RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 CDKL5O76039 1030 aa12.66□□□□□ -0.38
NEB-215ENST00000489048 PNMA6AP0CW24 399 aaPredicted RBP12.66□□□□□ -0.38
NEB-215ENST00000489048 HAND2P61296 217 aa12.66□□□□□ -0.38
NEB-215ENST00000489048 DPF2Q92785 391 aa12.66□□□□□ -0.38
NEB-215ENST00000489048 PUS3Q9BZE2 481 aaKnown RBP12.66□□□□□ -0.38
NEB-215ENST00000489048 ECM29Q5VYK3 1845 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 ZNF213O14771 459 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 ARHGAP6O43182 974 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 ZSCAN12O43309 604 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 TBX2Q13207 712 aaPredicted RBP12.65□□□□□ -0.38
NEB-215ENST00000489048 VPS37DQ86XT2 251 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 XAGE2Q96GT9 111 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 BCL11BQ9C0K0 894 aaPredicted RBP12.65□□□□□ -0.38
NEB-215ENST00000489048 GJB4Q9NTQ9 266 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 GOLGA6L9A6NEM1 432 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 SH2B2O14492 632 aaPredicted RBP12.65□□□□□ -0.38
NEB-215ENST00000489048 FANCGO15287 622 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 CUTAO60888 179 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 PLA2G4AP47712 749 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 FKBP4Q02790 459 aaKnown RBP eCLIP12.65□□□□□ -0.38
NEB-215ENST00000489048 WASHC4Q2M389 1173 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 HOMER1Q86YM7 354 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 MPHOSPH8Q99549 860 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 ALG1Q9BT22 464 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 PUS7LQ9H0K6 701 aaKnown RBP12.65□□□□□ -0.38
NEB-215ENST00000489048 ANGEL1Q9UNK9 670 aaKnown RBP12.65□□□□□ -0.38
NEB-215ENST00000489048 PARP3Q9Y6F1 533 aa12.65□□□□□ -0.38
NEB-215ENST00000489048 GPAA1O43292 621 aa12.64□□□□□ -0.39
NEB-215ENST00000489048 KRT40Q6A162 431 aa12.64□□□□□ -0.39
NEB-215ENST00000489048 UBXN4Q92575 508 aa12.64□□□□□ -0.39
NEB-215ENST00000489048 NOL10Q9BSC4 688 aaKnown RBP12.64□□□□□ -0.39
NEB-215ENST00000489048 ISCA1Q9BUE6 129 aa12.64□□□□□ -0.39
NEB-215ENST00000489048 PLA2G12BQ9BX93 195 aa12.64□□□□□ -0.39
NEB-215ENST00000489048 UBXN6Q9BZV1 441 aa12.64□□□□□ -0.39
NEB-215ENST00000489048 NBPF3Q9H094 633 aa12.64□□□□□ -0.39
NEB-215ENST00000489048 C19orf44Q9H6X5 657 aa12.64□□□□□ -0.39
NEB-215ENST00000489048 VWA3AA6NCI4 1184 aa12.64□□□□□ -0.39
NEB-215ENST00000489048 SERPINC1P01008 464 aa12.64□□□□□ -0.39
NEB-215ENST00000489048 MARCKSP29966 332 aaPredicted RBP12.64□□□□□ -0.39
NEB-215ENST00000489048 ADORA1P30542 326 aa12.64□□□□□ -0.39
NEB-215ENST00000489048 CYP2C19P33261 490 aa12.64□□□□□ -0.39
NEB-215ENST00000489048 METTL16Q86W50 562 aaKnown RBP12.64□□□□□ -0.39
NEB-215ENST00000489048 NID2Q14112 1375 aa12.63□□□□□ -0.39
NEB-215ENST00000489048 STK36Q9NRP7 1315 aa12.63□□□□□ -0.39
NEB-215ENST00000489048 TOP1P11387 765 aaKnown RBP12.63□□□□□ -0.39
NEB-215ENST00000489048 METAP2P50579 478 aaKnown RBP eCLIP12.63□□□□□ -0.39
NEB-215ENST00000489048 OLFM4Q6UX06 510 aa12.63□□□□□ -0.39
NEB-215ENST00000489048 KRBA2Q6ZNG9 492 aa12.63□□□□□ -0.39
NEB-215ENST00000489048 ZNF512BQ96KM6 892 aaPredicted RBP12.63□□□□□ -0.39
NEB-215ENST00000489048 ST7Q9NRC1 585 aa12.63□□□□□ -0.39
NEB-215ENST00000489048 INTS13Q9NVM9 706 aa12.63□□□□□ -0.39
NEB-215ENST00000489048 ZAP70P43403 619 aa12.63□□□□□ -0.39
NEB-215ENST00000489048 MDM2Q00987 491 aaPredicted RBP12.63□□□□□ -0.39
NEB-215ENST00000489048 PNOCQ13519 176 aa12.63□□□□□ -0.39
NEB-215ENST00000489048 SCARF1Q14162 830 aa12.63□□□□□ -0.39
NEB-215ENST00000489048 CFAP100Q494V2 611 aa12.63□□□□□ -0.39
NEB-215ENST00000489048 TMCO3Q6UWJ1 677 aa12.63□□□□□ -0.39
NEB-215ENST00000489048 TNS2Q63HR2 1409 aa12.63□□□□□ -0.39
NEB-215ENST00000489048 LRP6O75581 1613 aa12.63□□□□□ -0.39
NEB-215ENST00000489048 NPHP1O15259 732 aa12.62□□□□□ -0.39
NEB-215ENST00000489048 NTRK3Q16288 839 aa12.62□□□□□ -0.39
NEB-215ENST00000489048 CCDC57Q2TAC2 916 aa12.62□□□□□ -0.39
NEB-215ENST00000489048 NT5DC1Q5TFE4 455 aa12.62□□□□□ -0.39
NEB-215ENST00000489048 CCDC102BQ68D86 513 aa12.62□□□□□ -0.39
NEB-215ENST00000489048 CPLX2Q6PUV4 134 aaKnown RBP12.62□□□□□ -0.39
NEB-215ENST00000489048 MNS1Q8NEH6 495 aa12.62□□□□□ -0.39
NEB-215ENST00000489048 SYTL4Q96C24 671 aaPredicted RBP12.62□□□□□ -0.39
NEB-215ENST00000489048 TMEM87BQ96K49 555 aa12.62□□□□□ -0.39
NEB-215ENST00000489048 UTP14AQ9BVJ6 771 aaKnown RBP12.62□□□□□ -0.39
NEB-215ENST00000489048 PPP2R2CQ9Y2T4 447 aa12.62□□□□□ -0.39
NEB-215ENST00000489048 RIC1Q4ADV7 1423 aa12.62□□□□□ -0.39
NEB-215ENST00000489048 ADD2P35612 726 aa12.62□□□□□ -0.39
NEB-215ENST00000489048 TRIM28Q13263 835 aaKnown RBP12.62□□□□□ -0.39
NEB-215ENST00000489048 APOA5Q6Q788 366 aa12.62□□□□□ -0.39
NEB-215ENST00000489048 SGMS1Q86VZ5 419 aa12.62□□□□□ -0.39
NEB-215ENST00000489048 FOXP4Q8IVH2 680 aaPredicted RBP12.62□□□□□ -0.39
NEB-215ENST00000489048 CALCOCO1Q9P1Z2 691 aa12.62□□□□□ -0.39
NEB-215ENST00000489048 TMEM232C9JQI7 657 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 STX10O60499 249 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 CSF1RP07333 972 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 ZNF18P17022 549 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 MAP3K9P80192 1104 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 TRDNQ13061 729 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 GORABQ5T7V8 394 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 CYB5R4Q7L1T6 521 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 RAB11FIP4Q86YS3 637 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 TBC1D10CQ8IV04 446 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 AIFM3Q96NN9 605 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.61□□□□□ -0.39
NEB-215ENST00000489048 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.61□□□□□ -0.39
NEB-215ENST00000489048 FANCLQ9NW38 375 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 AKAP11Q9UKA4 1901 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 ERVV-2B6SEH9 535 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 CSB-PGBD3P0DP91 1061 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 CDC27P30260 824 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 LONRF3Q496Y0 759 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 ISM2Q6H9L7 571 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 KCNH3Q9ULD8 1083 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 PCDHA5Q9Y5H7 936 aa12.61□□□□□ -0.39
NEB-215ENST00000489048 URI1O94763 535 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms