RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 TCP10L2B9ZVM9 353 aa12.6□□□□□ -0.39
RNF220-215ENST00000487332 UBE2Q2LH0YL09 131 aa12.6□□□□□ -0.39
RNF220-215ENST00000487332 NPM3O75607 178 aaKnown RBP12.6□□□□□ -0.39
RNF220-215ENST00000487332 ZBTB48P10074 688 aaPredicted RBP12.6□□□□□ -0.39
RNF220-215ENST00000487332 GSTO1P78417 241 aa12.6□□□□□ -0.39
RNF220-215ENST00000487332 GRM1Q13255 1194 aa12.6□□□□□ -0.39
RNF220-215ENST00000487332 DIXDC1Q155Q3 683 aa12.6□□□□□ -0.39
RNF220-215ENST00000487332 TTC39AQ5SRH9 613 aa12.6□□□□□ -0.39
RNF220-215ENST00000487332 NBPF12Q5TAG4 269 aaPredicted RBP12.6□□□□□ -0.39
RNF220-215ENST00000487332 C20orf194Q5TEA3 1177 aa12.6□□□□□ -0.39
RNF220-215ENST00000487332 MOB2Q70IA6 237 aa12.6□□□□□ -0.39
RNF220-215ENST00000487332 ERICH6Q7L0X2 663 aa12.6□□□□□ -0.39
RNF220-215ENST00000487332 SIRT2Q8IXJ6 389 aa12.6□□□□□ -0.39
RNF220-215ENST00000487332 ANKRD13AQ8IZ07 590 aa12.6□□□□□ -0.39
RNF220-215ENST00000487332 FAM151AQ8WW52 585 aa12.6□□□□□ -0.39
RNF220-215ENST00000487332 RRP1P56182 461 aaKnown RBP12.59□□□□□ -0.39
RNF220-215ENST00000487332 KIF23Q02241 960 aaPredicted RBP12.59□□□□□ -0.39
RNF220-215ENST00000487332 CDC42EP5Q6NZY7 148 aa12.59□□□□□ -0.39
RNF220-215ENST00000487332 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.59□□□□□ -0.39
RNF220-215ENST00000487332 RHPN1Q8TCX5 695 aa12.59□□□□□ -0.39
RNF220-215ENST00000487332 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.59□□□□□ -0.39
RNF220-215ENST00000487332 NSUN4Q96CB9 384 aaKnown RBP12.59□□□□□ -0.39
RNF220-215ENST00000487332 EAF2Q96CJ1 260 aaPredicted RBP12.59□□□□□ -0.39
RNF220-215ENST00000487332 TMEM39BQ9GZU3 492 aa12.59□□□□□ -0.39
RNF220-215ENST00000487332 ABCF2Q9UG63 623 aa12.59□□□□□ -0.39
RNF220-215ENST00000487332 EXOC6BQ9Y2D4 811 aa12.59□□□□□ -0.39
RNF220-215ENST00000487332 ATRNL1Q5VV63 1379 aa12.58□□□□□ -0.4
RNF220-215ENST00000487332 GPR75-ASB3A0A0A6YYF3 556 aa12.58□□□□□ -0.4
RNF220-215ENST00000487332 ENTPD3O75355 529 aa12.58□□□□□ -0.4
RNF220-215ENST00000487332 USP2O75604 605 aaPredicted RBP12.58□□□□□ -0.4
RNF220-215ENST00000487332 LDHCP07864 332 aa12.58□□□□□ -0.4
RNF220-215ENST00000487332 MECOMQ03112 1051 aa12.58□□□□□ -0.4
RNF220-215ENST00000487332 SREBF2Q12772 1141 aa12.58□□□□□ -0.4
RNF220-215ENST00000487332 SPRYD7Q5W111 196 aa12.58□□□□□ -0.4
RNF220-215ENST00000487332 DCAF15Q66K64 600 aa12.58□□□□□ -0.4
RNF220-215ENST00000487332 PI16Q6UXB8 463 aa12.58□□□□□ -0.4
RNF220-215ENST00000487332 ZNF384Q8TF68 577 aa12.58□□□□□ -0.4
RNF220-215ENST00000487332 ZIC5Q96T25 663 aa12.58□□□□□ -0.4
RNF220-215ENST00000487332 CFHR5Q9BXR6 569 aa12.58□□□□□ -0.4
RNF220-215ENST00000487332 DOCK2Q92608 1830 aa12.58□□□□□ -0.4
RNF220-215ENST00000487332 AKAP11Q9UKA4 1901 aa12.57□□□□□ -0.4
RNF220-215ENST00000487332 TM4SF4P48230 202 aa12.57□□□□□ -0.4
RNF220-215ENST00000487332 CACNB3P54284 484 aa12.57□□□□□ -0.4
RNF220-215ENST00000487332 INHBEP58166 350 aa12.57□□□□□ -0.4
RNF220-215ENST00000487332 NOM1Q5C9Z4 860 aaKnown RBP12.57□□□□□ -0.4
RNF220-215ENST00000487332 COL13A1Q5TAT6 717 aaPredicted RBP12.57□□□□□ -0.4
RNF220-215ENST00000487332 CLASRPQ8N2M8 674 aaKnown RBP12.57□□□□□ -0.4
RNF220-215ENST00000487332 WNK4Q96J92 1243 aa12.57□□□□□ -0.4
RNF220-215ENST00000487332 CSRNP1Q96S65 589 aa12.57□□□□□ -0.4
RNF220-215ENST00000487332 TLR7Q9NYK1 1049 aaKnown RBP12.57□□□□□ -0.4
RNF220-215ENST00000487332 FAM198AQ9UFP1 575 aa12.57□□□□□ -0.4
RNF220-215ENST00000487332 MANSC4A6NHS7 340 aaPredicted RBP12.56□□□□□ -0.4
RNF220-215ENST00000487332 WDHD1O75717 1129 aaPredicted RBP12.56□□□□□ -0.4
RNF220-215ENST00000487332 CYP2E1P05181 493 aaPredicted RBP12.56□□□□□ -0.4
RNF220-215ENST00000487332 BTDP43251 543 aa12.56□□□□□ -0.4
RNF220-215ENST00000487332 LBX1P52954 281 aa12.56□□□□□ -0.4
RNF220-215ENST00000487332 RHBDL3P58872 404 aa12.56□□□□□ -0.4
RNF220-215ENST00000487332 AACSQ86V21 672 aa12.56□□□□□ -0.4
RNF220-215ENST00000487332 CERS3Q8IU89 383 aa12.56□□□□□ -0.4
RNF220-215ENST00000487332 CDAN1Q8IWY9 1227 aa12.56□□□□□ -0.4
RNF220-215ENST00000487332 USP40Q9NVE5 1235 aa12.56□□□□□ -0.4
RNF220-215ENST00000487332 PCNTO95613 3336 aa12.56□□□□□ -0.4
RNF220-215ENST00000487332 MYH2Q9UKX2 1941 aa12.56□□□□□ -0.4
RNF220-215ENST00000487332 TESPA1A2RU30 521 aaPredicted RBP12.55□□□□□ -0.4
RNF220-215ENST00000487332 ZAP70P43403 619 aa12.55□□□□□ -0.4
RNF220-215ENST00000487332 NFIAQ12857 509 aa12.55□□□□□ -0.4
RNF220-215ENST00000487332 AAMPQ13685 434 aa12.55□□□□□ -0.4
RNF220-215ENST00000487332 PRKG1Q13976 671 aa12.55□□□□□ -0.4
RNF220-215ENST00000487332 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.55□□□□□ -0.4
RNF220-215ENST00000487332 SLC10A4Q96EP9 437 aa12.55□□□□□ -0.4
RNF220-215ENST00000487332 ZNF341Q9BYN7 854 aa12.55□□□□□ -0.4
RNF220-215ENST00000487332 CCDC8Q9H0W5 538 aaPredicted RBP12.55□□□□□ -0.4
RNF220-215ENST00000487332 LRP2BPQ9P2M1 347 aa12.55□□□□□ -0.4
RNF220-215ENST00000487332 ZNF112Q9UJU3 913 aa12.55□□□□□ -0.4
RNF220-215ENST00000487332 SPDYE5A6NIY4 337 aa12.54□□□□□ -0.4
RNF220-215ENST00000487332 ALDH1A1P00352 501 aa12.54□□□□□ -0.4
RNF220-215ENST00000487332 PLCG2P16885 1265 aa12.54□□□□□ -0.4
RNF220-215ENST00000487332 PPP4CP60510 307 aa12.54□□□□□ -0.4
RNF220-215ENST00000487332 MAP3K9P80192 1104 aa12.54□□□□□ -0.4
RNF220-215ENST00000487332 MAP3K10Q02779 954 aa12.54□□□□□ -0.4
RNF220-215ENST00000487332 VGLL4Q14135 290 aa12.54□□□□□ -0.4
RNF220-215ENST00000487332 TTF1Q15361 905 aaPredicted RBP12.54□□□□□ -0.4
RNF220-215ENST00000487332 NOL9Q5SY16 702 aaKnown RBP12.54□□□□□ -0.4
RNF220-215ENST00000487332 CLMNQ96JQ2 1002 aa12.54□□□□□ -0.4
RNF220-215ENST00000487332 RNF186Q9NXI6 227 aa12.54□□□□□ -0.4
RNF220-215ENST00000487332 RAI14Q9P0K7 980 aa12.54□□□□□ -0.4
RNF220-215ENST00000487332 FZD1Q9UP38 647 aa12.54□□□□□ -0.4
RNF220-215ENST00000487332 CSADQ9Y600 493 aa12.54□□□□□ -0.4
RNF220-215ENST00000487332 BAG3O95817 575 aa12.53□□□□□ -0.4
RNF220-215ENST00000487332 IFIT2P09913 472 aaKnown RBP12.53□□□□□ -0.4
RNF220-215ENST00000487332 RGS3P49796 1198 aa12.53□□□□□ -0.4
RNF220-215ENST00000487332 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
RNF220-215ENST00000487332 NAA16Q6N069 864 aaPredicted RBP12.53□□□□□ -0.4
RNF220-215ENST00000487332 TBC1D9Q6ZT07 1266 aa12.53□□□□□ -0.4
RNF220-215ENST00000487332 WRNIP1Q96S55 665 aa12.53□□□□□ -0.4
RNF220-215ENST00000487332 NOL10Q9BSC4 688 aaKnown RBP12.53□□□□□ -0.4
RNF220-215ENST00000487332 LRRCC1Q9C099 1032 aa12.53□□□□□ -0.4
RNF220-215ENST00000487332 DCTPP1Q9H773 170 aa12.53□□□□□ -0.4
RNF220-215ENST00000487332 IL1RAPL2Q9NP60 686 aa12.53□□□□□ -0.4
RNF220-215ENST00000487332 SNCAIPQ9Y6H5 919 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms