RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 FAM107BQ9H098 131 aa18.49■□□□□ 0.55
MCF2L-229ENST00000488765 INTS13Q9NVM9 706 aa18.49■□□□□ 0.55
MCF2L-229ENST00000488765 SYF2O95926 243 aaKnown RBP18.49■□□□□ 0.55
MCF2L-229ENST00000488765 GGCXP38435 758 aa18.49■□□□□ 0.55
MCF2L-229ENST00000488765 CAPZA3Q96KX2 299 aa18.49■□□□□ 0.55
MCF2L-229ENST00000488765 EIF5P55010 431 aaKnown RBP18.48■□□□□ 0.55
MCF2L-229ENST00000488765 NEK1Q96PY6 1258 aa18.48■□□□□ 0.55
MCF2L-229ENST00000488765 MED4Q9NPJ6 270 aa18.48■□□□□ 0.55
MCF2L-229ENST00000488765 VSTM4Q8IW00 320 aa18.48■□□□□ 0.55
MCF2L-229ENST00000488765 GPHNQ9NQX3 736 aaPredicted RBP18.48■□□□□ 0.55
MCF2L-229ENST00000488765 NLRP12P59046 1061 aa18.47■□□□□ 0.55
MCF2L-229ENST00000488765 SLC35F6Q8N357 371 aa18.47■□□□□ 0.55
MCF2L-229ENST00000488765 FOXN1O15353 648 aa18.47■□□□□ 0.55
MCF2L-229ENST00000488765 TFR2Q9UP52 801 aa18.47■□□□□ 0.55
MCF2L-229ENST00000488765 ZEB2O60315 1214 aa18.47■□□□□ 0.55
MCF2L-229ENST00000488765 CDC27P30260 824 aa18.47■□□□□ 0.55
MCF2L-229ENST00000488765 AIMP1Q12904 312 aaKnown RBP18.47■□□□□ 0.55
MCF2L-229ENST00000488765 KIF13AQ9H1H9 1805 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 USP32Q8NFA0 1604 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 IRF6O14896 467 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 SRGAP2O75044 1071 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 CTDNEP1O95476 244 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 HSPA2P54652 639 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 SETQ01105 290 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-229ENST00000488765 MAP9Q49MG5 647 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 HDGFL1Q5TGJ6 251 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 CTCFLQ8NI51 663 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-229ENST00000488765 ZNF396Q96N95 335 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-229ENST00000488765 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-229ENST00000488765 NRXN3Q9Y4C0 1643 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 RPS6KA5O75582 802 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 TUBB4AP04350 444 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 RPSAP08865 295 aaKnown RBP18.46■□□□□ 0.55
MCF2L-229ENST00000488765 PDE4BQ07343 736 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 RNF187Q5TA31 235 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-229ENST00000488765 TC2NQ8N9U0 490 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 ACRBPQ8NEB7 543 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 HDAC6Q9UBN7 1215 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 FLT4P35916 1363 aa18.46■□□□□ 0.55
MCF2L-229ENST00000488765 CCDC196A0A1B0GTZ2 297 aa18.45■□□□□ 0.54
MCF2L-229ENST00000488765 RDXP35241 583 aaKnown RBP18.45■□□□□ 0.54
MCF2L-229ENST00000488765 CDC23Q9UJX2 597 aa18.45■□□□□ 0.54
MCF2L-229ENST00000488765 PIP4K2AP48426 406 aaPredicted RBP18.45■□□□□ 0.54
MCF2L-229ENST00000488765 SF3A3Q12874 501 aaKnown RBP eCLIP18.45■□□□□ 0.546e-9■■■■■ 82.3
MCF2L-229ENST00000488765 DLC1Q96QB1 1528 aa18.45■□□□□ 0.54
MCF2L-229ENST00000488765 CDK12Q9NYV4 1490 aaPredicted RBP18.45■□□□□ 0.54
MCF2L-229ENST00000488765 CTAGE15A4D2H0 777 aa18.45■□□□□ 0.54
MCF2L-229ENST00000488765 KIF5CO60282 957 aa18.45■□□□□ 0.54
MCF2L-229ENST00000488765 CTAGE8P0CG41 777 aa18.45■□□□□ 0.54
MCF2L-229ENST00000488765 IRAK1P51617 712 aa18.45■□□□□ 0.54
MCF2L-229ENST00000488765 E2F5Q15329 346 aa18.45■□□□□ 0.54
MCF2L-229ENST00000488765 ZNF530Q6P9A1 599 aaPredicted RBP18.45■□□□□ 0.54
MCF2L-229ENST00000488765 CTAGE6Q86UF2 777 aa18.45■□□□□ 0.54
MCF2L-229ENST00000488765 CTAGE4Q8IX94 777 aa18.45■□□□□ 0.54
MCF2L-229ENST00000488765 NSUN7Q8NE18 718 aaKnown RBP18.45■□□□□ 0.54
MCF2L-229ENST00000488765 ACBD3Q9H3P7 528 aa18.45■□□□□ 0.54
MCF2L-229ENST00000488765 CSB-PGBD3P0DP91 1061 aa18.44■□□□□ 0.54
MCF2L-229ENST00000488765 PFKFB1P16118 471 aa18.44■□□□□ 0.54
MCF2L-229ENST00000488765 ATP1A2P50993 1020 aa18.44■□□□□ 0.54
MCF2L-229ENST00000488765 MYL5Q02045 173 aa18.44■□□□□ 0.54
MCF2L-229ENST00000488765 CHRNA2Q15822 529 aa18.44■□□□□ 0.54
MCF2L-229ENST00000488765 RAD9BQ6WBX8 426 aa18.44■□□□□ 0.54
MCF2L-229ENST00000488765 GNGT1P63211 74 aa18.44■□□□□ 0.54
MCF2L-229ENST00000488765 EVI5LQ96CN4 794 aa18.44■□□□□ 0.54
MCF2L-229ENST00000488765 PI4KAP2A4QPH2 592 aa18.43■□□□□ 0.54
MCF2L-229ENST00000488765 ATP2C2O75185 946 aa18.43■□□□□ 0.54
MCF2L-229ENST00000488765 CPP00450 1065 aa18.43■□□□□ 0.54
MCF2L-229ENST00000488765 ADALQ6DHV7 355 aa18.43■□□□□ 0.54
MCF2L-229ENST00000488765 PI4KAP1Q8N8J0 262 aa18.43■□□□□ 0.54
MCF2L-229ENST00000488765 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.43■□□□□ 0.54
MCF2L-229ENST00000488765 NLRP2Q9NX02 1062 aa18.43■□□□□ 0.54
MCF2L-229ENST00000488765 KCTD16Q68DU8 428 aa18.43■□□□□ 0.54
MCF2L-229ENST00000488765 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.43■□□□□ 0.54
MCF2L-229ENST00000488765 TRIM10Q9UDY6 481 aa18.43■□□□□ 0.54
MCF2L-229ENST00000488765 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-229ENST00000488765 SPTLC2O15270 562 aa18.42■□□□□ 0.54
MCF2L-229ENST00000488765 CCDC175P0C221 793 aa18.42■□□□□ 0.54
MCF2L-229ENST00000488765 PEX19P40855 299 aa18.42■□□□□ 0.54
MCF2L-229ENST00000488765 KCNJ6P48051 423 aa18.42■□□□□ 0.54
MCF2L-229ENST00000488765 KLHL10Q6JEL2 608 aa18.42■□□□□ 0.54
MCF2L-229ENST00000488765 EAF2Q96CJ1 260 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-229ENST00000488765 AOX1Q06278 1338 aa18.42■□□□□ 0.54
MCF2L-229ENST00000488765 PRAMEF22A3QJZ6 481 aa18.42■□□□□ 0.54
MCF2L-229ENST00000488765 TEX33O43247 280 aa18.42■□□□□ 0.54
MCF2L-229ENST00000488765 EPB41L2O43491 1005 aaKnown RBP18.42■□□□□ 0.54
MCF2L-229ENST00000488765 KIF1CO43896 1103 aaKnown RBP18.42■□□□□ 0.54
MCF2L-229ENST00000488765 GIGYF1O75420 1035 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-229ENST00000488765 SAMSN1Q9NSI8 373 aaKnown RBP18.42■□□□□ 0.54
MCF2L-229ENST00000488765 GNL3LQ9NVN8 582 aaKnown RBP18.42■□□□□ 0.54
MCF2L-229ENST00000488765 GOLGA6CA6NDK9 693 aa18.42■□□□□ 0.54
MCF2L-229ENST00000488765 GOLGA6DP0CG33 693 aa18.42■□□□□ 0.54
MCF2L-229ENST00000488765 NF2P35240 595 aa18.42■□□□□ 0.54
MCF2L-229ENST00000488765 STX17P56962 302 aa18.42■□□□□ 0.54
MCF2L-229ENST00000488765 GOLGA6AQ9NYA3 693 aa18.42■□□□□ 0.54
MCF2L-229ENST00000488765 CDC42BPGQ6DT37 1551 aa18.41■□□□□ 0.54
MCF2L-229ENST00000488765 CTAGE9A4FU28 777 aa18.41■□□□□ 0.54
MCF2L-229ENST00000488765 CYP21A2P08686 494 aa18.41■□□□□ 0.54
MCF2L-229ENST00000488765 MYBL2P10244 700 aa18.41■□□□□ 0.54
MCF2L-229ENST00000488765 OTUD6BQ8N6M0 293 aa18.41■□□□□ 0.54
MCF2L-229ENST00000488765 CEP112Q8N8E3 955 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms