RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 PRMT2P55345 433 aa23.87■■□□□ 1.41
GGPS1-206ENST00000488594 KLHDC4Q8TBB5 520 aa23.87■■□□□ 1.41
GGPS1-206ENST00000488594 SLC5A1P13866 664 aa23.86■■□□□ 1.41
GGPS1-206ENST00000488594 LPIN2Q92539 896 aa23.86■■□□□ 1.41
GGPS1-206ENST00000488594 USP44Q9H0E7 712 aa23.86■■□□□ 1.41
GGPS1-206ENST00000488594 FAM151AQ8WW52 585 aa23.85■■□□□ 1.41
GGPS1-206ENST00000488594 EYA2O00167 538 aa23.84■■□□□ 1.41
GGPS1-206ENST00000488594 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.41
GGPS1-206ENST00000488594 MIGA2Q7L4E1 593 aa23.83■■□□□ 1.41
GGPS1-206ENST00000488594 ARHGAP39Q9C0H5 1083 aa23.83■■□□□ 1.41
GGPS1-206ENST00000488594 ANKRD23Q86SG2 305 aa23.82■■□□□ 1.4
GGPS1-206ENST00000488594 BRCA2P51587 3418 aa23.82■■□□□ 1.4
GGPS1-206ENST00000488594 INPP5BP32019 993 aa23.81■■□□□ 1.4
GGPS1-206ENST00000488594 RFX5P48382 616 aaPredicted RBP23.81■■□□□ 1.4
GGPS1-206ENST00000488594 C17orf99Q6UX52 265 aa23.81■■□□□ 1.4
GGPS1-206ENST00000488594 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.81■■□□□ 1.4
GGPS1-206ENST00000488594 SH3TC2Q8TF17 1288 aa23.81■■□□□ 1.4
GGPS1-206ENST00000488594 SSH1Q8WYL5 1049 aa23.81■■□□□ 1.4
GGPS1-206ENST00000488594 ZNF112Q9UJU3 913 aa23.81■■□□□ 1.4
GGPS1-206ENST00000488594 FBXO3Q9UK99 471 aa23.81■■□□□ 1.4
GGPS1-206ENST00000488594 KCNH4Q9UQ05 1017 aa23.81■■□□□ 1.4
GGPS1-206ENST00000488594 DAGLAQ9Y4D2 1042 aa23.81■■□□□ 1.4
GGPS1-206ENST00000488594 E9PSI1 815 aa23.8■■□□□ 1.4
GGPS1-206ENST00000488594 GNL3LQ9NVN8 582 aaKnown RBP23.8■■□□□ 1.4
GGPS1-206ENST00000488594 HOXD10P28358 340 aa23.79■■□□□ 1.4
GGPS1-206ENST00000488594 CDC42EP5Q6NZY7 148 aa23.79■■□□□ 1.4
GGPS1-206ENST00000488594 ZNF316A6NFI3 1004 aaPredicted RBP23.78■■□□□ 1.4
GGPS1-206ENST00000488594 PDHXO00330 501 aa23.78■■□□□ 1.4
GGPS1-206ENST00000488594 MYCP01106 439 aaPredicted RBP23.78■■□□□ 1.4
GGPS1-206ENST00000488594 TCP10Q12799 353 aa23.78■■□□□ 1.4
GGPS1-206ENST00000488594 NOL9Q5SY16 702 aaKnown RBP23.78■■□□□ 1.4
GGPS1-206ENST00000488594 CIAO1O76071 339 aa23.78■■□□□ 1.4
GGPS1-206ENST00000488594 LDHBP07195 334 aaKnown RBP23.78■■□□□ 1.4
GGPS1-206ENST00000488594 ATG9AQ7Z3C6 839 aa23.78■■□□□ 1.4
GGPS1-206ENST00000488594 SRRDQ9UH36 339 aa23.78■■□□□ 1.4
GGPS1-206ENST00000488594 CPA4Q9UI42 421 aa23.78■■□□□ 1.4
GGPS1-206ENST00000488594 SEMA3EO15041 775 aa23.77■■□□□ 1.4
GGPS1-206ENST00000488594 PSMC4P43686 418 aa23.77■■□□□ 1.4
GGPS1-206ENST00000488594 DIXDC1Q155Q3 683 aa23.77■■□□□ 1.4
GGPS1-206ENST00000488594 ALDH1L2Q3SY69 923 aa23.77■■□□□ 1.4
GGPS1-206ENST00000488594 SALL1Q9NSC2 1324 aa23.76■■□□□ 1.39
GGPS1-206ENST00000488594 PRDX5P30044 214 aa23.76■■□□□ 1.39
GGPS1-206ENST00000488594 FXR1P51114 621 aaKnown RBP eCLIP23.76■■□□□ 1.39
GGPS1-206ENST00000488594 NFIAQ12857 509 aa23.76■■□□□ 1.39
GGPS1-206ENST00000488594 ATP2B3Q16720 1220 aa23.76■■□□□ 1.39
GGPS1-206ENST00000488594 TRIM47Q96LD4 638 aa23.76■■□□□ 1.39
GGPS1-206ENST00000488594 PARK7Q99497 189 aaKnown RBP23.76■■□□□ 1.39
GGPS1-206ENST00000488594 USP40Q9NVE5 1235 aa23.76■■□□□ 1.39
GGPS1-206ENST00000488594 CEP126Q9P2H0 1117 aa23.76■■□□□ 1.39
GGPS1-206ENST00000488594 ADGRA2Q96PE1 1338 aa23.75■■□□□ 1.39
GGPS1-206ENST00000488594 CXCL11O14625 94 aa23.75■■□□□ 1.39
GGPS1-206ENST00000488594 FMNL1O95466 1100 aaPredicted RBP23.75■■□□□ 1.39
GGPS1-206ENST00000488594 NKX2-3Q8TAU0 364 aa23.75■■□□□ 1.39
GGPS1-206ENST00000488594 RAET1EQ8TD07 263 aa23.75■■□□□ 1.39
GGPS1-206ENST00000488594 FAM198AQ9UFP1 575 aa23.75■■□□□ 1.39
GGPS1-206ENST00000488594 DENND2AQ9ULE3 1009 aa23.75■■□□□ 1.39
GGPS1-206ENST00000488594 ZBTB22O15209 634 aa23.74■■□□□ 1.39
GGPS1-206ENST00000488594 UBTFL1P0CB47 393 aaPredicted RBP23.74■■□□□ 1.39
GGPS1-206ENST00000488594 OSBPP22059 807 aa23.74■■□□□ 1.39
GGPS1-206ENST00000488594 MOGSQ13724 837 aa23.74■■□□□ 1.39
GGPS1-206ENST00000488594 ZGPATQ8N5A5 531 aaKnown RBP23.74■■□□□ 1.39
GGPS1-206ENST00000488594 HDAC5Q9UQL6 1122 aa23.74■■□□□ 1.39
GGPS1-206ENST00000488594 COLQQ9Y215 455 aaPredicted RBP23.74■■□□□ 1.39
GGPS1-206ENST00000488594 CTGFP29279 349 aa23.73■■□□□ 1.39
GGPS1-206ENST00000488594 GRK4P32298 578 aa23.73■■□□□ 1.39
GGPS1-206ENST00000488594 IL15P40933 162 aaPredicted RBP23.72■■□□□ 1.39
GGPS1-206ENST00000488594 SLFN5Q08AF3 891 aa23.72■■□□□ 1.39
GGPS1-206ENST00000488594 SIL1Q9H173 461 aa23.72■■□□□ 1.39
GGPS1-206ENST00000488594 SMC4Q9NTJ3 1288 aa23.72■■□□□ 1.39
GGPS1-206ENST00000488594 MYPNQ86TC9 1320 aa23.72■■□□□ 1.39
GGPS1-206ENST00000488594 ZSWIM8A7E2V4 1837 aa23.72■■□□□ 1.39
GGPS1-206ENST00000488594 MYH13Q9UKX3 1938 aa23.71■■□□□ 1.39
GGPS1-206ENST00000488594 H0YGN5 161 aa23.71■■□□□ 1.39
GGPS1-206ENST00000488594 ENTPD3O75355 529 aa23.71■■□□□ 1.39
GGPS1-206ENST00000488594 ECM2O94769 699 aaPredicted RBP23.71■■□□□ 1.39
GGPS1-206ENST00000488594 FCGRTP55899 365 aa23.71■■□□□ 1.39
GGPS1-206ENST00000488594 IDI2Q9BXS1 227 aa23.71■■□□□ 1.39
GGPS1-206ENST00000488594 PICK1Q9NRD5 415 aa23.71■■□□□ 1.39
GGPS1-206ENST00000488594 MTFR1Q15390 333 aa23.7■■□□□ 1.38
GGPS1-206ENST00000488594 FASTKD5Q7L8L6 764 aaKnown RBP23.7■■□□□ 1.38
GGPS1-206ENST00000488594 SCYL3Q8IZE3 742 aa23.7■■□□□ 1.38
GGPS1-206ENST00000488594 GJB1P08034 283 aa23.69■■□□□ 1.38
GGPS1-206ENST00000488594 BCRP11274 1271 aa23.69■■□□□ 1.38
GGPS1-206ENST00000488594 PHKA1P46020 1223 aa23.69■■□□□ 1.38
GGPS1-206ENST00000488594 GPAT2Q6NUI2 795 aa23.69■■□□□ 1.38
GGPS1-206ENST00000488594 SLF2Q8IX21 1173 aa23.69■■□□□ 1.38
GGPS1-206ENST00000488594 SHISA4Q96DD7 197 aa23.69■■□□□ 1.38
GGPS1-206ENST00000488594 ATRNL1Q5VV63 1379 aa23.69■■□□□ 1.38
GGPS1-206ENST00000488594 PHF20L1A8MW92 1017 aa23.68■■□□□ 1.38
GGPS1-206ENST00000488594 GJA8P48165 433 aa23.68■■□□□ 1.38
GGPS1-206ENST00000488594 RGS3P49796 1198 aa23.68■■□□□ 1.38
GGPS1-206ENST00000488594 UBXN2AP68543 259 aa23.68■■□□□ 1.38
GGPS1-206ENST00000488594 ZFPM1Q8IX07 1006 aa23.68■■□□□ 1.38
GGPS1-206ENST00000488594 ZHX2Q9Y6X8 837 aa23.68■■□□□ 1.38
GGPS1-206ENST00000488594 GAKO14976 1311 aa23.68■■□□□ 1.38
GGPS1-206ENST00000488594 A0A0G2JLL6 359 aaPredicted RBP23.67■■□□□ 1.38
GGPS1-206ENST00000488594 CYP2C8P10632 490 aa23.67■■□□□ 1.38
GGPS1-206ENST00000488594 CCDC102BQ68D86 513 aa23.67■■□□□ 1.38
GGPS1-206ENST00000488594 PRRT2Q7Z6L0 340 aaPredicted RBP23.67■■□□□ 1.38
GGPS1-206ENST00000488594 SLAIN1Q8ND83 568 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms