RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PIK3C2AO00443 1686 aa14.25□□□□□ -0.13
HSPG2-211ENST00000486901 ABL1P00519 1130 aa14.25□□□□□ -0.13
HSPG2-211ENST00000486901 GPTP24298 496 aa14.25□□□□□ -0.13
HSPG2-211ENST00000486901 PPP2R3AQ06190 1150 aa14.25□□□□□ -0.13
HSPG2-211ENST00000486901 SMC1AQ14683 1233 aaKnown RBP14.25□□□□□ -0.13
HSPG2-211ENST00000486901 EEF2KMTQ96G04 330 aa14.25□□□□□ -0.13
HSPG2-211ENST00000486901 PARD6BQ9BYG5 372 aa14.25□□□□□ -0.13
HSPG2-211ENST00000486901 SLC52A2Q9HAB3 445 aa14.25□□□□□ -0.13
HSPG2-211ENST00000486901 NFE2L3Q9Y4A8 694 aa14.25□□□□□ -0.13
HSPG2-211ENST00000486901 N4BP1O75113 896 aaKnown RBP14.24□□□□□ -0.13
HSPG2-211ENST00000486901 METTL16Q86W50 562 aaKnown RBP14.24□□□□□ -0.13
HSPG2-211ENST00000486901 BAG1Q99933 345 aaPredicted RBP14.24□□□□□ -0.13
HSPG2-211ENST00000486901 TADA3O75528 432 aa14.24□□□□□ -0.13
HSPG2-211ENST00000486901 PDIA4P13667 645 aaKnown RBP14.24□□□□□ -0.13
HSPG2-211ENST00000486901 CYP2C19P33261 490 aa14.24□□□□□ -0.13
HSPG2-211ENST00000486901 PPARDQ03181 441 aa14.24□□□□□ -0.13
HSPG2-211ENST00000486901 CEP126Q9P2H0 1117 aa14.24□□□□□ -0.13
HSPG2-211ENST00000486901 FOXP2O15409 715 aa14.24□□□□□ -0.13
HSPG2-211ENST00000486901 GUCY1A2P33402 732 aa14.24□□□□□ -0.13
HSPG2-211ENST00000486901 RAD51AP2Q09MP3 1159 aa14.24□□□□□ -0.13
HSPG2-211ENST00000486901 CYB5R4Q7L1T6 521 aa14.24□□□□□ -0.13
HSPG2-211ENST00000486901 MRPL44Q9H9J2 332 aaKnown RBP14.24□□□□□ -0.13
HSPG2-211ENST00000486901 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.24□□□□□ -0.13
HSPG2-211ENST00000486901 PLEKHG1Q9ULL1 1385 aa14.24□□□□□ -0.13
HSPG2-211ENST00000486901 DIP2BQ9P265 1576 aa14.24□□□□□ -0.13
HSPG2-211ENST00000486901 SALL1Q9NSC2 1324 aa14.24□□□□□ -0.13
HSPG2-211ENST00000486901 BTBD18B2RXH4 712 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 POLR2DO15514 142 aaKnown RBP14.23□□□□□ -0.13
HSPG2-211ENST00000486901 TEX33O43247 280 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 TBC1D8O95759 1140 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 METAP2P50579 478 aaKnown RBP eCLIP14.23□□□□□ -0.132e-7■■■□□ 17.9
HSPG2-211ENST00000486901 CABP4P57796 275 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 CALCOCO1Q9P1Z2 691 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 IMPACTQ9P2X3 320 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 GPAA1O43292 621 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 TNNT3P45378 269 aaPredicted RBP14.23□□□□□ -0.13
HSPG2-211ENST00000486901 ARHGEF25Q86VW2 580 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 CCDC191Q8NCU4 936 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 NUP133Q8WUM0 1156 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 ZNF274Q96GC6 653 aaPredicted RBP14.23□□□□□ -0.13
HSPG2-211ENST00000486901 SEC31BQ9NQW1 1179 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 PSDA5PKW4 1024 aaPredicted RBP14.23□□□□□ -0.13
HSPG2-211ENST00000486901 SNRPA1P09661 255 aaKnown RBP14.23□□□□□ -0.13
HSPG2-211ENST00000486901 CTDSPL2Q05D32 466 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 XAGE2Q96GT9 111 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 DSCC1Q9BVC3 393 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 VPS18Q9P253 973 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 TFR2Q9UP52 801 aa14.23□□□□□ -0.13
HSPG2-211ENST00000486901 NBPF26B4DH59 902 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 KIF2AO00139 706 aaPredicted RBP14.22□□□□□ -0.13
HSPG2-211ENST00000486901 FOXO4P98177 505 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 TRDNQ13061 729 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 NR5A1Q13285 461 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 NBPF14Q5TI25 921 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 NBPF10Q6P3W6 841 aaKnown RBP14.22□□□□□ -0.13
HSPG2-211ENST00000486901 NBPF15Q8N660 670 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 SERTAD1Q9UHV2 236 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 KCNH3Q9ULD8 1083 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 MAPK8IP1Q9UQF2 711 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 H3BQF6 201 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 PES1O00541 588 aaKnown RBP14.22□□□□□ -0.13
HSPG2-211ENST00000486901 FKBP15Q5T1M5 1219 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 FOXR1Q6PIV2 292 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 TBC1D10CQ8IV04 446 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 HELLSQ9NRZ9 838 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 FMN2Q9NZ56 1722 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 UTYO14607 1347 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 CDC25AP30304 524 aa14.22□□□□□ -0.13
HSPG2-211ENST00000486901 CC2D1AQ6P1N0 951 aaPredicted RBP14.22□□□□□ -0.13
HSPG2-211ENST00000486901 CMA1P23946 247 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 SLC9C2Q5TAH2 1124 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 KCNH5Q8NCM2 988 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 NCOA7Q8NI08 942 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 PDE11AQ9HCR9 933 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 POLR3EQ9NVU0 708 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 DIP2AQ14689 1571 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 A0A1W2PQ27 194 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 A0A1W2PQ64 194 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 A0A1W2PQD8 194 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 FAM205CA6NFA0 338 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 CCT6AP40227 531 aaKnown RBP14.21□□□□□ -0.13
HSPG2-211ENST00000486901 CCDC158Q5M9N0 1113 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 CCDC102BQ68D86 513 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 VSTM4Q8IW00 320 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 ARFGAP3Q9NP61 516 aa14.21□□□□□ -0.13
HSPG2-211ENST00000486901 IQSEC3Q9UPP2 1182 aaPredicted RBP14.21□□□□□ -0.13
HSPG2-211ENST00000486901 SMIM22K7EJ46 135 aa14.21□□□□□ -0.14
HSPG2-211ENST00000486901 ZRANB2O95218 330 aaKnown RBP eCLIP14.21□□□□□ -0.14
HSPG2-211ENST00000486901 SLC39A14Q15043 492 aa14.21□□□□□ -0.14
HSPG2-211ENST00000486901 CCDC57Q2TAC2 916 aa14.21□□□□□ -0.14
HSPG2-211ENST00000486901 LRRFIP1Q32MZ4 808 aaKnown RBP14.21□□□□□ -0.14
HSPG2-211ENST00000486901 CDC5LQ99459 802 aaKnown RBP14.21□□□□□ -0.14
HSPG2-211ENST00000486901 SH3TC1Q8TE82 1336 aa14.2□□□□□ -0.14
HSPG2-211ENST00000486901 EYA2O00167 538 aa14.2□□□□□ -0.14
HSPG2-211ENST00000486901 CYP27B1O15528 508 aa14.2□□□□□ -0.14
HSPG2-211ENST00000486901 TATP17735 454 aaPredicted RBP14.2□□□□□ -0.14
HSPG2-211ENST00000486901 TAF3Q5VWG9 929 aa14.2□□□□□ -0.14
HSPG2-211ENST00000486901 ANKLE2Q86XL3 938 aa14.2□□□□□ -0.14
HSPG2-211ENST00000486901 ZMYND10O75800 440 aa14.2□□□□□ -0.14
HSPG2-211ENST00000486901 YEATS4O95619 227 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms