RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 C4orf50Q6ZRC1 276 aa17.21■□□□□ 0.34
PKD1-220ENST00000487932 RSPH3Q86UC2 560 aa17.21■□□□□ 0.34
PKD1-220ENST00000487932 CCDC186Q7Z3E2 898 aa17.2■□□□□ 0.34
PKD1-220ENST00000487932 MICALL1Q8N3F8 863 aa17.2■□□□□ 0.34
PKD1-220ENST00000487932 CNBD1Q8NA66 436 aa17.2■□□□□ 0.34
PKD1-220ENST00000487932 RNF113AO15541 343 aaKnown RBP17.2■□□□□ 0.34
PKD1-220ENST00000487932 STK10O94804 968 aaKnown RBP17.2■□□□□ 0.34
PKD1-220ENST00000487932 TCIRG1Q13488 830 aa17.2■□□□□ 0.34
PKD1-220ENST00000487932 LARGE2Q8N3Y3 721 aa17.2■□□□□ 0.34
PKD1-220ENST00000487932 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.2■□□□□ 0.34
PKD1-220ENST00000487932 SETDB1Q15047 1291 aa17.2■□□□□ 0.34
PKD1-220ENST00000487932 WDR7Q9Y4E6 1490 aa17.2■□□□□ 0.34
PKD1-220ENST00000487932 RPL13P26373 211 aaKnown RBP17.2■□□□□ 0.34
PKD1-220ENST00000487932 MAN1A1P33908 653 aa17.2■□□□□ 0.34
PKD1-220ENST00000487932 CCDC110Q8TBZ0 833 aa17.2■□□□□ 0.34
PKD1-220ENST00000487932 CIB2O75838 187 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 CCDC89Q8N998 374 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 AZI2Q9H6S1 392 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 TBC1D7Q9P0N9 293 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 JAKMIP2Q96AA8 810 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 SNAPC4Q5SXM2 1469 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 GPR162Q16538 588 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 CWF19L2Q2TBE0 894 aaKnown RBP17.19■□□□□ 0.34
PKD1-220ENST00000487932 TTC6Q86TZ1 520 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 CCDC125Q86Z20 511 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 VPS18Q9P253 973 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 DAPK1P53355 1430 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 IDI1Q13907 227 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 CEP85LQ5SZL2 805 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 RIOK1Q9BRS2 568 aaKnown RBP17.19■□□□□ 0.34
PKD1-220ENST00000487932 FAM135AQ9P2D6 1515 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 VIMP08670 466 aaKnown RBP17.19■□□□□ 0.34
PKD1-220ENST00000487932 CCDC141Q6ZP82 1450 aa17.19■□□□□ 0.34
PKD1-220ENST00000487932 SMCR8Q8TEV9 937 aaPredicted RBP17.18■□□□□ 0.34
PKD1-220ENST00000487932 MAPK8IP1Q9UQF2 711 aa17.18■□□□□ 0.34
PKD1-220ENST00000487932 PPME1Q9Y570 386 aa17.18■□□□□ 0.34
PKD1-220ENST00000487932 MBD4O95243 580 aa17.18■□□□□ 0.34
PKD1-220ENST00000487932 BSPRYQ5W0U4 402 aa17.18■□□□□ 0.34
PKD1-220ENST00000487932 MED10Q9BTT4 135 aa17.18■□□□□ 0.34
PKD1-220ENST00000487932 GTPBP4Q9BZE4 634 aaKnown RBP17.18■□□□□ 0.34
PKD1-220ENST00000487932 SAMD15Q9P1V8 674 aa17.18■□□□□ 0.34
PKD1-220ENST00000487932 EHBP1L1Q8N3D4 1523 aa17.18■□□□□ 0.34
PKD1-220ENST00000487932 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.18■□□□□ 0.344e-6■■■□□ 16.5
PKD1-220ENST00000487932 STIM2Q9P246 746 aa17.18■□□□□ 0.34
PKD1-220ENST00000487932 PRPF6O94906 941 aaKnown RBP17.17■□□□□ 0.34
PKD1-220ENST00000487932 NOC4LQ9BVI4 516 aaKnown RBP17.17■□□□□ 0.34
PKD1-220ENST00000487932 ARHGEF35A5YM69 484 aa17.17■□□□□ 0.34
PKD1-220ENST00000487932 RAD51AP2Q09MP3 1159 aa17.17■□□□□ 0.34
PKD1-220ENST00000487932 INTS8Q75QN2 995 aaKnown RBP17.17■□□□□ 0.34
PKD1-220ENST00000487932 PAGR1Q9BTK6 254 aa17.17■□□□□ 0.34
PKD1-220ENST00000487932 LIN9Q5TKA1 542 aa17.17■□□□□ 0.34
PKD1-220ENST00000487932 CCNL1Q9UK58 526 aaPredicted RBP17.17■□□□□ 0.34
PKD1-220ENST00000487932 TXKP42681 527 aa17.17■□□□□ 0.34
PKD1-220ENST00000487932 SF3A3Q12874 501 aaKnown RBP eCLIP17.17■□□□□ 0.348e-7■■■■■ 37.8
PKD1-220ENST00000487932 NSMFQ6X4W1 530 aa17.17■□□□□ 0.34
PKD1-220ENST00000487932 METTL13Q8N6R0 699 aa17.17■□□□□ 0.34
PKD1-220ENST00000487932 STMN2Q93045 179 aa17.17■□□□□ 0.34
PKD1-220ENST00000487932 ZBED4O75132 1171 aa17.16■□□□□ 0.34
PKD1-220ENST00000487932 KSR2Q6VAB6 950 aa17.16■□□□□ 0.34
PKD1-220ENST00000487932 NPHP3Q7Z494 1330 aa17.16■□□□□ 0.34
PKD1-220ENST00000487932 PDE4DQ08499 809 aa17.16■□□□□ 0.34
PKD1-220ENST00000487932 SEPT6Q14141 434 aa17.16■□□□□ 0.34
PKD1-220ENST00000487932 GPR161Q8N6U8 529 aaKnown RBP17.16■□□□□ 0.34
PKD1-220ENST00000487932 NKIRAS1Q9NYS0 192 aa17.16■□□□□ 0.34
PKD1-220ENST00000487932 HPDP32754 393 aaPredicted RBP17.16■□□□□ 0.34
PKD1-220ENST00000487932 GKAP1Q5VSY0 366 aaPredicted RBP17.16■□□□□ 0.34
PKD1-220ENST00000487932 CDAN1Q8IWY9 1227 aa17.16■□□□□ 0.34
PKD1-220ENST00000487932 TRIM31Q9BZY9 425 aa17.16■□□□□ 0.34
PKD1-220ENST00000487932 FAM184BQ9ULE4 1060 aa17.16■□□□□ 0.34
PKD1-220ENST00000487932 ARHGEF11O15085 1522 aa17.16■□□□□ 0.34
PKD1-220ENST00000487932 TSTA3Q13630 321 aaPredicted RBP17.16■□□□□ 0.34
PKD1-220ENST00000487932 PIK3AP1Q6ZUJ8 805 aa17.16■□□□□ 0.34
PKD1-220ENST00000487932 ANKFY1Q9P2R3 1169 aa17.16■□□□□ 0.34
PKD1-220ENST00000487932 SDCCAG8Q86SQ7 713 aaPredicted RBP17.15■□□□□ 0.34
PKD1-220ENST00000487932 RBM28Q9NW13 759 aaKnown RBP17.15■□□□□ 0.34
PKD1-220ENST00000487932 H0YIN7 160 aa17.15■□□□□ 0.34
PKD1-220ENST00000487932 IRX3P78415 501 aaPredicted RBP17.15■□□□□ 0.34
PKD1-220ENST00000487932 SARNPP82979 210 aaKnown RBP17.15■□□□□ 0.34
PKD1-220ENST00000487932 ARMT1Q9H993 441 aa17.15■□□□□ 0.34
PKD1-220ENST00000487932 IFNKQ9P0W0 207 aa17.15■□□□□ 0.34
PKD1-220ENST00000487932 CD19P15391 556 aa17.15■□□□□ 0.34
PKD1-220ENST00000487932 TNNC1P63316 161 aa17.15■□□□□ 0.34
PKD1-220ENST00000487932 AKAP4Q5JQC9 854 aa17.15■□□□□ 0.34
PKD1-220ENST00000487932 CALUO43852 315 aaPredicted RBP17.15■□□□□ 0.34
PKD1-220ENST00000487932 BTG4Q9NY30 223 aa17.15■□□□□ 0.34
PKD1-220ENST00000487932 TROQ12816 1431 aaPredicted RBP17.15■□□□□ 0.34
PKD1-220ENST00000487932 DNM2P50570 870 aa17.15■□□□□ 0.34
PKD1-220ENST00000487932 UVSSAQ2YD98 709 aa17.15■□□□□ 0.34
PKD1-220ENST00000487932 ESYT1Q9BSJ8 1104 aa17.15■□□□□ 0.34
PKD1-220ENST00000487932 LUC7L2Q9Y383 392 aaKnown RBP17.15■□□□□ 0.34
PKD1-220ENST00000487932 ITKQ08881 620 aa17.15■□□□□ 0.34
PKD1-220ENST00000487932 CSRNP2Q9H175 543 aa17.15■□□□□ 0.34
PKD1-220ENST00000487932 GGA1Q9UJY5 639 aa17.15■□□□□ 0.34
PKD1-220ENST00000487932 HECW1Q76N89 1606 aa17.14■□□□□ 0.34
PKD1-220ENST00000487932 CAPN2P17655 700 aa17.14■□□□□ 0.33
PKD1-220ENST00000487932 NOC2LQ9Y3T9 749 aaKnown RBP17.14■□□□□ 0.33
PKD1-220ENST00000487932 CARD10Q9BWT7 1032 aa17.14■□□□□ 0.33
PKD1-220ENST00000487932 VPS16Q9H269 839 aa17.14■□□□□ 0.33
PKD1-220ENST00000487932 FEZ2Q9UHY8 353 aaPredicted RBP17.14■□□□□ 0.33
PKD1-220ENST00000487932 CCDC122Q5T0U0 273 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms