RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TCF12Q99081 682 aa6.9□□□□□ -1.3
HMGB1P36-201ENST00000487709 ZFYVE1Q9HBF4 777 aa6.9□□□□□ -1.3
HMGB1P36-201ENST00000487709 CCDC87Q9NVE4 849 aa6.9□□□□□ -1.3
HMGB1P36-201ENST00000487709 DBX1A6NMT0 343 aa6.89□□□□□ -1.31
HMGB1P36-201ENST00000487709 AOC2O75106 756 aa6.89□□□□□ -1.31
HMGB1P36-201ENST00000487709 FARP2O94887 1054 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P36-201ENST00000487709 FAM13AO94988 1023 aa6.89□□□□□ -1.31
HMGB1P36-201ENST00000487709 PDIA4P13667 645 aaKnown RBP6.89□□□□□ -1.31
HMGB1P36-201ENST00000487709 CD96P40200 585 aa6.89□□□□□ -1.31
HMGB1P36-201ENST00000487709 PKN1Q16512 942 aa6.89□□□□□ -1.31
HMGB1P36-201ENST00000487709 CYP27C1Q4G0S4 372 aa6.89□□□□□ -1.31
HMGB1P36-201ENST00000487709 GJD3Q8N144 294 aa6.89□□□□□ -1.31
HMGB1P36-201ENST00000487709 DDX54Q8TDD1 881 aaKnown RBP6.89□□□□□ -1.31
HMGB1P36-201ENST00000487709 WDR18Q9BV38 432 aa6.89□□□□□ -1.31
HMGB1P36-201ENST00000487709 GSX1Q9H4S2 264 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P36-201ENST00000487709 RNASE1P07998 156 aaKnown RBP6.88□□□□□ -1.31
HMGB1P36-201ENST00000487709 FAM87AP0C7U9 286 aa6.88□□□□□ -1.31
HMGB1P36-201ENST00000487709 CD8BP10966 210 aa6.88□□□□□ -1.31
HMGB1P36-201ENST00000487709 NETO1Q8TDF5 533 aa6.88□□□□□ -1.31
HMGB1P36-201ENST00000487709 MISP3Q96FF7 219 aa6.88□□□□□ -1.31
HMGB1P36-201ENST00000487709 ANO2Q9NQ90 1003 aa6.88□□□□□ -1.31
HMGB1P36-201ENST00000487709 ADAMTS6Q9UKP5 1117 aa6.88□□□□□ -1.31
HMGB1P36-201ENST00000487709 PPP1R9AQ9ULJ8 1098 aa6.88□□□□□ -1.31
HMGB1P36-201ENST00000487709 B3GALT4O96024 378 aa6.87□□□□□ -1.31
HMGB1P36-201ENST00000487709 NPR3P17342 541 aa6.87□□□□□ -1.31
HMGB1P36-201ENST00000487709 FUT4P22083 530 aa6.87□□□□□ -1.31
HMGB1P36-201ENST00000487709 SPOCD1Q6ZMY3 1216 aa6.87□□□□□ -1.31
HMGB1P36-201ENST00000487709 ATG4DQ86TL0 474 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P36-201ENST00000487709 KSR1Q8IVT5 923 aa6.87□□□□□ -1.31
HMGB1P36-201ENST00000487709 GALNT12Q8IXK2 581 aa6.87□□□□□ -1.31
HMGB1P36-201ENST00000487709 GLIS3Q8NEA6 775 aa6.87□□□□□ -1.31
HMGB1P36-201ENST00000487709 PIDD1Q9HB75 910 aa6.87□□□□□ -1.31
HMGB1P36-201ENST00000487709 MBNL3Q9NUK0 354 aaKnown RBP6.87□□□□□ -1.31
HMGB1P36-201ENST00000487709 ABL1P00519 1130 aa6.86□□□□□ -1.31
HMGB1P36-201ENST00000487709 SSFA2P28290 1259 aa6.86□□□□□ -1.31
HMGB1P36-201ENST00000487709 FBLN7Q53RD9 439 aa6.86□□□□□ -1.31
HMGB1P36-201ENST00000487709 USPL1Q5W0Q7 1092 aa6.86□□□□□ -1.31
HMGB1P36-201ENST00000487709 LRRN4CLQ8ND94 238 aa6.86□□□□□ -1.31
HMGB1P36-201ENST00000487709 ZNF576Q9H609 170 aa6.86□□□□□ -1.31
HMGB1P36-201ENST00000487709 U3KQE9 123 aa6.86□□□□□ -1.31
HMGB1P36-201ENST00000487709 TMPRSS2O15393 492 aa6.85□□□□□ -1.31
HMGB1P36-201ENST00000487709 LIG1P18858 919 aa6.85□□□□□ -1.31
HMGB1P36-201ENST00000487709 ZNF211Q13398 564 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P36-201ENST00000487709 PI4K2BQ8TCG2 481 aa6.85□□□□□ -1.31
HMGB1P36-201ENST00000487709 ZC3H12CQ9C0D7 883 aaKnown RBP6.85□□□□□ -1.31
HMGB1P36-201ENST00000487709 B4GALNT3Q6L9W6 998 aa6.84□□□□□ -1.31
HMGB1P36-201ENST00000487709 ARHGAP27Q6ZUM4 889 aa6.84□□□□□ -1.31
HMGB1P36-201ENST00000487709 WDR89Q96FK6 387 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P36-201ENST00000487709 SLC38A3Q99624 504 aa6.84□□□□□ -1.31
HMGB1P36-201ENST00000487709 KRTAP4-2Q9BYR5 136 aa6.84□□□□□ -1.31
HMGB1P36-201ENST00000487709 EHD4Q9H223 541 aa6.84□□□□□ -1.31
HMGB1P36-201ENST00000487709 USTQ9Y2C2 406 aa6.84□□□□□ -1.31
HMGB1P36-201ENST00000487709 SF3B2Q13435 895 aaKnown RBP6.83□□□□□ -1.32
HMGB1P36-201ENST00000487709 TMEM40Q8WWA1 233 aa6.83□□□□□ -1.32
HMGB1P36-201ENST00000487709 CCDC86Q9H6F5 360 aaKnown RBP6.83□□□□□ -1.32
HMGB1P36-201ENST00000487709 MTMR7Q9Y216 660 aa6.83□□□□□ -1.32
HMGB1P36-201ENST00000487709 TMEM88BA6NKF7 163 aa6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 PATL2C9JE40 543 aaKnown RBP6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 RNGTTO60942 597 aaKnown RBP6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 LEFTY1O75610 366 aa6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 ITIH2P19823 946 aa6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 ZNF157P51786 506 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 FKBP4Q02790 459 aaKnown RBP eCLIP6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 PRKCQQ04759 706 aa6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 AP3B2Q13367 1082 aa6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 IFI16Q16666 785 aaKnown RBP6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 AOC3Q16853 763 aa6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 HRASLS5Q96KN8 279 aa6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 FANCD2OSQ96PS1 177 aa6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 ATXN3LQ9H3M9 355 aa6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 NPHS2Q9NP85 383 aa6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 CRIM1Q9NZV1 1036 aa6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 VAV3Q9UKW4 847 aa6.82□□□□□ -1.32
HMGB1P36-201ENST00000487709 HCLS1P14317 486 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P36-201ENST00000487709 ITPKAP23677 461 aa6.81□□□□□ -1.32
HMGB1P36-201ENST00000487709 ID3Q02535 119 aa6.81□□□□□ -1.32
HMGB1P36-201ENST00000487709 KIAA0319Q5VV43 1072 aa6.81□□□□□ -1.32
HMGB1P36-201ENST00000487709 SMYD4Q8IYR2 804 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P36-201ENST00000487709 RETREG2Q8NC44 543 aa6.81□□□□□ -1.32
HMGB1P36-201ENST00000487709 CEACAM5P06731 702 aa6.8□□□□□ -1.32
HMGB1P36-201ENST00000487709 TTLL4Q14679 1199 aa6.8□□□□□ -1.32
HMGB1P36-201ENST00000487709 PRDM7Q9NQW5 492 aa6.8□□□□□ -1.32
HMGB1P36-201ENST00000487709 SYNGAP1Q96PV0 1343 aa6.79□□□□□ -1.32
HMGB1P36-201ENST00000487709 LRRC10BA6NIK2 292 aa6.79□□□□□ -1.32
HMGB1P36-201ENST00000487709 ZNF862O60290 1169 aa6.79□□□□□ -1.32
HMGB1P36-201ENST00000487709 SLFN14P0C7P3 912 aa6.79□□□□□ -1.32
HMGB1P36-201ENST00000487709 OXCT1P55809 520 aa6.79□□□□□ -1.32
HMGB1P36-201ENST00000487709 ORC1Q13415 861 aa6.79□□□□□ -1.32
HMGB1P36-201ENST00000487709 ANGEL2Q5VTE6 544 aaKnown RBP6.79□□□□□ -1.32
HMGB1P36-201ENST00000487709 ABCB6Q9NP58 842 aa6.79□□□□□ -1.32
HMGB1P36-201ENST00000487709 DISC1Q9NRI5 854 aa6.79□□□□□ -1.32
HMGB1P36-201ENST00000487709 ZBTB7CA1YPR0 619 aa6.78□□□□□ -1.32
HMGB1P36-201ENST00000487709 CARNS1A5YM72 827 aa6.78□□□□□ -1.32
HMGB1P36-201ENST00000487709 FAM84AQ96KN4 292 aa6.78□□□□□ -1.32
HMGB1P36-201ENST00000487709 DUSP23Q9BVJ7 150 aa6.78□□□□□ -1.32
HMGB1P36-201ENST00000487709 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.78□□□□□ -1.32
HMGB1P36-201ENST00000487709 BRPF3Q9ULD4 1205 aa6.78□□□□□ -1.32
HMGB1P36-201ENST00000487709 PLAGL2Q9UPG8 496 aa6.78□□□□□ -1.32
HMGB1P36-201ENST00000487709 TMEM265A0A087WTH1 108 aa6.77□□□□□ -1.33
HMGB1P36-201ENST00000487709 FAAP100Q0VG06 881 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms