RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 USP40Q9NVE5 1235 aa19.05■□□□□ 0.64
TRIM50-203ENST00000488217 DAGLAQ9Y4D2 1042 aa19.05■□□□□ 0.64
TRIM50-203ENST00000488217 SNCAIPQ9Y6H5 919 aa19.05■□□□□ 0.64
TRIM50-203ENST00000488217 IRF6O14896 467 aa19.04■□□□□ 0.64
TRIM50-203ENST00000488217 SEMA3EO15041 775 aa19.04■□□□□ 0.64
TRIM50-203ENST00000488217 WDHD1O75717 1129 aaPredicted RBP19.04■□□□□ 0.64
TRIM50-203ENST00000488217 TIMM10P62072 90 aa19.04■□□□□ 0.64
TRIM50-203ENST00000488217 TCP10Q12799 353 aa19.04■□□□□ 0.64
TRIM50-203ENST00000488217 TAF1CQ15572 869 aaPredicted RBP19.04■□□□□ 0.64
TRIM50-203ENST00000488217 MEIS3Q99687 375 aa19.04■□□□□ 0.64
TRIM50-203ENST00000488217 ZBTB22O15209 634 aa19.03■□□□□ 0.64
TRIM50-203ENST00000488217 SLC34A2O95436 690 aa19.03■□□□□ 0.64
TRIM50-203ENST00000488217 PRDX5P30044 214 aa19.03■□□□□ 0.64
TRIM50-203ENST00000488217 PHKA1P46020 1223 aa19.03■□□□□ 0.64
TRIM50-203ENST00000488217 PPATQ06203 517 aa19.03■□□□□ 0.64
TRIM50-203ENST00000488217 SNAPC2Q13487 334 aa19.03■□□□□ 0.64
TRIM50-203ENST00000488217 SALL1Q9NSC2 1324 aa19.02■□□□□ 0.64
TRIM50-203ENST00000488217 IPO8O15397 1037 aaKnown RBP19.02■□□□□ 0.64
TRIM50-203ENST00000488217 GNAI3P08754 354 aa19.02■□□□□ 0.64
TRIM50-203ENST00000488217 ADORA1P30542 326 aa19.02■□□□□ 0.64
TRIM50-203ENST00000488217 CAP1Q01518 475 aa19.02■□□□□ 0.64
TRIM50-203ENST00000488217 NFIAQ12857 509 aa19.02■□□□□ 0.64
TRIM50-203ENST00000488217 PPIL2Q13356 520 aa19.02■□□□□ 0.64
TRIM50-203ENST00000488217 CCDC102BQ68D86 513 aa19.02■□□□□ 0.64
TRIM50-203ENST00000488217 ZCCHC17Q9NP64 241 aaKnown RBP19.02■□□□□ 0.64
TRIM50-203ENST00000488217 ZNF112Q9UJU3 913 aa19.02■□□□□ 0.64
TRIM50-203ENST00000488217 A0A1B0GUL6 1792 aa19.01■□□□□ 0.63
TRIM50-203ENST00000488217 BTBD19C9JJ37 291 aa19.01■□□□□ 0.63
TRIM50-203ENST00000488217 SRGAP3O43295 1099 aa19.01■□□□□ 0.63
TRIM50-203ENST00000488217 ZGPATQ8N5A5 531 aaKnown RBP19.01■□□□□ 0.63
TRIM50-203ENST00000488217 FAM198AQ9UFP1 575 aa19.01■□□□□ 0.63
TRIM50-203ENST00000488217 AKAP2Q9Y2D5 859 aa19.01■□□□□ 0.63
TRIM50-203ENST00000488217 TLR2O60603 784 aa19■□□□□ 0.63
TRIM50-203ENST00000488217 INPP5BP32019 993 aa19■□□□□ 0.63
TRIM50-203ENST00000488217 ZFPM1Q8IX07 1006 aa19■□□□□ 0.63
TRIM50-203ENST00000488217 ARMC5Q96C12 935 aa19■□□□□ 0.63
TRIM50-203ENST00000488217 TFCP2Q12800 502 aa18.99■□□□□ 0.63
TRIM50-203ENST00000488217 PRPF38BQ5VTL8 546 aaKnown RBP18.99■□□□□ 0.63
TRIM50-203ENST00000488217 FAM163AQ96GL9 167 aaPredicted RBP18.99■□□□□ 0.63
TRIM50-203ENST00000488217 POTEFA5A3E0 1075 aa18.98■□□□□ 0.63
TRIM50-203ENST00000488217 MTX1Q13505 466 aa18.98■□□□□ 0.63
TRIM50-203ENST00000488217 SPTY2D1Q68D10 685 aaPredicted RBP18.98■□□□□ 0.63
TRIM50-203ENST00000488217 NBPF11Q86T75 865 aa18.98■□□□□ 0.63
TRIM50-203ENST00000488217 SLF2Q8IX21 1173 aa18.98■□□□□ 0.63
TRIM50-203ENST00000488217 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.98■□□□□ 0.63
TRIM50-203ENST00000488217 XAGE2Q96GT9 111 aa18.98■□□□□ 0.63
TRIM50-203ENST00000488217 ABCF2Q9UG63 623 aa18.98■□□□□ 0.63
TRIM50-203ENST00000488217 RPAP1Q9BWH6 1393 aaPredicted RBP18.97■□□□□ 0.63
TRIM50-203ENST00000488217 A0A1B0GUL7 405 aa18.97■□□□□ 0.63
TRIM50-203ENST00000488217 ENTPD3O75355 529 aa18.97■□□□□ 0.63
TRIM50-203ENST00000488217 RASGRF1Q13972 1273 aa18.97■□□□□ 0.63
TRIM50-203ENST00000488217 KIF22Q14807 665 aa18.97■□□□□ 0.63
TRIM50-203ENST00000488217 NEUROD6Q96NK8 337 aa18.97■□□□□ 0.63
TRIM50-203ENST00000488217 IDI2Q9BXS1 227 aa18.97■□□□□ 0.63
TRIM50-203ENST00000488217 BCAR3O75815 825 aa18.96■□□□□ 0.63
TRIM50-203ENST00000488217 GNAI2P04899 355 aa18.96■□□□□ 0.63
TRIM50-203ENST00000488217 MVPQ14764 893 aaKnown RBP18.96■□□□□ 0.63
TRIM50-203ENST00000488217 ANKRD23Q86SG2 305 aa18.96■□□□□ 0.63
TRIM50-203ENST00000488217 TMEM106CQ9BVX2 250 aa18.96■□□□□ 0.63
TRIM50-203ENST00000488217 KCNH4Q9UQ05 1017 aa18.96■□□□□ 0.63
TRIM50-203ENST00000488217 ECM29Q5VYK3 1845 aa18.95■□□□□ 0.62
TRIM50-203ENST00000488217 HTTP42858 3142 aa18.95■□□□□ 0.62
TRIM50-203ENST00000488217 GNRH1P01148 92 aa18.95■□□□□ 0.62
TRIM50-203ENST00000488217 TRIM27P14373 513 aa18.95■□□□□ 0.62
TRIM50-203ENST00000488217 RGS3P49796 1198 aa18.95■□□□□ 0.62
TRIM50-203ENST00000488217 MAP3K10Q02779 954 aa18.95■□□□□ 0.62
TRIM50-203ENST00000488217 NOL9Q5SY16 702 aaKnown RBP18.95■□□□□ 0.62
TRIM50-203ENST00000488217 C17orf99Q6UX52 265 aa18.95■□□□□ 0.62
TRIM50-203ENST00000488217 ATF7IPQ6VMQ6 1270 aa18.95■□□□□ 0.62
TRIM50-203ENST00000488217 DZIP1Q86YF9 867 aaKnown RBP18.95■□□□□ 0.62
TRIM50-203ENST00000488217 FRAT1Q92837 279 aaPredicted RBP18.95■□□□□ 0.62
TRIM50-203ENST00000488217 GAKO14976 1311 aa18.95■□□□□ 0.62
TRIM50-203ENST00000488217 PDS5AQ29RF7 1337 aaKnown RBP18.95■□□□□ 0.62
TRIM50-203ENST00000488217 PHF20L1A8MW92 1017 aa18.94■□□□□ 0.62
TRIM50-203ENST00000488217 PDHXO00330 501 aa18.94■□□□□ 0.62
TRIM50-203ENST00000488217 CXCL11O14625 94 aa18.94■□□□□ 0.62
TRIM50-203ENST00000488217 EN2P19622 333 aaPredicted RBP18.94■□□□□ 0.62
TRIM50-203ENST00000488217 LACTBP83111 547 aaPredicted RBP18.94■□□□□ 0.62
TRIM50-203ENST00000488217 G3BP1Q13283 466 aaKnown RBP eCLIP18.94■□□□□ 0.62
TRIM50-203ENST00000488217 SLC9C1Q4G0N8 1177 aa18.94■□□□□ 0.62
TRIM50-203ENST00000488217 ERICH6Q7L0X2 663 aa18.94■□□□□ 0.62
TRIM50-203ENST00000488217 ZNF333Q96JL9 665 aa18.94■□□□□ 0.62
TRIM50-203ENST00000488217 PTCH2Q9Y6C5 1203 aa18.94■□□□□ 0.62
TRIM50-203ENST00000488217 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.94■□□□□ 0.62
TRIM50-203ENST00000488217 CENPFP49454 3210 aa18.94■□□□□ 0.62
TRIM50-203ENST00000488217 MOGSQ13724 837 aa18.93■□□□□ 0.62
TRIM50-203ENST00000488217 GORABQ5T7V8 394 aa18.93■□□□□ 0.62
TRIM50-203ENST00000488217 ZSCAN29Q8IWY8 852 aaPredicted RBP18.93■□□□□ 0.62
TRIM50-203ENST00000488217 ARHGAP39Q9C0H5 1083 aa18.93■□□□□ 0.62
TRIM50-203ENST00000488217 CPA4Q9UI42 421 aa18.93■□□□□ 0.62
TRIM50-203ENST00000488217 ZHX2Q9Y6X8 837 aa18.93■□□□□ 0.62
TRIM50-203ENST00000488217 GPR75-ASB3A0A0A6YYF3 556 aa18.92■□□□□ 0.62
TRIM50-203ENST00000488217 MECOMQ03112 1051 aa18.92■□□□□ 0.62
TRIM50-203ENST00000488217 SH3BP5LQ7L8J4 393 aa18.92■□□□□ 0.62
TRIM50-203ENST00000488217 CLUAP1Q96AJ1 413 aa18.92■□□□□ 0.62
TRIM50-203ENST00000488217 PICK1Q9NRD5 415 aa18.92■□□□□ 0.62
TRIM50-203ENST00000488217 HMG20BQ9P0W2 317 aa18.92■□□□□ 0.62
TRIM50-203ENST00000488217 TNNQ9UQP3 1299 aa18.92■□□□□ 0.62
TRIM50-203ENST00000488217 DDTLA6NHG4 134 aaPredicted RBP18.91■□□□□ 0.62
TRIM50-203ENST00000488217 LDHCP07864 332 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms