RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 KIAA0100Q14667 2235 aaKnown RBP16.65■□□□□ 0.26
LINC00173-204ENST00000489452 IRF6O14896 467 aa16.65■□□□□ 0.26
LINC00173-204ENST00000489452 CIAO1O76071 339 aa16.65■□□□□ 0.26
LINC00173-204ENST00000489452 LDHBP07195 334 aaKnown RBP16.65■□□□□ 0.26
LINC00173-204ENST00000489452 CETPP11597 493 aa16.65■□□□□ 0.26
LINC00173-204ENST00000489452 ADORA1P30542 326 aa16.65■□□□□ 0.26
LINC00173-204ENST00000489452 INPP5BP32019 993 aa16.65■□□□□ 0.26
LINC00173-204ENST00000489452 PHKA1P46020 1223 aa16.65■□□□□ 0.26
LINC00173-204ENST00000489452 NFIAQ12857 509 aa16.65■□□□□ 0.26
LINC00173-204ENST00000489452 FAM151AQ8WW52 585 aa16.65■□□□□ 0.26
LINC00173-204ENST00000489452 MEIS3Q99687 375 aa16.65■□□□□ 0.26
LINC00173-204ENST00000489452 ZNF341Q9BYN7 854 aa16.65■□□□□ 0.26
LINC00173-204ENST00000489452 BTBD19C9JJ37 291 aa16.64■□□□□ 0.25
LINC00173-204ENST00000489452 WDHD1O75717 1129 aaPredicted RBP16.64■□□□□ 0.25
LINC00173-204ENST00000489452 IL15P40933 162 aaPredicted RBP16.64■□□□□ 0.25
LINC00173-204ENST00000489452 TIMM10P62072 90 aa16.64■□□□□ 0.25
LINC00173-204ENST00000489452 SNAPC2Q13487 334 aa16.64■□□□□ 0.25
LINC00173-204ENST00000489452 PRPF38BQ5VTL8 546 aaKnown RBP16.64■□□□□ 0.25
LINC00173-204ENST00000489452 INTS3Q68E01 1043 aaKnown RBP16.64■□□□□ 0.25
LINC00173-204ENST00000489452 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
LINC00173-204ENST00000489452 OTOFQ9HC10 1997 aa16.64■□□□□ 0.25
LINC00173-204ENST00000489452 MYCP01106 439 aaPredicted RBP16.63■□□□□ 0.25
LINC00173-204ENST00000489452 CT47B1P0C2W7 299 aaPredicted RBP16.63■□□□□ 0.25
LINC00173-204ENST00000489452 RARSP54136 660 aaKnown RBP16.63■□□□□ 0.25
LINC00173-204ENST00000489452 ARHGEF6Q15052 776 aa16.63■□□□□ 0.25
LINC00173-204ENST00000489452 ZFPM1Q8IX07 1006 aa16.63■□□□□ 0.25
LINC00173-204ENST00000489452 DENND2AQ9ULE3 1009 aa16.63■□□□□ 0.25
LINC00173-204ENST00000489452 HDAC5Q9UQL6 1122 aa16.63■□□□□ 0.25
LINC00173-204ENST00000489452 ARAP2Q8WZ64 1704 aa16.62■□□□□ 0.25
LINC00173-204ENST00000489452 EN2P19622 333 aaPredicted RBP16.62■□□□□ 0.25
LINC00173-204ENST00000489452 PPIL2Q13356 520 aa16.62■□□□□ 0.25
LINC00173-204ENST00000489452 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.62■□□□□ 0.25
LINC00173-204ENST00000489452 ARHGAP39Q9C0H5 1083 aa16.62■□□□□ 0.25
LINC00173-204ENST00000489452 FAM198AQ9UFP1 575 aa16.62■□□□□ 0.25
LINC00173-204ENST00000489452 PTCH2Q9Y6C5 1203 aa16.62■□□□□ 0.25
LINC00173-204ENST00000489452 PPATQ06203 517 aa16.61■□□□□ 0.25
LINC00173-204ENST00000489452 CCDC102BQ68D86 513 aa16.61■□□□□ 0.25
LINC00173-204ENST00000489452 COPRSQ9NQ92 184 aa16.61■□□□□ 0.25
LINC00173-204ENST00000489452 ABCF2Q9UG63 623 aa16.61■□□□□ 0.25
LINC00173-204ENST00000489452 BRCA2P51587 3418 aa16.6■□□□□ 0.25
LINC00173-204ENST00000489452 SRGAP3O43295 1099 aa16.6■□□□□ 0.25
LINC00173-204ENST00000489452 TLR2O60603 784 aa16.6■□□□□ 0.25
LINC00173-204ENST00000489452 TFCP2Q12800 502 aa16.6■□□□□ 0.25
LINC00173-204ENST00000489452 KIF22Q14807 665 aa16.6■□□□□ 0.25
LINC00173-204ENST00000489452 SLC9C1Q4G0N8 1177 aa16.6■□□□□ 0.25
LINC00173-204ENST00000489452 ARMC5Q96C12 935 aa16.6■□□□□ 0.25
LINC00173-204ENST00000489452 TMEM106CQ9BVX2 250 aa16.6■□□□□ 0.25
LINC00173-204ENST00000489452 AK9Q5TCS8 1911 aa16.59■□□□□ 0.25
LINC00173-204ENST00000489452 SEMA3EO15041 775 aa16.59■□□□□ 0.25
LINC00173-204ENST00000489452 RGS3P49796 1198 aa16.59■□□□□ 0.25
LINC00173-204ENST00000489452 NBPF11Q86T75 865 aa16.59■□□□□ 0.25
LINC00173-204ENST00000489452 DZIP1Q86YF9 867 aaKnown RBP16.59■□□□□ 0.25
LINC00173-204ENST00000489452 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
LINC00173-204ENST00000489452 NEUROD6Q96NK8 337 aa16.59■□□□□ 0.25
LINC00173-204ENST00000489452 CPA4Q9UI42 421 aa16.59■□□□□ 0.25
LINC00173-204ENST00000489452 ZNF112Q9UJU3 913 aa16.59■□□□□ 0.25
LINC00173-204ENST00000489452 PDHXO00330 501 aa16.58■□□□□ 0.24
LINC00173-204ENST00000489452 GNAI3P08754 354 aa16.58■□□□□ 0.24
LINC00173-204ENST00000489452 RASGRF1Q13972 1273 aa16.58■□□□□ 0.24
LINC00173-204ENST00000489452 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.24
LINC00173-204ENST00000489452 SH3TC2Q8TF17 1288 aa16.58■□□□□ 0.24
LINC00173-204ENST00000489452 FRAT1Q92837 279 aaPredicted RBP16.58■□□□□ 0.24
LINC00173-204ENST00000489452 XAGE2Q96GT9 111 aa16.58■□□□□ 0.24
LINC00173-204ENST00000489452 TNNQ9UQP3 1299 aa16.58■□□□□ 0.24
LINC00173-204ENST00000489452 SALL1Q9NSC2 1324 aa16.58■□□□□ 0.24
LINC00173-204ENST00000489452 RPAP1Q9BWH6 1393 aaPredicted RBP16.57■□□□□ 0.24
LINC00173-204ENST00000489452 A0A1B0GUL7 405 aa16.57■□□□□ 0.24
LINC00173-204ENST00000489452 SLURP2P0DP57 97 aa16.57■□□□□ 0.24
LINC00173-204ENST00000489452 LACTBP83111 547 aaPredicted RBP16.57■□□□□ 0.24
LINC00173-204ENST00000489452 ZGPATQ8N5A5 531 aaKnown RBP16.57■□□□□ 0.24
LINC00173-204ENST00000489452 ARHGAP45Q92619 1136 aa16.57■□□□□ 0.24
LINC00173-204ENST00000489452 CLUAP1Q96AJ1 413 aa16.57■□□□□ 0.24
LINC00173-204ENST00000489452 ZNF333Q96JL9 665 aa16.57■□□□□ 0.24
LINC00173-204ENST00000489452 ZCCHC17Q9NP64 241 aaKnown RBP16.57■□□□□ 0.24
LINC00173-204ENST00000489452 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
LINC00173-204ENST00000489452 CCER2I3L3R5 266 aa16.56■□□□□ 0.24
LINC00173-204ENST00000489452 BCAR3O75815 825 aa16.56■□□□□ 0.24
LINC00173-204ENST00000489452 PICALMQ13492 652 aa16.56■□□□□ 0.24
LINC00173-204ENST00000489452 GORABQ5T7V8 394 aa16.56■□□□□ 0.24
LINC00173-204ENST00000489452 SPTY2D1Q68D10 685 aaPredicted RBP16.56■□□□□ 0.24
LINC00173-204ENST00000489452 C17orf99Q6UX52 265 aa16.56■□□□□ 0.24
LINC00173-204ENST00000489452 ANKRD23Q86SG2 305 aa16.56■□□□□ 0.24
LINC00173-204ENST00000489452 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.56■□□□□ 0.24
LINC00173-204ENST00000489452 ZHX2Q9Y6X8 837 aa16.56■□□□□ 0.24
LINC00173-204ENST00000489452 LAMB1P07942 1786 aa16.56■□□□□ 0.24
LINC00173-204ENST00000489452 MYH13Q9UKX3 1938 aa16.55■□□□□ 0.24
LINC00173-204ENST00000489452 IPO8O15397 1037 aaKnown RBP16.55■□□□□ 0.24
LINC00173-204ENST00000489452 PSMC4P43686 418 aa16.55■□□□□ 0.24
LINC00173-204ENST00000489452 TBC1D9Q6ZT07 1266 aa16.55■□□□□ 0.24
LINC00173-204ENST00000489452 SH3BP5LQ7L8J4 393 aa16.55■□□□□ 0.24
LINC00173-204ENST00000489452 SLF2Q8IX21 1173 aa16.55■□□□□ 0.24
LINC00173-204ENST00000489452 PICK1Q9NRD5 415 aa16.55■□□□□ 0.24
LINC00173-204ENST00000489452 KCNH4Q9UQ05 1017 aa16.55■□□□□ 0.24
LINC00173-204ENST00000489452 DDTLA6NHG4 134 aaPredicted RBP16.54■□□□□ 0.24
LINC00173-204ENST00000489452 PHF20L1A8MW92 1017 aa16.54■□□□□ 0.24
LINC00173-204ENST00000489452 ENTPD3O75355 529 aa16.54■□□□□ 0.24
LINC00173-204ENST00000489452 FMNL1O95466 1100 aaPredicted RBP16.54■□□□□ 0.24
LINC00173-204ENST00000489452 GNAI2P04899 355 aa16.54■□□□□ 0.24
LINC00173-204ENST00000489452 CTGFP29279 349 aa16.54■□□□□ 0.24
LINC00173-204ENST00000489452 BTDP43251 543 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms