RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 AMPHP49418 695 aa7.23□□□□□ -1.25
SIK3-212ENST00000488337 PIP4K2BP78356 416 aa7.23□□□□□ -1.25
SIK3-212ENST00000488337 CCDC170Q8IYT3 715 aa7.23□□□□□ -1.25
SIK3-212ENST00000488337 CARD6Q9BX69 1037 aa7.23□□□□□ -1.25
SIK3-212ENST00000488337 ABCF2Q9UG63 623 aa7.23□□□□□ -1.25
SIK3-212ENST00000488337 ZNF518AQ6AHZ1 1483 aa7.23□□□□□ -1.25
SIK3-212ENST00000488337 PPIP5K1Q6PFW1 1433 aa7.23□□□□□ -1.25
SIK3-212ENST00000488337 HMMRO75330 724 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 VCAM1P19320 739 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 CCT5P48643 541 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 IRAK1P51617 712 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 POSTNQ15063 836 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 KIAA0825Q8IV33 1275 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 CXorf38Q8TB03 319 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 TRMT1Q9NXH9 659 aaKnown RBP7.22□□□□□ -1.25
SIK3-212ENST00000488337 GGA2Q9UJY4 613 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 MYO6Q9UM54 1294 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 RGS12O14924 1447 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 NUTM2FA1L443 756 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 B4DLN1 442 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 EBAG9O00559 213 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 MEFVO15553 781 aaPredicted RBP7.22□□□□□ -1.25
SIK3-212ENST00000488337 HARSP12081 509 aaKnown RBP7.22□□□□□ -1.25
SIK3-212ENST00000488337 ATP5JP18859 108 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 CEP85LQ5SZL2 805 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 MAMSTRQ6ZN01 415 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 PARP9Q8IXQ6 854 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 PAPOLBQ9NRJ5 636 aaKnown RBP7.22□□□□□ -1.25
SIK3-212ENST00000488337 TRPC6Q9Y210 931 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 CNPY2Q9Y2B0 182 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 THRAP3Q9Y2W1 955 aaKnown RBP7.22□□□□□ -1.25
SIK3-212ENST00000488337 GLI2P10070 1586 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 E2F6O75461 281 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 MCM2P49736 904 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 DBN1Q16643 649 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 ANKLE2Q86XL3 938 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 SPATS2Q86XZ4 545 aaKnown RBP7.22□□□□□ -1.25
SIK3-212ENST00000488337 BRD8Q9H0E9 1235 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 WDR33Q9C0J8 1336 aaKnown RBP7.22□□□□□ -1.25
SIK3-212ENST00000488337 ABCC1P33527 1531 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 CSB-PGBD3P0DP91 1061 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 PDHBP11177 359 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 NEK4P51957 841 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 PHEXP78562 749 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 NFE2L2Q16236 605 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 NOL8Q76FK4 1167 aaKnown RBP7.22□□□□□ -1.25
SIK3-212ENST00000488337 TXNDC2Q86VQ3 553 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 PROSER2Q86WR7 435 aaPredicted RBP7.22□□□□□ -1.25
SIK3-212ENST00000488337 CCDC50Q8IVM0 306 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 KIFC2Q96AC6 838 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 CORO1BQ9BR76 489 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 RETREG1Q9H6L5 497 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 SLC40A1Q9NP59 571 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 WDR37Q9Y2I8 494 aa7.22□□□□□ -1.25
SIK3-212ENST00000488337 VAMP4O75379 141 aa7.21□□□□□ -1.25
SIK3-212ENST00000488337 PSME1Q06323 249 aa7.21□□□□□ -1.25
SIK3-212ENST00000488337 BLMHQ13867 455 aa7.21□□□□□ -1.25
SIK3-212ENST00000488337 NAA25Q14CX7 972 aa7.21□□□□□ -1.25
SIK3-212ENST00000488337 TAF7Q15545 349 aaPredicted RBP7.21□□□□□ -1.25
SIK3-212ENST00000488337 PLEKHF1Q96S99 279 aa7.21□□□□□ -1.25
SIK3-212ENST00000488337 SH3GL2Q99962 352 aa7.21□□□□□ -1.25
SIK3-212ENST00000488337 ACBD3Q9H3P7 528 aa7.21□□□□□ -1.25
SIK3-212ENST00000488337 CABP1Q9NZU7 370 aa7.21□□□□□ -1.25
SIK3-212ENST00000488337 GMEB1Q9Y692 573 aa7.21□□□□□ -1.25
SIK3-212ENST00000488337 TIMM44O43615 452 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 STIP1P31948 543 aaKnown RBP7.21□□□□□ -1.26
SIK3-212ENST00000488337 GNAQP50148 359 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 MYOCDQ8IZQ8 938 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 NGDNQ8NEJ9 315 aaKnown RBP7.21□□□□□ -1.26
SIK3-212ENST00000488337 STK31Q9BXU1 1019 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 GPCPD1Q9NPB8 672 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 TUBGCP4Q9UGJ1 667 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 NPHP4O75161 1426 aaPredicted RBP7.21□□□□□ -1.26
SIK3-212ENST00000488337 MYH15Q9Y2K3 1946 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 EIF3HO15372 352 aaKnown RBP eCLIP7.21□□□□□ -1.26
SIK3-212ENST00000488337 PENKP01210 267 aaPredicted RBP7.21□□□□□ -1.26
SIK3-212ENST00000488337 ACCSLQ4AC99 568 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 CCDC40Q4G0X9 1142 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 C16orf87Q6PH81 154 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 C6orf89Q6UWU4 347 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 DTNBP1Q96EV8 351 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 FAM81BQ96LP2 452 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 TRIM5Q9C035 493 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 TPX2Q9ULW0 747 aaKnown RBP7.21□□□□□ -1.26
SIK3-212ENST00000488337 FRMD4BQ9Y2L6 1034 aa7.21□□□□□ -1.26
SIK3-212ENST00000488337 VASPP50552 380 aaPredicted RBP7.2□□□□□ -1.26
SIK3-212ENST00000488337 SF3B2Q13435 895 aaKnown RBP7.2□□□□□ -1.26
SIK3-212ENST00000488337 DRP2Q13474 957 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 SNCBQ16143 134 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 HSP90AB2PQ58FF8 381 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 SLC4A10Q6U841 1118 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 FUKQ8N0W3 1084 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 TSPYL6Q8N831 410 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 TRIM58Q8NG06 486 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 AFAP1L1Q8TED9 768 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 CCDC114Q96M63 670 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 KAT14Q9H8E8 782 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 ZWILCHQ9H900 591 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 IMPACTQ9P2X3 320 aa7.2□□□□□ -1.26
SIK3-212ENST00000488337 EFCAB6Q5THR3 1501 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms