RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 PPFIBP1Q86W92 1011 aa14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 AIFM3Q96NN9 605 aa14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 COPRSQ9NQ92 184 aa14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 ITSN1Q15811 1721 aa14.15□□□□□ -0.14
SHROOM3-208ENST00000486758 ITGA6P23229 1130 aa14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 MTX1Q13505 466 aa14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 INCENPQ9NQS7 918 aa14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 PPP1R1BQ9UD71 204 aaPredicted RBP14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 CLIC4Q9Y696 253 aa14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 ANKRD26Q9UPS8 1709 aa14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 ZNF202O95125 648 aa14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 CCZ1BP86790 482 aa14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 CCZ1P86791 482 aaPredicted RBP14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 RAD51AP2Q09MP3 1159 aa14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 RESTQ13127 1097 aa14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 IRS4O14654 1257 aaPredicted RBP14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 TRIM66O15016 1216 aa14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 RANBP6O60518 1105 aaKnown RBP14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 TPM1P09493 284 aa14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 LONRF3Q496Y0 759 aa14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 BTG4Q9NY30 223 aa14.14□□□□□ -0.15
SHROOM3-208ENST00000486758 IQCB1Q15051 598 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 ZNF827Q17R98 1081 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 SMARCE1Q969G3 411 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 OSBP2Q969R2 916 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 HAUS7Q99871 368 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 M0R2C6 588 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 E4F1Q66K89 784 aaPredicted RBP14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 KIAA1468Q9P260 1216 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 SLC12A7Q9Y666 1083 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 TECPR2O15040 1411 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 FGAP02671 866 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 IARSP41252 1262 aaKnown RBP14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 KCNQ4P56696 695 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 PNOCQ13519 176 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 PDIA6Q15084 440 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 CAGE1Q8TC20 777 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 PCMTD1Q96MG8 357 aaPredicted RBP14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 UBAC1Q9BSL1 405 aa14.13□□□□□ -0.15
SHROOM3-208ENST00000486758 NBPF26B4DH59 902 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 CTDSPL2Q05D32 466 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 SART3Q15020 963 aaKnown RBP14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 FKBP15Q5T1M5 1219 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 NBPF14Q5TI25 921 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 WWC2Q6AWC2 1192 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 NBPF10Q6P3W6 841 aaKnown RBP14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 STOX1Q6ZVD7 989 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 NBPF15Q8N660 670 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 MAGEB6Q8N7X4 407 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 PEAK1Q9H792 1746 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 DIP2AQ14689 1571 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 PRDM1O75626 825 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 MAST3O60307 1309 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 GTF2A1P52655 376 aaPredicted RBP14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 SYCP1Q15431 976 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 TRIM22Q8IYM9 498 aa14.12□□□□□ -0.15
SHROOM3-208ENST00000486758 EIF3JO75822 258 aaKnown RBP14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 ARMCX5Q6P1M9 558 aa14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 BAG1Q99933 345 aaPredicted RBP14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 PXDNQ92626 1479 aa14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 ERLIN1O75477 346 aa14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 DHX40Q8IX18 779 aaKnown RBP14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 PUS7LQ9H0K6 701 aaKnown RBP14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 GREM2Q9H772 168 aa14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 ARMT1Q9H993 441 aa14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 HOOK1Q9UJC3 728 aaKnown RBP14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 KIF5CO60282 957 aa14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 SCARF1Q14162 830 aa14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 JMYQ8N9B5 988 aa14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 FANCLQ9NW38 375 aa14.11□□□□□ -0.15
SHROOM3-208ENST00000486758 IRX3P78415 501 aaPredicted RBP14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 H0YHG0 523 aa14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 ZBTB43O43298 467 aa14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 EPB41L2O43491 1005 aaKnown RBP14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 AFMP43652 599 aa14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 ZNF569Q5MCW4 686 aa14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 NSUN7Q8NE18 718 aaKnown RBP14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 KCNG4Q8TDN1 519 aa14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 CLIC6Q96NY7 704 aa14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 TSPYL1Q9H0U9 437 aa14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 CEMIPQ8WUJ3 1361 aa14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 TMEM232C9JQI7 657 aa14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 MBD4O95243 580 aa14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 PDIA3P30101 505 aaKnown RBP14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 DNAJC21Q5F1R6 531 aaKnown RBP14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 DZIP3Q86Y13 1208 aaKnown RBP14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 GOLGA1Q92805 767 aa14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 NACAP1Q9BZK3 213 aa14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 ZNF446Q9NWS9 450 aa14.1□□□□□ -0.15
SHROOM3-208ENST00000486758 EXOC5O00471 708 aa14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 COBLO75128 1261 aa14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 WDHD1O75717 1129 aaPredicted RBP14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 MYL5Q02045 173 aa14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 MAP3K12Q12852 859 aa14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 DRC1Q96MC2 740 aa14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 TRPC5Q9UL62 973 aaPredicted RBP14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 IRX2Q9BZI1 471 aaPredicted RBP14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 PDE11AQ9HCR9 933 aa14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 KCNJ14Q9UNX9 436 aa14.09□□□□□ -0.15
SHROOM3-208ENST00000486758 PFKFB1P16118 471 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms