RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 ADGRA1Q86SQ6 560 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 RIOK1Q9BRS2 568 aaKnown RBP18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 QTRT2Q9H974 415 aaKnown RBP18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 RAI14Q9P0K7 980 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 ABCF2Q9UG63 623 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 ANAPC4Q9UJX5 808 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 EP400Q96L91 3159 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 NID2Q14112 1375 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 IRS2Q9Y4H2 1338 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 MAGEB6P1A0A0J9YX57 407 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 CPLX1O14810 134 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 IGSF3O75054 1194 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 SLC27A3Q5K4L6 730 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 APOA5Q6Q788 366 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 MFSD6Q6ZSS7 791 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 FUCA2Q9BTY2 467 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 LY9Q9HBG7 655 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 RCOR1Q9UKL0 485 aa18.72■□□□□ 0.59
RAPGEF3-211ENST00000488250 CDKL5O76039 1030 aa18.71■□□□□ 0.59
RAPGEF3-211ENST00000488250 MIGA1Q8NAN2 632 aa18.71■□□□□ 0.59
RAPGEF3-211ENST00000488250 ZNF396Q96N95 335 aaPredicted RBP18.71■□□□□ 0.59
RAPGEF3-211ENST00000488250 RNF41Q9H4P4 317 aaPredicted RBP18.71■□□□□ 0.59
RAPGEF3-211ENST00000488250 ZSWIM5Q9P217 1185 aa18.71■□□□□ 0.59
RAPGEF3-211ENST00000488250 ORC3Q9UBD5 711 aaPredicted RBP18.71■□□□□ 0.59
RAPGEF3-211ENST00000488250 TACC3Q9Y6A5 838 aa18.71■□□□□ 0.59
RAPGEF3-211ENST00000488250 UBR3Q6ZT12 1888 aa18.71■□□□□ 0.59
RAPGEF3-211ENST00000488250 GOLGA6L4A6NEF3 574 aa18.7■□□□□ 0.58
RAPGEF3-211ENST00000488250 HIBADHP31937 336 aaKnown RBP18.7■□□□□ 0.58
RAPGEF3-211ENST00000488250 METAP2P50579 478 aaKnown RBP eCLIP18.7■□□□□ 0.58
RAPGEF3-211ENST00000488250 CTDSPL2Q05D32 466 aa18.7■□□□□ 0.58
RAPGEF3-211ENST00000488250 UVSSAQ2YD98 709 aa18.7■□□□□ 0.58
RAPGEF3-211ENST00000488250 FBXO18Q8NFZ0 1043 aa18.7■□□□□ 0.58
RAPGEF3-211ENST00000488250 KLRK1P26718 216 aa18.7■□□□□ 0.58
RAPGEF3-211ENST00000488250 TMEM67Q5HYA8 995 aa18.7■□□□□ 0.58
RAPGEF3-211ENST00000488250 GIMAP6Q6P9H5 292 aa18.7■□□□□ 0.58
RAPGEF3-211ENST00000488250 TRIM44Q96DX7 344 aaPredicted RBP18.7■□□□□ 0.58
RAPGEF3-211ENST00000488250 PGBD1Q96JS3 809 aa18.7■□□□□ 0.58
RAPGEF3-211ENST00000488250 C8orf76Q96K31 380 aa18.7■□□□□ 0.58
RAPGEF3-211ENST00000488250 DDX19AQ9NUU7 478 aaKnown RBP18.7■□□□□ 0.58
RAPGEF3-211ENST00000488250 ZBTB43O43298 467 aa18.69■□□□□ 0.58
RAPGEF3-211ENST00000488250 KDM4AO75164 1064 aa18.69■□□□□ 0.58
RAPGEF3-211ENST00000488250 LIG1P18858 919 aa18.69■□□□□ 0.58
RAPGEF3-211ENST00000488250 GRAPQ13588 217 aa18.69■□□□□ 0.58
RAPGEF3-211ENST00000488250 CPLX2Q6PUV4 134 aaKnown RBP18.69■□□□□ 0.58
RAPGEF3-211ENST00000488250 CNBD1Q8NA66 436 aa18.69■□□□□ 0.58
RAPGEF3-211ENST00000488250 GRAPLQ8TC17 118 aaPredicted RBP18.69■□□□□ 0.58
RAPGEF3-211ENST00000488250 BRIP1Q9BX63 1249 aa18.69■□□□□ 0.58
RAPGEF3-211ENST00000488250 PPARAQ07869 468 aa18.68■□□□□ 0.58
RAPGEF3-211ENST00000488250 CCDC24Q8N4L8 307 aa18.68■□□□□ 0.58
RAPGEF3-211ENST00000488250 ZNF384Q8TF68 577 aa18.68■□□□□ 0.58
RAPGEF3-211ENST00000488250 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.68■□□□□ 0.58
RAPGEF3-211ENST00000488250 HMGB2P26583 209 aaKnown RBP18.68■□□□□ 0.58
RAPGEF3-211ENST00000488250 RCAN1P53805 252 aa18.68■□□□□ 0.58
RAPGEF3-211ENST00000488250 HS1BP3Q53T59 392 aa18.68■□□□□ 0.58
RAPGEF3-211ENST00000488250 NSUN4Q96CB9 384 aaKnown RBP18.68■□□□□ 0.58
RAPGEF3-211ENST00000488250 NUP62CLQ9H1M0 184 aa18.68■□□□□ 0.58
RAPGEF3-211ENST00000488250 INCENPQ9NQS7 918 aa18.68■□□□□ 0.58
RAPGEF3-211ENST00000488250 LEMD3Q9Y2U8 911 aa18.68■□□□□ 0.58
RAPGEF3-211ENST00000488250 MYH13Q9UKX3 1938 aa18.68■□□□□ 0.58
RAPGEF3-211ENST00000488250 MAST2Q6P0Q8 1798 aa18.67■□□□□ 0.58
RAPGEF3-211ENST00000488250 IFIT3O14879 490 aaKnown RBP18.67■□□□□ 0.58
RAPGEF3-211ENST00000488250 NPHP1O15259 732 aa18.67■□□□□ 0.58
RAPGEF3-211ENST00000488250 SART3Q15020 963 aaKnown RBP18.67■□□□□ 0.58
RAPGEF3-211ENST00000488250 NTRK3Q16288 839 aa18.67■□□□□ 0.58
RAPGEF3-211ENST00000488250 RBM43Q6ZSC3 357 aaKnown RBP18.67■□□□□ 0.58
RAPGEF3-211ENST00000488250 BRAPQ7Z569 592 aa18.67■□□□□ 0.58
RAPGEF3-211ENST00000488250 TMTC2Q8N394 836 aa18.67■□□□□ 0.58
RAPGEF3-211ENST00000488250 RNF214Q8ND24 703 aa18.67■□□□□ 0.58
RAPGEF3-211ENST00000488250 SENP2Q9HC62 589 aa18.67■□□□□ 0.58
RAPGEF3-211ENST00000488250 PCP11498 1178 aaKnown RBP18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 FOSBP53539 338 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 PRR5LQ6MZQ0 368 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 USP28Q96RU2 1077 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 FAM217BQ9NTX9 383 aaPredicted RBP18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 SLC12A7Q9Y666 1083 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 STK36Q9NRP7 1315 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 GYS1P13807 737 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 GUCY1B3Q02153 619 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 MAP3K11Q16584 847 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 CRY2Q49AN0 593 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 TPRNQ4KMQ1 711 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 NFXL1Q6ZNB6 911 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 C15orf52Q6ZUT6 534 aaKnown RBP18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 RAB11FIP4Q86YS3 637 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 SDR42E1Q8WUS8 393 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 CLSTN2Q9H4D0 955 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 RTN4Q9NQC3 1192 aaKnown RBP18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 RRAGDQ9NQL2 400 aaPredicted RBP18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 DACT1Q9NYF0 836 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 RTEL1Q9NZ71 1219 aa18.66■□□□□ 0.58
RAPGEF3-211ENST00000488250 CCDC69A6NI79 296 aa18.65■□□□□ 0.58
RAPGEF3-211ENST00000488250 GOLGA8AA7E2F4 631 aa18.65■□□□□ 0.58
RAPGEF3-211ENST00000488250 PPFIA3O75145 1194 aa18.65■□□□□ 0.58
RAPGEF3-211ENST00000488250 FGRP09769 529 aa18.65■□□□□ 0.58
RAPGEF3-211ENST00000488250 CDC27P30260 824 aa18.65■□□□□ 0.58
RAPGEF3-211ENST00000488250 TFCP2L1Q9NZI6 479 aa18.65■□□□□ 0.58
RAPGEF3-211ENST00000488250 KIAA1551Q9HCM1 1747 aa18.65■□□□□ 0.58
RAPGEF3-211ENST00000488250 CCDC192P0DO97 292 aa18.64■□□□□ 0.58
RAPGEF3-211ENST00000488250 RBM6P78332 1123 aaKnown RBP18.64■□□□□ 0.58
RAPGEF3-211ENST00000488250 MECOMQ03112 1051 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms