RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 SLF2Q8IX21 1173 aa16.61■□□□□ 0.25
LMO4-203ENST00000489303 RPAP2Q8IXW5 612 aaPredicted RBP16.61■□□□□ 0.25
LMO4-203ENST00000489303 SLC10A4Q96EP9 437 aa16.61■□□□□ 0.25
LMO4-203ENST00000489303 WNK4Q96J92 1243 aa16.61■□□□□ 0.25
LMO4-203ENST00000489303 PDS5AQ29RF7 1337 aaKnown RBP16.61■□□□□ 0.25
LMO4-203ENST00000489303 ARAP2Q8WZ64 1704 aa16.6■□□□□ 0.25
LMO4-203ENST00000489303 TCP10L2B9ZVM9 353 aa16.6■□□□□ 0.25
LMO4-203ENST00000489303 IGF2BP3O00425 579 aaKnown RBP eCLIP16.6■□□□□ 0.25
LMO4-203ENST00000489303 UQCRFS1P1P0C7P4 283 aa16.6■□□□□ 0.25
LMO4-203ENST00000489303 PRDX5P30044 214 aa16.6■□□□□ 0.25
LMO4-203ENST00000489303 RASGRF1Q13972 1273 aa16.6■□□□□ 0.25
LMO4-203ENST00000489303 CCDC158Q5M9N0 1113 aa16.6■□□□□ 0.25
LMO4-203ENST00000489303 DZIP1Q86YF9 867 aaKnown RBP16.6■□□□□ 0.25
LMO4-203ENST00000489303 ERC1Q8IUD2 1116 aa16.6■□□□□ 0.25
LMO4-203ENST00000489303 ABCF2Q9UG63 623 aa16.6■□□□□ 0.25
LMO4-203ENST00000489303 OTOFQ9HC10 1997 aa16.6■□□□□ 0.25
LMO4-203ENST00000489303 IREB2P48200 963 aaKnown RBP16.59■□□□□ 0.25
LMO4-203ENST00000489303 CACNB3P54284 484 aa16.59■□□□□ 0.25
LMO4-203ENST00000489303 TNNI3KQ59H18 835 aa16.59■□□□□ 0.25
LMO4-203ENST00000489303 CNKSR2Q8WXI2 1034 aa16.59■□□□□ 0.25
LMO4-203ENST00000489303 YTHDC1Q96MU7 727 aaKnown RBP16.59■□□□□ 0.25
LMO4-203ENST00000489303 TEPSINQ96N21 525 aa16.59■□□□□ 0.25
LMO4-203ENST00000489303 TMEM39BQ9GZU3 492 aa16.59■□□□□ 0.25
LMO4-203ENST00000489303 FPGT-TNNI3KV9GXZ4 949 aa16.59■□□□□ 0.25
LMO4-203ENST00000489303 CAP1Q01518 475 aa16.58■□□□□ 0.24
LMO4-203ENST00000489303 SREBF2Q12772 1141 aa16.58■□□□□ 0.24
LMO4-203ENST00000489303 TTC39AQ5SRH9 613 aa16.58■□□□□ 0.24
LMO4-203ENST00000489303 APOBEC3HQ6NTF7 200 aaKnown RBP16.58■□□□□ 0.24
LMO4-203ENST00000489303 ERICH6Q7L0X2 663 aa16.58■□□□□ 0.24
LMO4-203ENST00000489303 IFNL1Q8IU54 200 aa16.58■□□□□ 0.24
LMO4-203ENST00000489303 SPATA5Q8NB90 893 aa16.58■□□□□ 0.24
LMO4-203ENST00000489303 HOOK2Q96ED9 719 aa16.58■□□□□ 0.24
LMO4-203ENST00000489303 ZBTB40Q9NUA8 1239 aa16.58■□□□□ 0.24
LMO4-203ENST00000489303 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.58■□□□□ 0.24
LMO4-203ENST00000489303 UNCXA6NJT0 531 aa16.57■□□□□ 0.24
LMO4-203ENST00000489303 ARID4AP29374 1257 aaPredicted RBP16.57■□□□□ 0.24
LMO4-203ENST00000489303 DIXDC1Q155Q3 683 aa16.57■□□□□ 0.24
LMO4-203ENST00000489303 FKBP1CQ5VVH2 108 aa16.57■□□□□ 0.24
LMO4-203ENST00000489303 PTPN18Q99952 460 aa16.57■□□□□ 0.24
LMO4-203ENST00000489303 ELP3Q9H9T3 547 aa16.57■□□□□ 0.24
LMO4-203ENST00000489303 HMG20BQ9P0W2 317 aa16.57■□□□□ 0.24
LMO4-203ENST00000489303 DAGLAQ9Y4D2 1042 aa16.57■□□□□ 0.24
LMO4-203ENST00000489303 FKTNO75072 461 aa16.56■□□□□ 0.24
LMO4-203ENST00000489303 FAM83AQ86UY5 434 aa16.56■□□□□ 0.24
LMO4-203ENST00000489303 DBNDD2Q9BQY9 259 aa16.56■□□□□ 0.24
LMO4-203ENST00000489303 CFHR5Q9BXR6 569 aa16.56■□□□□ 0.24
LMO4-203ENST00000489303 EXOC6BQ9Y2D4 811 aa16.56■□□□□ 0.24
LMO4-203ENST00000489303 LAMB1P07942 1786 aa16.56■□□□□ 0.24
LMO4-203ENST00000489303 MANSC4A6NHS7 340 aaPredicted RBP16.55■□□□□ 0.24
LMO4-203ENST00000489303 GSTO1P78417 241 aa16.55■□□□□ 0.24
LMO4-203ENST00000489303 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.55■□□□□ 0.24
LMO4-203ENST00000489303 USP40Q9NVE5 1235 aa16.55■□□□□ 0.24
LMO4-203ENST00000489303 LDHCP07864 332 aa16.54■□□□□ 0.24
LMO4-203ENST00000489303 ZBTB48P10074 688 aaPredicted RBP16.54■□□□□ 0.24
LMO4-203ENST00000489303 NOM1Q5C9Z4 860 aaKnown RBP16.54■□□□□ 0.24
LMO4-203ENST00000489303 C20orf194Q5TEA3 1177 aa16.54■□□□□ 0.24
LMO4-203ENST00000489303 CDC42EP5Q6NZY7 148 aa16.54■□□□□ 0.24
LMO4-203ENST00000489303 ANKRD13AQ8IZ07 590 aa16.54■□□□□ 0.24
LMO4-203ENST00000489303 OPTNQ96CV9 577 aa16.54■□□□□ 0.24
LMO4-203ENST00000489303 RAI14Q9P0K7 980 aa16.54■□□□□ 0.24
LMO4-203ENST00000489303 LRP2BPQ9P2M1 347 aa16.54■□□□□ 0.24
LMO4-203ENST00000489303 MYH13Q9UKX3 1938 aa16.53■□□□□ 0.24
LMO4-203ENST00000489303 MCAMP43121 646 aa16.53■□□□□ 0.24
LMO4-203ENST00000489303 CRHR2Q13324 411 aa16.53■□□□□ 0.24
LMO4-203ENST00000489303 DCAF15Q66K64 600 aa16.53■□□□□ 0.24
LMO4-203ENST00000489303 FAM151AQ8WW52 585 aa16.53■□□□□ 0.24
LMO4-203ENST00000489303 FAM163AQ96GL9 167 aaPredicted RBP16.53■□□□□ 0.24
LMO4-203ENST00000489303 MS4A4AQ96JQ5 239 aa16.53■□□□□ 0.24
LMO4-203ENST00000489303 ZNF512BQ96KM6 892 aaPredicted RBP16.53■□□□□ 0.24
LMO4-203ENST00000489303 CCDC8Q9H0W5 538 aaPredicted RBP16.53■□□□□ 0.24
LMO4-203ENST00000489303 HTTP42858 3142 aa16.52■□□□□ 0.24
LMO4-203ENST00000489303 GAKO14976 1311 aa16.52■□□□□ 0.24
LMO4-203ENST00000489303 RAB11FIP3O75154 756 aa16.52■□□□□ 0.24
LMO4-203ENST00000489303 MECOMQ03112 1051 aa16.52■□□□□ 0.24
LMO4-203ENST00000489303 VGLL4Q14135 290 aa16.52■□□□□ 0.24
LMO4-203ENST00000489303 FBXO46Q6PJ61 603 aaPredicted RBP16.52■□□□□ 0.24
LMO4-203ENST00000489303 PI16Q6UXB8 463 aa16.52■□□□□ 0.24
LMO4-203ENST00000489303 TBC1D9Q6ZT07 1266 aa16.52■□□□□ 0.24
LMO4-203ENST00000489303 AACSQ86V21 672 aa16.52■□□□□ 0.24
LMO4-203ENST00000489303 CLASRPQ8N2M8 674 aaKnown RBP16.52■□□□□ 0.24
LMO4-203ENST00000489303 RHPN1Q8TCX5 695 aa16.52■□□□□ 0.24
LMO4-203ENST00000489303 EAF2Q96CJ1 260 aaPredicted RBP16.52■□□□□ 0.24
LMO4-203ENST00000489303 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
LMO4-203ENST00000489303 NOL10Q9BSC4 688 aaKnown RBP16.52■□□□□ 0.24
LMO4-203ENST00000489303 DBNLQ9UJU6 430 aaKnown RBP16.52■□□□□ 0.24
LMO4-203ENST00000489303 TRIM17Q9Y577 477 aa16.52■□□□□ 0.24
LMO4-203ENST00000489303 MROH7-TTC4A0A0A0MT08 1334 aa16.51■□□□□ 0.23
LMO4-203ENST00000489303 APBB1O00213 710 aa16.51■□□□□ 0.23
LMO4-203ENST00000489303 IGSF3O75054 1194 aa16.51■□□□□ 0.23
LMO4-203ENST00000489303 BTDP43251 543 aa16.51■□□□□ 0.23
LMO4-203ENST00000489303 INHBEP58166 350 aa16.51■□□□□ 0.23
LMO4-203ENST00000489303 PKN2Q16513 984 aaKnown RBP16.51■□□□□ 0.23
LMO4-203ENST00000489303 OTOP1Q7RTM1 612 aa16.51■□□□□ 0.23
LMO4-203ENST00000489303 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.51■□□□□ 0.23
LMO4-203ENST00000489303 CD99L2Q8TCZ2 262 aa16.51■□□□□ 0.23
LMO4-203ENST00000489303 SNRKQ9NRH2 765 aa16.51■□□□□ 0.23
LMO4-203ENST00000489303 CSADQ9Y600 493 aa16.51■□□□□ 0.23
LMO4-203ENST00000489303 RPAP1Q9BWH6 1393 aaPredicted RBP16.51■□□□□ 0.23
LMO4-203ENST00000489303 TESPA1A2RU30 521 aaPredicted RBP16.5■□□□□ 0.23
LMO4-203ENST00000489303 ALDH1A1P00352 501 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms