RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 COL13A1Q5TAT6 717 aaPredicted RBP29.43■■■□□ 2.3
PTPN18-213ENST00000489215 ANKRD13AQ8IZ07 590 aa29.43■■■□□ 2.3
PTPN18-213ENST00000489215 DBNDD2Q9BQY9 259 aa29.43■■■□□ 2.3
PTPN18-213ENST00000489215 TMEM39BQ9GZU3 492 aa29.43■■■□□ 2.3
PTPN18-213ENST00000489215 SAGE1Q9NXZ1 904 aa29.43■■■□□ 2.3
PTPN18-213ENST00000489215 RAB11FIP3O75154 756 aa29.42■■■□□ 2.3
PTPN18-213ENST00000489215 USP2O75604 605 aaPredicted RBP29.42■■■□□ 2.3
PTPN18-213ENST00000489215 MCAMP43121 646 aa29.42■■■□□ 2.3
PTPN18-213ENST00000489215 CDC42EP5Q6NZY7 148 aa29.42■■■□□ 2.3
PTPN18-213ENST00000489215 ZIC5Q96T25 663 aa29.42■■■□□ 2.3
PTPN18-213ENST00000489215 USP40Q9NVE5 1235 aa29.42■■■□□ 2.3
PTPN18-213ENST00000489215 GAKO14976 1311 aa29.42■■■□□ 2.3
PTPN18-213ENST00000489215 AKAP11Q9UKA4 1901 aa29.41■■■□□ 2.3
PTPN18-213ENST00000489215 RPAP1Q9BWH6 1393 aaPredicted RBP29.41■■■□□ 2.3
PTPN18-213ENST00000489215 SSC5DA1L4H1 1573 aa29.41■■■□□ 2.3
PTPN18-213ENST00000489215 C20orf194Q5TEA3 1177 aa29.41■■■□□ 2.3
PTPN18-213ENST00000489215 FAM151AQ8WW52 585 aa29.41■■■□□ 2.3
PTPN18-213ENST00000489215 KIF1BPQ96EK5 621 aa29.41■■■□□ 2.3
PTPN18-213ENST00000489215 CSRNP1Q96S65 589 aa29.41■■■□□ 2.3
PTPN18-213ENST00000489215 LRP2BPQ9P2M1 347 aa29.41■■■□□ 2.3
PTPN18-213ENST00000489215 MAP4K4O95819 1239 aaPredicted RBP29.4■■■□□ 2.3
PTPN18-213ENST00000489215 CACNB3P54284 484 aa29.4■■■□□ 2.3
PTPN18-213ENST00000489215 CLASRPQ8N2M8 674 aaKnown RBP29.4■■■□□ 2.3
PTPN18-213ENST00000489215 RHPN1Q8TCX5 695 aa29.4■■■□□ 2.3
PTPN18-213ENST00000489215 EAF2Q96CJ1 260 aaPredicted RBP29.4■■■□□ 2.3
PTPN18-213ENST00000489215 YTHDC1Q96MU7 727 aaKnown RBP29.4■■■□□ 2.3
PTPN18-213ENST00000489215 ZBTB48P10074 688 aaPredicted RBP29.39■■■□□ 2.3
PTPN18-213ENST00000489215 INHBEP58166 350 aa29.39■■■□□ 2.3
PTPN18-213ENST00000489215 MECOMQ03112 1051 aa29.39■■■□□ 2.3
PTPN18-213ENST00000489215 SREBF2Q12772 1141 aa29.39■■■□□ 2.3
PTPN18-213ENST00000489215 DCAF15Q66K64 600 aa29.39■■■□□ 2.3
PTPN18-213ENST00000489215 DBNLQ9UJU6 430 aaKnown RBP29.39■■■□□ 2.3
PTPN18-213ENST00000489215 CCDC8Q9H0W5 538 aaPredicted RBP29.38■■■□□ 2.29
PTPN18-213ENST00000489215 RAI14Q9P0K7 980 aa29.38■■■□□ 2.29
PTPN18-213ENST00000489215 MROH7-TTC4A0A0A0MT08 1334 aa29.38■■■□□ 2.29
PTPN18-213ENST00000489215 TM4SF4P48230 202 aa29.37■■■□□ 2.29
PTPN18-213ENST00000489215 SPRYD7Q5W111 196 aa29.37■■■□□ 2.29
PTPN18-213ENST00000489215 AACSQ86V21 672 aa29.37■■■□□ 2.29
PTPN18-213ENST00000489215 SIRT2Q8IXJ6 389 aa29.37■■■□□ 2.29
PTPN18-213ENST00000489215 IDI2Q9BXS1 227 aa29.37■■■□□ 2.29
PTPN18-213ENST00000489215 GPR75-ASB3A0A0A6YYF3 556 aa29.36■■■□□ 2.29
PTPN18-213ENST00000489215 PI16Q6UXB8 463 aa29.36■■■□□ 2.29
PTPN18-213ENST00000489215 TNS4Q8IZW8 715 aa29.36■■■□□ 2.29
PTPN18-213ENST00000489215 NSUN4Q96CB9 384 aaKnown RBP29.36■■■□□ 2.29
PTPN18-213ENST00000489215 FZD1Q9UP38 647 aa29.36■■■□□ 2.29
PTPN18-213ENST00000489215 ENTPD3O75355 529 aa29.35■■■□□ 2.29
PTPN18-213ENST00000489215 MAP3K9P80192 1104 aa29.35■■■□□ 2.29
PTPN18-213ENST00000489215 TBC1D9Q6ZT07 1266 aa29.35■■■□□ 2.29
PTPN18-213ENST00000489215 NOL10Q9BSC4 688 aaKnown RBP29.35■■■□□ 2.29
PTPN18-213ENST00000489215 CSADQ9Y600 493 aa29.35■■■□□ 2.29
PTPN18-213ENST00000489215 AK9Q5TCS8 1911 aa29.34■■■□□ 2.29
PTPN18-213ENST00000489215 MANSC4A6NHS7 340 aaPredicted RBP29.34■■■□□ 2.29
PTPN18-213ENST00000489215 BTDP43251 543 aa29.34■■■□□ 2.29
PTPN18-213ENST00000489215 TMED8Q6PL24 325 aaPredicted RBP29.34■■■□□ 2.29
PTPN18-213ENST00000489215 RNF186Q9NXI6 227 aa29.34■■■□□ 2.29
PTPN18-213ENST00000489215 TCP10Q12799 353 aa29.33■■■□□ 2.29
PTPN18-213ENST00000489215 WNK4Q96J92 1243 aa29.33■■■□□ 2.29
PTPN18-213ENST00000489215 SNRKQ9NRH2 765 aa29.33■■■□□ 2.29
PTPN18-213ENST00000489215 NPM3O75607 178 aaKnown RBP29.32■■■□□ 2.28
PTPN18-213ENST00000489215 TRPA1O75762 1119 aa29.32■■■□□ 2.28
PTPN18-213ENST00000489215 IFIT2P09913 472 aaKnown RBP29.32■■■□□ 2.28
PTPN18-213ENST00000489215 RRP1P56182 461 aaKnown RBP29.32■■■□□ 2.28
PTPN18-213ENST00000489215 IFFO2Q5TF58 517 aa29.32■■■□□ 2.28
PTPN18-213ENST00000489215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.32■■■□□ 2.28
PTPN18-213ENST00000489215 CLMNQ96JQ2 1002 aa29.32■■■□□ 2.28
PTPN18-213ENST00000489215 ZNF341Q9BYN7 854 aa29.32■■■□□ 2.28
PTPN18-213ENST00000489215 IL1RAPL2Q9NP60 686 aa29.32■■■□□ 2.28
PTPN18-213ENST00000489215 BAG3O95817 575 aa29.31■■■□□ 2.28
PTPN18-213ENST00000489215 ALDH1A1P00352 501 aa29.31■■■□□ 2.28
PTPN18-213ENST00000489215 CYP2E1P05181 493 aaPredicted RBP29.31■■■□□ 2.28
PTPN18-213ENST00000489215 NFIAQ12857 509 aa29.31■■■□□ 2.28
PTPN18-213ENST00000489215 NAA16Q6N069 864 aaPredicted RBP29.31■■■□□ 2.28
PTPN18-213ENST00000489215 CDAN1Q8IWY9 1227 aa29.31■■■□□ 2.28
PTPN18-213ENST00000489215 TLR7Q9NYK1 1049 aaKnown RBP29.31■■■□□ 2.28
PTPN18-213ENST00000489215 FAM198AQ9UFP1 575 aa29.31■■■□□ 2.28
PTPN18-213ENST00000489215 PLCG2P16885 1265 aa29.3■■■□□ 2.28
PTPN18-213ENST00000489215 ZAP70P43403 619 aa29.3■■■□□ 2.28
PTPN18-213ENST00000489215 APBB1O00213 710 aa29.29■■■□□ 2.28
PTPN18-213ENST00000489215 RGS3P49796 1198 aa29.29■■■□□ 2.28
PTPN18-213ENST00000489215 MKRN3Q13064 507 aaKnown RBP29.29■■■□□ 2.28
PTPN18-213ENST00000489215 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.29■■■□□ 2.28
PTPN18-213ENST00000489215 TSKSQ9UJT2 592 aa29.29■■■□□ 2.28
PTPN18-213ENST00000489215 TTF1Q15361 905 aaPredicted RBP29.28■■■□□ 2.28
PTPN18-213ENST00000489215 OTUD7BQ6GQQ9 843 aa29.28■■■□□ 2.28
PTPN18-213ENST00000489215 ZNF384Q8TF68 577 aa29.28■■■□□ 2.28
PTPN18-213ENST00000489215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.28■■■□□ 2.28
PTPN18-213ENST00000489215 WRNIP1Q96S55 665 aa29.28■■■□□ 2.28
PTPN18-213ENST00000489215 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.28■■■□□ 2.28
PTPN18-213ENST00000489215 VGLL4Q14135 290 aa29.27■■■□□ 2.28
PTPN18-213ENST00000489215 CERS3Q8IU89 383 aa29.27■■■□□ 2.28
PTPN18-213ENST00000489215 ZSCAN29Q8IWY8 852 aaPredicted RBP29.27■■■□□ 2.28
PTPN18-213ENST00000489215 LRRCC1Q9C099 1032 aa29.27■■■□□ 2.28
PTPN18-213ENST00000489215 ELP3Q9H9T3 547 aa29.27■■■□□ 2.28
PTPN18-213ENST00000489215 WDHD1O75717 1129 aaPredicted RBP29.26■■■□□ 2.27
PTPN18-213ENST00000489215 RHBDL3P58872 404 aa29.26■■■□□ 2.27
PTPN18-213ENST00000489215 OPTNQ96CV9 577 aa29.26■■■□□ 2.27
PTPN18-213ENST00000489215 OTOFQ9HC10 1997 aa29.26■■■□□ 2.27
PTPN18-213ENST00000489215 LAMB1P07942 1786 aa29.26■■■□□ 2.27
PTPN18-213ENST00000489215 MAST2Q6P0Q8 1798 aa29.26■■■□□ 2.27
PTPN18-213ENST00000489215 MAP3K12Q12852 859 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms