RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 TBC1D32Q96NH3 1257 aa9.07□□□□□ -0.96
APOBEC3A-203ENST00000488758 SEC62Q99442 399 aaKnown RBP9.07□□□□□ -0.96
APOBEC3A-203ENST00000488758 IL25Q9H293 177 aa9.07□□□□□ -0.96
APOBEC3A-203ENST00000488758 DBNDD1Q9H9R9 158 aa9.07□□□□□ -0.96
APOBEC3A-203ENST00000488758 CCDC171Q6TFL3 1326 aa9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 FAM205AQ6ZU69 1335 aa9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 LTBP1Q14766 1721 aa9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 MYH13Q9UKX3 1938 aa9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 ECE2O60344 883 aa9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 LDHCP07864 332 aa9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 ANP32AP39687 249 aaKnown RBP9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 RBM25P49756 843 aaKnown RBP9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 GSTO1P78417 241 aa9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 CCDC129Q6ZRS4 1044 aa9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 SLF2Q8IX21 1173 aa9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 AIDAQ96BJ3 306 aa9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 LSG1Q9H089 658 aaKnown RBP9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 PUS7LQ9H0K6 701 aaKnown RBP9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 TAOK3Q9H2K8 898 aa9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 ZNF277Q9NRM2 450 aaPredicted RBP9.06□□□□□ -0.96
APOBEC3A-203ENST00000488758 MAST3O60307 1309 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 DUOX1Q9NRD9 1551 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 COL1A1P02452 1464 aaPredicted RBP9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 MAGEB6P1A0A0J9YX57 407 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 TCRBV5S4A2TA0A5A2 114 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 M0R2C6 588 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 YBX3P16989 372 aaKnown RBP eCLIP9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 PRDX5P30044 214 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 IARSP41252 1262 aaKnown RBP9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 MECOMQ03112 1051 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 PTH1RQ03431 593 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 MFSD14BQ5SR56 506 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 ZNF589Q86UQ0 364 aaPredicted RBP9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 NIM1KQ8IY84 436 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 JDP2Q8WYK2 163 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 MAP4K1Q92918 833 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 NOL10Q9BSC4 688 aaKnown RBP9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 MYH7P12883 1935 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 KIAA1551Q9HCM1 1747 aa9.05□□□□□ -0.96
APOBEC3A-203ENST00000488758 USP17L3A6NCW0 530 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 USP17L4A6NCW7 530 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 GPAA1O43292 621 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 APPP05067 770 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 GNAT2P19087 354 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 HSPA4P34932 840 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 FKBP1AP62942 108 aaKnown RBP9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 STRIP1Q5VSL9 837 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 RNF20Q5VTR2 975 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 ARHGAP27Q6ZUM4 889 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 USP17L1Q7RTZ2 530 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 NSUN4Q96CB9 384 aaKnown RBP9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 STRBPQ96SI9 672 aaKnown RBP9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 DSCC1Q9BVC3 393 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 CTNNA3Q9UI47 895 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 SUGT1Q9Y2Z0 365 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 RBM8AQ9Y5S9 174 aaKnown RBP9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 MYO5AQ9Y4I1 1855 aaKnown RBP9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 SNED1Q8TER0 1413 aa9.04□□□□□ -0.96
APOBEC3A-203ENST00000488758 PATL2C9JE40 543 aaKnown RBP9.03□□□□□ -0.96
APOBEC3A-203ENST00000488758 MBD4O95243 580 aa9.03□□□□□ -0.96
APOBEC3A-203ENST00000488758 BAG3O95817 575 aa9.03□□□□□ -0.96
APOBEC3A-203ENST00000488758 HSPD1P10809 573 aaKnown RBP9.03□□□□□ -0.96
APOBEC3A-203ENST00000488758 ZKSCAN1P17029 563 aaPredicted RBP9.03□□□□□ -0.96
APOBEC3A-203ENST00000488758 ANAPC15P60006 121 aa9.03□□□□□ -0.96
APOBEC3A-203ENST00000488758 MIGA1Q8NAN2 632 aa9.03□□□□□ -0.96
APOBEC3A-203ENST00000488758 ZNF526Q8TF50 670 aaPredicted RBP9.03□□□□□ -0.96
APOBEC3A-203ENST00000488758 DDRGK1Q96HY6 314 aa9.03□□□□□ -0.96
APOBEC3A-203ENST00000488758 ARMT1Q9H993 441 aa9.03□□□□□ -0.96
APOBEC3A-203ENST00000488758 ZNRF3Q9ULT6 936 aa9.03□□□□□ -0.96
APOBEC3A-203ENST00000488758 DOCK2Q92608 1830 aa9.03□□□□□ -0.96
APOBEC3A-203ENST00000488758 LTBP3Q9NS15 1303 aa9.03□□□□□ -0.96
APOBEC3A-203ENST00000488758 BRCA1P38398 1863 aaKnown RBP9.02□□□□□ -0.96
APOBEC3A-203ENST00000488758 CCDC88AQ3V6T2 1871 aa9.02□□□□□ -0.96
APOBEC3A-203ENST00000488758 F8W031 263 aaPredicted RBP9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 NFKBIEO00221 500 aa9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 RAD17O75943 681 aa9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 DYNLL1P63167 89 aaKnown RBP9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 NECTIN1Q15223 517 aa9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 GRIK5Q16478 980 aa9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 DACT2Q5SW24 774 aa9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 VPS53Q5VIR6 699 aa9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 CREB3L3Q68CJ9 461 aa9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 FAM163AQ96GL9 167 aaPredicted RBP9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 MXD3Q9BW11 206 aa9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 NACAP1Q9BZK3 213 aa9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 KCNQ5Q9NR82 932 aa9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 AATFQ9NY61 560 aaKnown RBP eCLIP9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 TTF2Q9UNY4 1162 aaKnown RBP9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 SLC4A4Q9Y6R1 1079 aa9.02□□□□□ -0.97
APOBEC3A-203ENST00000488758 YDJCA8MPS7 323 aa9.01□□□□□ -0.97
APOBEC3A-203ENST00000488758 SLC27A2O14975 620 aa9.01□□□□□ -0.97
APOBEC3A-203ENST00000488758 FGAP02671 866 aa9.01□□□□□ -0.97
APOBEC3A-203ENST00000488758 HSPA6P17066 643 aa9.01□□□□□ -0.97
APOBEC3A-203ENST00000488758 RASSF7Q02833 373 aa9.01□□□□□ -0.97
APOBEC3A-203ENST00000488758 TNIP1Q15025 636 aa9.01□□□□□ -0.97
APOBEC3A-203ENST00000488758 RABEP1Q15276 862 aa9.01□□□□□ -0.97
APOBEC3A-203ENST00000488758 IMMTQ16891 758 aaKnown RBP9.01□□□□□ -0.97
APOBEC3A-203ENST00000488758 ADGRA1Q86SQ6 560 aa9.01□□□□□ -0.97
APOBEC3A-203ENST00000488758 CERS3Q8IU89 383 aa9.01□□□□□ -0.97
APOBEC3A-203ENST00000488758 LCORLQ8N3X6 602 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms