□□□□ -0.01
SMARCD3-213ENST00000489503 TCP10Q12799 353 aa14.98□□□□□ -0.01
SMARCD3-213ENST00000489503 TNFAIP1Q13829 316 aa14.98□□□□□ -0.01
SMARCD3-213ENST00000489503 ADGRA1Q86SQ6 560 aa14.98□□□□□ -0.01
SMARCD3-213ENST00000489503 JMYQ8N9B5 988 aa14.98□□□□□ -0.01
SMARCD3-213ENST00000489503 OTUD7AQ8TE49 926 aaPredicted RBP14.98□□□□□ -0.01
SMARCD3-213ENST00000489503 USP40Q9NVE5 1235 aa14.98□□□□□ -0.01
SMARCD3-213ENST00000489503 PPP2R3BQ9Y5P8 575 aa14.98□□□□□ -0.01
SMARCD3-213ENST00000489503 IDH1O75874 414 aaKnown RBP14.97□□□□□ -0.01
SMARCD3-213ENST00000489503 ZIC5Q96T25 663 aa14.97□□□□□ -0.01
SMARCD3-213ENST00000489503 BOLA2Q9H3K6 86 aa14.97□□□□□ -0.01
SMARCD3-213ENST00000489503 FAM198AQ9UFP1 575 aa14.97□□□□□ -0.01
SMARCD3-213ENST00000489503 ANGEL1Q9UNK9 670 aaKnown RBP14.97□□□□□ -0.01
SMARCD3-213ENST00000489503 GOLIM4O00461 696 aa14.96□□□□□ -0.01
SMARCD3-213ENST00000489503 TNNI2P48788 182 aa14.96□□□□□ -0.01
SMARCD3-213ENST00000489503 NAA16Q6N069 864 aaPredicted RBP14.96□□□□□ -0.01
SMARCD3-213ENST00000489503 RGMBQ6NW40 437 aa14.96□□□□□ -0.01
SMARCD3-213ENST00000489503 ZFPM1Q8IX07 1006 aa14.96□□□□□ -0.01
SMARCD3-213ENST00000489503 CDK5RAP2Q96SN8 1893 aa14.96□□□□□ -0.01
SMARCD3-213ENST00000489503 AK9Q5TCS8 1911 aa14.96□□□□□ -0.02
SMARCD3-213ENST00000489503 GPR75-ASB3A0A0A6YYF3 556 aa14.95□□□□□ -0.02
SMARCD3-213ENST00000489503 RGS3P49796 1198 aa14.95□□□□□ -0.02
SMARCD3-213ENST00000489503 ZNF157P51786 506 aaPredicted RBP14.95□□□□□ -0.02
SMARCD3-213ENST00000489503 RHBDL3P58872 404 aa14.95□□□□□ -0.02
SMARCD3-213ENST00000489503 GSTO1P78417 241 aa14.95□□□□□ -0.02
SMARCD3-213ENST00000489503 PICALMQ13492 652 aa14.95□□□□□ -0.02
SMARCD3-213ENST00000489503 HDAC1Q13547 482 aaPredicted RBP14.95□□□□□ -0.02
SMARCD3-213ENST00000489503 RASAL3Q86YV0 1011 aa14.95□□□□□ -0.02
SMARCD3-213ENST00000489503 SLF2Q8IX21 1173 aa14.95□□□□□ -0.02
SMARCD3-213ENST00000489503 FAM163AQ96GL9 167 aaPredicted RBP14.95□□□□□ -0.02
SMARCD3-213ENST00000489503 DDX4Q9NQI0 724 aaKnown RBP14.95□□□□□ -0.02
SMARCD3-213ENST00000489503 RPAP1Q9BWH6 1393 aaPredicted RBP14.95□□□□□ -0.02
SMARCD3-213ENST00000489503 FAM155AB1AL88 458 aaPredicted RBP14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 WDHD1O75717 1129 aaPredicted RBP14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 ECE1P42892 770 aa14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 FKBP1BP68106 108 aa14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 MKRN3Q13064 507 aaKnown RBP14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 SUPT20HL1Q3ZLR7 823 aa14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 FKBP1CQ5VVH2 108 aa14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 ARMC9Q7Z3E5 817 aa14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 FAM83AQ86UY5 434 aa14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 MAGEB6Q8N7X4 407 aa14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 SH3RF3Q8TEJ3 882 aaPredicted RBP14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 HHIPL1Q96JK4 782 aa14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 CLMNQ96JQ2 1002 aa14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 AATFQ9NY61 560 aaKnown RBP eCLIP14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 MYH7P12883 1935 aa14.94□□□□□ -0.02
SMARCD3-213ENST00000489503 IGHDP01880 384 aa14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 CHGBP05060 677 aa14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 LDHCP07864 332 aa14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 SLC10A3P09131 477 aa14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 HSPA1AP0DMV8 641 aaKnown RBP14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 HSPA1BP0DMV9 641 aaKnown RBP14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 SLURP2P0DP57 97 aa14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 ATP5JP18859 108 aa14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 CYP7A1P22680 504 aa14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 DYNLL1P63167 89 aaKnown RBP14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 SLFNL1Q499Z3 407 aa14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 ANKRD45Q5TZF3 282 aa14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 MIGA1Q8NAN2 632 aa14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 ECHDC1Q9NTX5 307 aa14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 PAG1Q9NWQ8 432 aa14.93□□□□□ -0.02
SMARCD3-213ENST00000489503 FOCADQ5VW36 1801 aa14.92□□□□□ -0.02
SMARCD3-213ENST00000489503 USP2O75604 605 aaPredicted RBP14.92□□□□□ -0.02
SMARCD3-213ENST00000489503 B4GALNT3Q6L9W6 998 aa14.92□□□□□ -0.02
SMARCD3-213ENST00000489503 SH3BP5LQ7L8J4 393 aa14.92□□□□□ -0.02
SMARCD3-213ENST00000489503 TEX11Q8IYF3 940 aa14.92□□□□□ -0.02
SMARCD3-213ENST00000489503 FAM151AQ8WW52 585 aa14.92□□□□□ -0.02
SMARCD3-213ENST00000489503 HAUS7Q99871 368 aa14.92□□□□□ -0.02
SMARCD3-213ENST00000489503 PPP1R12BO60237 982 aaPredicted RBP14.91□□□□□ -0.02
SMARCD3-213ENST00000489503 MAP4K4O95819 1239 aaPredicted RBP14.91□□□□□ -0.02
SMARCD3-213ENST00000489503 PDE6AP16499 860 aa14.91□□□□□ -0.02
SMARCD3-213ENST00000489503 MAP3K12Q12852 859 aa14.91□□□□□ -0.02
SMARCD3-213ENST00000489503 AAMPQ13685 434 aa14.91□□□□□ -0.02
SMARCD3-213ENST00000489503 LDLRAD1Q5T700 205 aa14.91□□□□□ -0.02
SMARCD3-213ENST00000489503 MIGA2Q7L4E1 593 aa14.91□□□□□ -0.02
SMARCD3-213ENST00000489503 NOL10Q9BSC4 688 aaKnown RBP14.91□□□□□ -0.02
SMARCD3-213ENST00000489503 IDI2Q9BXS1 227 aa14.91□□□□□ -0.02
SMARCD3-213ENST00000489503 SIPA1L1O43166 1804 aa14.91□□□□□ -0.02
SMARCD3-213ENST00000489503 ATRNL1Q5VV63 1379 aa14.9□□□□□ -0.02
SMARCD3-213ENST00000489503 DDTLA6NHG4 134 aaPredicted RBP14.9□□□□□ -0.02
SMARCD3-213ENST00000489503 IREB2P48200 963 aaKnown RBP14.9□□□□□ -0.02
SMARCD3-213ENST00000489503 KIF23Q02241 960 aaPredicted RBP14.9□□□□□ -0.02
SMARCD3-213ENST00000489503 TTF1Q15361 905 aaPredicted RBP14.9□□□□□ -0.02
SMARCD3-213ENST00000489503 MAP3K11Q16584 847 aa14.9□□□□□ -0.02
SMARCD3-213ENST00000489503 ZSCAN29Q8IWY8 852 aaPredicted RBP14.9□□□□□ -0.02
SMARCD3-213ENST00000489503 GCC1Q96CN9 775 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms