RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 SIRT2Q8IXJ6 389 aa11.41□□□□□ -0.58
LCN2-205ENST00000487719 JMYQ8N9B5 988 aa11.41□□□□□ -0.58
LCN2-205ENST00000487719 CRBNQ96SW2 442 aa11.41□□□□□ -0.58
LCN2-205ENST00000487719 SCAF8Q9UPN6 1271 aaKnown RBP11.41□□□□□ -0.58
LCN2-205ENST00000487719 DAGLAQ9Y4D2 1042 aa11.41□□□□□ -0.58
LCN2-205ENST00000487719 MROH7-TTC4A0A0A0MT08 1334 aa11.4□□□□□ -0.58
LCN2-205ENST00000487719 MAP4K4O95819 1239 aaPredicted RBP11.4□□□□□ -0.58
LCN2-205ENST00000487719 MAP2K2P36507 400 aa11.4□□□□□ -0.58
LCN2-205ENST00000487719 MAP3K12Q12852 859 aa11.4□□□□□ -0.58
LCN2-205ENST00000487719 GRIK5Q16478 980 aa11.4□□□□□ -0.58
LCN2-205ENST00000487719 DCAF15Q66K64 600 aa11.4□□□□□ -0.58
LCN2-205ENST00000487719 NAA16Q6N069 864 aaPredicted RBP11.4□□□□□ -0.58
LCN2-205ENST00000487719 CYP4F22Q6NT55 531 aa11.4□□□□□ -0.58
LCN2-205ENST00000487719 FAM83AQ86UY5 434 aa11.4□□□□□ -0.58
LCN2-205ENST00000487719 CERS3Q8IU89 383 aa11.4□□□□□ -0.58
LCN2-205ENST00000487719 SNRKQ9NRH2 765 aa11.4□□□□□ -0.58
LCN2-205ENST00000487719 USP40Q9NVE5 1235 aa11.4□□□□□ -0.58
LCN2-205ENST00000487719 ANGEL1Q9UNK9 670 aaKnown RBP11.4□□□□□ -0.58
LCN2-205ENST00000487719 PCDHAC2Q9Y5I4 1007 aa11.4□□□□□ -0.58
LCN2-205ENST00000487719 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.4□□□□□ -0.58
LCN2-205ENST00000487719 RPAP1Q9BWH6 1393 aaPredicted RBP11.4□□□□□ -0.59
LCN2-205ENST00000487719 UNCXA6NJT0 531 aa11.39□□□□□ -0.59
LCN2-205ENST00000487719 IDH1O75874 414 aaKnown RBP11.39□□□□□ -0.59
LCN2-205ENST00000487719 MECOMQ03112 1051 aa11.39□□□□□ -0.59
LCN2-205ENST00000487719 PRKG1Q13976 671 aa11.39□□□□□ -0.59
LCN2-205ENST00000487719 PRAMEF18Q5VWM3 479 aa11.39□□□□□ -0.59
LCN2-205ENST00000487719 APOBEC3HQ6NTF7 200 aaKnown RBP11.39□□□□□ -0.59
LCN2-205ENST00000487719 PI16Q6UXB8 463 aa11.39□□□□□ -0.59
LCN2-205ENST00000487719 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
LCN2-205ENST00000487719 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.39□□□□□ -0.59
LCN2-205ENST00000487719 DCTPP1Q9H773 170 aa11.39□□□□□ -0.59
LCN2-205ENST00000487719 TLR7Q9NYK1 1049 aaKnown RBP11.39□□□□□ -0.59
LCN2-205ENST00000487719 SUPT16HQ9Y5B9 1047 aaKnown RBP11.39□□□□□ -0.59
LCN2-205ENST00000487719 GAKO14976 1311 aa11.38□□□□□ -0.59
LCN2-205ENST00000487719 ATAD5Q96QE3 1844 aa11.38□□□□□ -0.59
LCN2-205ENST00000487719 BTDP43251 543 aa11.38□□□□□ -0.59
LCN2-205ENST00000487719 ZAP70P43403 619 aa11.38□□□□□ -0.59
LCN2-205ENST00000487719 CDC42EP5Q6NZY7 148 aa11.38□□□□□ -0.59
LCN2-205ENST00000487719 DLK2Q6UY11 383 aa11.38□□□□□ -0.59
LCN2-205ENST00000487719 TBC1D9Q6ZT07 1266 aa11.38□□□□□ -0.59
LCN2-205ENST00000487719 ZSCAN29Q8IWY8 852 aaPredicted RBP11.38□□□□□ -0.59
LCN2-205ENST00000487719 NSUN4Q96CB9 384 aaKnown RBP11.38□□□□□ -0.59
LCN2-205ENST00000487719 GCC1Q96CN9 775 aa11.38□□□□□ -0.59
LCN2-205ENST00000487719 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
LCN2-205ENST00000487719 DNAJC2Q99543 621 aaKnown RBP11.38□□□□□ -0.59
LCN2-205ENST00000487719 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.38□□□□□ -0.59
LCN2-205ENST00000487719 RWDD1Q9H446 243 aaPredicted RBP11.38□□□□□ -0.59
LCN2-205ENST00000487719 CSADQ9Y600 493 aa11.38□□□□□ -0.59
LCN2-205ENST00000487719 LAMB1P07942 1786 aa11.38□□□□□ -0.59
LCN2-205ENST00000487719 NAV1Q8NEY1 1877 aa11.38□□□□□ -0.59
LCN2-205ENST00000487719 UBE2Q2LH0YL09 131 aa11.37□□□□□ -0.59
LCN2-205ENST00000487719 CA12O43570 354 aa11.37□□□□□ -0.59
LCN2-205ENST00000487719 CACNB3P54284 484 aa11.37□□□□□ -0.59
LCN2-205ENST00000487719 NBPF12Q5TAG4 269 aaPredicted RBP11.37□□□□□ -0.59
LCN2-205ENST00000487719 ANKRD13AQ8IZ07 590 aa11.37□□□□□ -0.59
LCN2-205ENST00000487719 FAM151AQ8WW52 585 aa11.37□□□□□ -0.59
LCN2-205ENST00000487719 TMEM39BQ9GZU3 492 aa11.37□□□□□ -0.59
LCN2-205ENST00000487719 DOCK1Q14185 1865 aa11.36□□□□□ -0.59
LCN2-205ENST00000487719 GPR75-ASB3A0A0A6YYF3 556 aa11.36□□□□□ -0.59
LCN2-205ENST00000487719 ERC2O15083 957 aa11.36□□□□□ -0.59
LCN2-205ENST00000487719 ENTPD3O75355 529 aa11.36□□□□□ -0.59
LCN2-205ENST00000487719 CYP2E1P05181 493 aaPredicted RBP11.36□□□□□ -0.59
LCN2-205ENST00000487719 SLC10A3P09131 477 aa11.36□□□□□ -0.59
LCN2-205ENST00000487719 HSPA1AP0DMV8 641 aaKnown RBP11.36□□□□□ -0.59
LCN2-205ENST00000487719 HSPA1BP0DMV9 641 aaKnown RBP11.36□□□□□ -0.59
LCN2-205ENST00000487719 TCP10Q12799 353 aa11.36□□□□□ -0.59
LCN2-205ENST00000487719 LRRFIP1Q32MZ4 808 aaKnown RBP11.36□□□□□ -0.59
LCN2-205ENST00000487719 TEX11Q8IYF3 940 aa11.36□□□□□ -0.59
LCN2-205ENST00000487719 SLC10A4Q96EP9 437 aa11.36□□□□□ -0.59
LCN2-205ENST00000487719 IDI2Q9BXS1 227 aa11.36□□□□□ -0.59
LCN2-205ENST00000487719 ECHDC1Q9NTX5 307 aa11.36□□□□□ -0.59
LCN2-205ENST00000487719 PCDHB15Q9Y5E8 787 aa11.36□□□□□ -0.59
LCN2-205ENST00000487719 AOX1Q06278 1338 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 GOLIM4O00461 696 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 ATP5JP18859 108 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 CYP7A1P22680 504 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 RGS3P49796 1198 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 SREBF2Q12772 1141 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 PICALMQ13492 652 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 HDAC1Q13547 482 aaPredicted RBP11.35□□□□□ -0.59
LCN2-205ENST00000487719 MAP3K11Q16584 847 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 ZSCAN25Q6NSZ9 544 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 CSRNP1Q96S65 589 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 TRIM34Q9BYJ4 488 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 ZNF341Q9BYN7 854 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 PAG1Q9NWQ8 432 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 AATFQ9NY61 560 aaKnown RBP eCLIP11.35□□□□□ -0.59
LCN2-205ENST00000487719 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.35□□□□□ -0.59
LCN2-205ENST00000487719 CASP8AP2Q9UKL3 1982 aa11.35□□□□□ -0.59
LCN2-205ENST00000487719 BAZ2AQ9UIF9 1905 aaKnown RBP11.35□□□□□ -0.59
LCN2-205ENST00000487719 SSC5DA1L4H1 1573 aa11.34□□□□□ -0.59
LCN2-205ENST00000487719 SMARCA5O60264 1052 aaPredicted RBP11.34□□□□□ -0.59
LCN2-205ENST00000487719 AOC2O75106 756 aa11.34□□□□□ -0.59
LCN2-205ENST00000487719 NPM3O75607 178 aaKnown RBP11.34□□□□□ -0.59
LCN2-205ENST00000487719 ZBTB48P10074 688 aaPredicted RBP11.34□□□□□ -0.59
LCN2-205ENST00000487719 CTCFP49711 727 aaPredicted RBP11.34□□□□□ -0.59
LCN2-205ENST00000487719 MOB2Q70IA6 237 aa11.34□□□□□ -0.59
LCN2-205ENST00000487719 RASAL3Q86YV0 1011 aa11.34□□□□□ -0.59
LCN2-205ENST00000487719 MAGEB6Q8N7X4 407 aa11.34□□□□□ -0.59
LCN2-205ENST00000487719 TEPSINQ96N21 525 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms