RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ARMC9Q7Z3E5 817 aa18.35■□□□□ 0.53
CXCL12-207ENST00000488591 NSUN4Q96CB9 384 aaKnown RBP18.35■□□□□ 0.53
CXCL12-207ENST00000488591 GCC1Q96CN9 775 aa18.35■□□□□ 0.53
CXCL12-207ENST00000488591 NOL10Q9BSC4 688 aaKnown RBP18.35■□□□□ 0.53
CXCL12-207ENST00000488591 PPP1R12BO60237 982 aaPredicted RBP18.34■□□□□ 0.53
CXCL12-207ENST00000488591 VEGFBP49765 207 aa18.34■□□□□ 0.53
CXCL12-207ENST00000488591 NAA16Q6N069 864 aaPredicted RBP18.34■□□□□ 0.53
CXCL12-207ENST00000488591 FAM83AQ86UY5 434 aa18.34■□□□□ 0.53
CXCL12-207ENST00000488591 GPATCH3Q96I76 525 aa18.34■□□□□ 0.53
CXCL12-207ENST00000488591 CAPNS2Q96L46 248 aa18.34■□□□□ 0.53
CXCL12-207ENST00000488591 CEP350Q5VT06 3117 aa18.34■□□□□ 0.53
CXCL12-207ENST00000488591 WDR33Q9C0J8 1336 aaKnown RBP18.33■□□□□ 0.53
CXCL12-207ENST00000488591 GPR75-ASB3A0A0A6YYF3 556 aa18.33■□□□□ 0.52
CXCL12-207ENST00000488591 ATP5JP18859 108 aa18.33■□□□□ 0.52
CXCL12-207ENST00000488591 BTDP43251 543 aa18.33■□□□□ 0.52
CXCL12-207ENST00000488591 MAP3K12Q12852 859 aa18.33■□□□□ 0.52
CXCL12-207ENST00000488591 GRM1Q13255 1194 aa18.33■□□□□ 0.52
CXCL12-207ENST00000488591 HOOK2Q96ED9 719 aa18.33■□□□□ 0.52
CXCL12-207ENST00000488591 PIH1D3Q9NQM4 214 aaKnown RBP18.33■□□□□ 0.52
CXCL12-207ENST00000488591 PAPPA2Q9BXP8 1791 aa18.32■□□□□ 0.52
CXCL12-207ENST00000488591 IDH1O75874 414 aaKnown RBP18.32■□□□□ 0.52
CXCL12-207ENST00000488591 BAG3O95817 575 aa18.32■□□□□ 0.52
CXCL12-207ENST00000488591 MAP4K4O95819 1239 aaPredicted RBP18.32■□□□□ 0.52
CXCL12-207ENST00000488591 PRKG1Q13976 671 aa18.32■□□□□ 0.52
CXCL12-207ENST00000488591 NBPF12Q5TAG4 269 aaPredicted RBP18.32■□□□□ 0.52
CXCL12-207ENST00000488591 CYP4F22Q6NT55 531 aa18.32■□□□□ 0.52
CXCL12-207ENST00000488591 RGMBQ6NW40 437 aa18.32■□□□□ 0.52
CXCL12-207ENST00000488591 TMED8Q6PL24 325 aaPredicted RBP18.32■□□□□ 0.52
CXCL12-207ENST00000488591 JMYQ8N9B5 988 aa18.32■□□□□ 0.52
CXCL12-207ENST00000488591 DNAJC2Q99543 621 aaKnown RBP18.32■□□□□ 0.52
CXCL12-207ENST00000488591 TMEM39BQ9GZU3 492 aa18.32■□□□□ 0.52
CXCL12-207ENST00000488591 ECHDC1Q9NTX5 307 aa18.32■□□□□ 0.52
CXCL12-207ENST00000488591 UBE2Q2LH0YL09 131 aa18.31■□□□□ 0.52
CXCL12-207ENST00000488591 ZNF157P51786 506 aaPredicted RBP18.31■□□□□ 0.52
CXCL12-207ENST00000488591 IRX6P78412 446 aaPredicted RBP18.31■□□□□ 0.52
CXCL12-207ENST00000488591 MAPK8IP2Q13387 824 aaPredicted RBP18.31■□□□□ 0.52
CXCL12-207ENST00000488591 ANKRD45Q5TZF3 282 aa18.31■□□□□ 0.52
CXCL12-207ENST00000488591 ZNF384Q8TF68 577 aa18.31■□□□□ 0.52
CXCL12-207ENST00000488591 FAM151AQ8WW52 585 aa18.31■□□□□ 0.52
CXCL12-207ENST00000488591 CCDC102AQ96A19 550 aa18.31■□□□□ 0.52
CXCL12-207ENST00000488591 BOLA2Q9H3K6 86 aa18.31■□□□□ 0.52
CXCL12-207ENST00000488591 ANGEL1Q9UNK9 670 aaKnown RBP18.31■□□□□ 0.52
CXCL12-207ENST00000488591 NDUFB9Q9Y6M9 179 aa18.31■□□□□ 0.52
CXCL12-207ENST00000488591 GOLIM4O00461 696 aa18.3■□□□□ 0.52
CXCL12-207ENST00000488591 IREB2P48200 963 aaKnown RBP18.3■□□□□ 0.52
CXCL12-207ENST00000488591 TCP10Q12799 353 aa18.3■□□□□ 0.52
CXCL12-207ENST00000488591 TEPSINQ96N21 525 aa18.3■□□□□ 0.52
CXCL12-207ENST00000488591 IDI2Q9BXS1 227 aa18.3■□□□□ 0.52
CXCL12-207ENST00000488591 ANTXR1Q9H6X2 564 aa18.3■□□□□ 0.52
CXCL12-207ENST00000488591 ENTPD3O75355 529 aa18.29■□□□□ 0.52
CXCL12-207ENST00000488591 PLCG2P16885 1265 aa18.29■□□□□ 0.52
CXCL12-207ENST00000488591 CYP7A1P22680 504 aa18.29■□□□□ 0.52
CXCL12-207ENST00000488591 MOB2Q70IA6 237 aa18.29■□□□□ 0.52
CXCL12-207ENST00000488591 HAUS7Q99871 368 aa18.29■□□□□ 0.52
CXCL12-207ENST00000488591 PAG1Q9NWQ8 432 aa18.29■□□□□ 0.52
CXCL12-207ENST00000488591 MAST2Q6P0Q8 1798 aa18.29■□□□□ 0.52
CXCL12-207ENST00000488591 MAP2K2P36507 400 aa18.28■□□□□ 0.52
CXCL12-207ENST00000488591 NFIAQ12857 509 aa18.28■□□□□ 0.52
CXCL12-207ENST00000488591 MAP3K11Q16584 847 aa18.28■□□□□ 0.52
CXCL12-207ENST00000488591 CERS3Q8IU89 383 aa18.28■□□□□ 0.52
CXCL12-207ENST00000488591 MAGEB6Q8N7X4 407 aa18.28■□□□□ 0.52
CXCL12-207ENST00000488591 TTC41PQ6P2S7 1318 aa18.27■□□□□ 0.52
CXCL12-207ENST00000488591 MYO5AQ9Y4I1 1855 aaKnown RBP18.27■□□□□ 0.52
CXCL12-207ENST00000488591 UNCXA6NJT0 531 aa18.27■□□□□ 0.52
CXCL12-207ENST00000488591 ERC2O15083 957 aa18.27■□□□□ 0.52
CXCL12-207ENST00000488591 RGS3P49796 1198 aa18.27■□□□□ 0.52
CXCL12-207ENST00000488591 RHBDL3P58872 404 aa18.27■□□□□ 0.52
CXCL12-207ENST00000488591 NOGQ13253 232 aa18.27■□□□□ 0.52
CXCL12-207ENST00000488591 DCAF15Q66K64 600 aa18.27■□□□□ 0.52
CXCL12-207ENST00000488591 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.27■□□□□ 0.52
CXCL12-207ENST00000488591 AATFQ9NY61 560 aaKnown RBP eCLIP18.27■□□□□ 0.52
CXCL12-207ENST00000488591 FAM198AQ9UFP1 575 aa18.27■□□□□ 0.52
CXCL12-207ENST00000488591 RPAP1Q9BWH6 1393 aaPredicted RBP18.27■□□□□ 0.51
CXCL12-207ENST00000488591 AK9Q5TCS8 1911 aa18.26■□□□□ 0.51
CXCL12-207ENST00000488591 USP2O75604 605 aaPredicted RBP18.26■□□□□ 0.51
CXCL12-207ENST00000488591 NPM3O75607 178 aaKnown RBP18.26■□□□□ 0.51
CXCL12-207ENST00000488591 WDHD1O75717 1129 aaPredicted RBP18.26■□□□□ 0.51
CXCL12-207ENST00000488591 PPP4CP60510 307 aa18.26■□□□□ 0.51
CXCL12-207ENST00000488591 PICALMQ13492 652 aa18.26■□□□□ 0.51
CXCL12-207ENST00000488591 LDLRAD1Q5T700 205 aa18.26■□□□□ 0.51
CXCL12-207ENST00000488591 SLC9C2Q5TAH2 1124 aa18.26■□□□□ 0.51
CXCL12-207ENST00000488591 ZSCAN29Q8IWY8 852 aaPredicted RBP18.26■□□□□ 0.51
CXCL12-207ENST00000488591 TEX11Q8IYF3 940 aa18.26■□□□□ 0.51
CXCL12-207ENST00000488591 DOCK2Q92608 1830 aa18.26■□□□□ 0.51
CXCL12-207ENST00000488591 SSC5DA1L4H1 1573 aa18.25■□□□□ 0.51
CXCL12-207ENST00000488591 IGHDP01880 384 aa18.25■□□□□ 0.51
CXCL12-207ENST00000488591 MAP2K1Q02750 393 aaPredicted RBP18.25■□□□□ 0.51
CXCL12-207ENST00000488591 ADGRA1Q86SQ6 560 aa18.25■□□□□ 0.51
CXCL12-207ENST00000488591 CDAN1Q8IWY9 1227 aa18.25■□□□□ 0.51
CXCL12-207ENST00000488591 SMC5Q8IY18 1101 aa18.25■□□□□ 0.51
CXCL12-207ENST00000488591 ANKRD13AQ8IZ07 590 aa18.25■□□□□ 0.51
CXCL12-207ENST00000488591 SH3RF3Q8TEJ3 882 aaPredicted RBP18.25■□□□□ 0.51
CXCL12-207ENST00000488591 SLC10A4Q96EP9 437 aa18.25■□□□□ 0.51
CXCL12-207ENST00000488591 FZD1Q9UP38 647 aa18.25■□□□□ 0.51
CXCL12-207ENST00000488591 FAM155AB1AL88 458 aaPredicted RBP18.24■□□□□ 0.51
CXCL12-207ENST00000488591 AOC2O75106 756 aa18.24■□□□□ 0.51
CXCL12-207ENST00000488591 SLC10A3P09131 477 aa18.24■□□□□ 0.51
CXCL12-207ENST00000488591 PDE6AP16499 860 aa18.24■□□□□ 0.51
CXCL12-207ENST00000488591 MX1P20591 662 aa18.24■□□□□ 0.51
CXCL12-207ENST00000488591 ZSCAN25Q6NSZ9 544 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms