RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 HSPA8P11142 646 aaKnown RBP19.6■□□□□ 0.73
HDAC8-218ENST00000486704 KIF23Q02241 960 aaPredicted RBP19.6■□□□□ 0.73
HDAC8-218ENST00000486704 CCDC158Q5M9N0 1113 aa19.6■□□□□ 0.73
HDAC8-218ENST00000486704 PI16Q6UXB8 463 aa19.6■□□□□ 0.73
HDAC8-218ENST00000486704 SLF2Q8IX21 1173 aa19.6■□□□□ 0.73
HDAC8-218ENST00000486704 FAM163AQ96GL9 167 aaPredicted RBP19.6■□□□□ 0.73
HDAC8-218ENST00000486704 TMEM39BQ9GZU3 492 aa19.6■□□□□ 0.73
HDAC8-218ENST00000486704 ABCF2Q9UG63 623 aa19.6■□□□□ 0.73
HDAC8-218ENST00000486704 DBNLQ9UJU6 430 aaKnown RBP19.6■□□□□ 0.73
HDAC8-218ENST00000486704 CDK5RAP2Q96SN8 1893 aa19.6■□□□□ 0.73
HDAC8-218ENST00000486704 FOCADQ5VW36 1801 aa19.6■□□□□ 0.73
HDAC8-218ENST00000486704 CACNB3P54284 484 aa19.59■□□□□ 0.73
HDAC8-218ENST00000486704 PRKG1Q13976 671 aa19.59■□□□□ 0.73
HDAC8-218ENST00000486704 TTC39AQ5SRH9 613 aa19.59■□□□□ 0.73
HDAC8-218ENST00000486704 COL13A1Q5TAT6 717 aaPredicted RBP19.59■□□□□ 0.73
HDAC8-218ENST00000486704 CDC42EP5Q6NZY7 148 aa19.59■□□□□ 0.73
HDAC8-218ENST00000486704 ERICH6Q7L0X2 663 aa19.59■□□□□ 0.73
HDAC8-218ENST00000486704 EAF2Q96CJ1 260 aaPredicted RBP19.59■□□□□ 0.73
HDAC8-218ENST00000486704 MROH7-TTC4A0A0A0MT08 1334 aa19.58■□□□□ 0.73
HDAC8-218ENST00000486704 IREB2P48200 963 aaKnown RBP19.58■□□□□ 0.72
HDAC8-218ENST00000486704 CDAN1Q8IWY9 1227 aa19.58■□□□□ 0.72
HDAC8-218ENST00000486704 SAGE1Q9NXZ1 904 aa19.58■□□□□ 0.72
HDAC8-218ENST00000486704 FZD1Q9UP38 647 aa19.58■□□□□ 0.72
HDAC8-218ENST00000486704 IGSF3O75054 1194 aa19.57■□□□□ 0.72
HDAC8-218ENST00000486704 USP2O75604 605 aaPredicted RBP19.57■□□□□ 0.72
HDAC8-218ENST00000486704 LBX1P52954 281 aa19.57■□□□□ 0.72
HDAC8-218ENST00000486704 MECOMQ03112 1051 aa19.57■□□□□ 0.72
HDAC8-218ENST00000486704 RHPN1Q8TCX5 695 aa19.57■□□□□ 0.72
HDAC8-218ENST00000486704 HOOK2Q96ED9 719 aa19.57■□□□□ 0.72
HDAC8-218ENST00000486704 KIF1BPQ96EK5 621 aa19.57■□□□□ 0.72
HDAC8-218ENST00000486704 YTHDC1Q96MU7 727 aaKnown RBP19.57■□□□□ 0.72
HDAC8-218ENST00000486704 TLR7Q9NYK1 1049 aaKnown RBP19.57■□□□□ 0.72
HDAC8-218ENST00000486704 RRP1P56182 461 aaKnown RBP19.56■□□□□ 0.72
HDAC8-218ENST00000486704 ANKRD13AQ8IZ07 590 aa19.56■□□□□ 0.72
HDAC8-218ENST00000486704 ZNF384Q8TF68 577 aa19.56■□□□□ 0.72
HDAC8-218ENST00000486704 FAM151AQ8WW52 585 aa19.56■□□□□ 0.72
HDAC8-218ENST00000486704 CSRNP1Q96S65 589 aa19.56■□□□□ 0.72
HDAC8-218ENST00000486704 RAB11FIP3O75154 756 aa19.55■□□□□ 0.72
HDAC8-218ENST00000486704 GSTO1P78417 241 aa19.55■□□□□ 0.72
HDAC8-218ENST00000486704 NSUN4Q96CB9 384 aaKnown RBP19.55■□□□□ 0.72
HDAC8-218ENST00000486704 IDI2Q9BXS1 227 aa19.55■□□□□ 0.72
HDAC8-218ENST00000486704 CCDC8Q9H0W5 538 aaPredicted RBP19.55■□□□□ 0.72
HDAC8-218ENST00000486704 USP40Q9NVE5 1235 aa19.55■□□□□ 0.72
HDAC8-218ENST00000486704 GPR75-ASB3A0A0A6YYF3 556 aa19.54■□□□□ 0.72
HDAC8-218ENST00000486704 ZBTB48P10074 688 aaPredicted RBP19.54■□□□□ 0.72
HDAC8-218ENST00000486704 NFIAQ12857 509 aa19.54■□□□□ 0.72
HDAC8-218ENST00000486704 SPRYD7Q5W111 196 aa19.54■□□□□ 0.72
HDAC8-218ENST00000486704 TBC1D9Q6ZT07 1266 aa19.54■□□□□ 0.72
HDAC8-218ENST00000486704 AACSQ86V21 672 aa19.54■□□□□ 0.72
HDAC8-218ENST00000486704 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.54■□□□□ 0.72
HDAC8-218ENST00000486704 CLMNQ96JQ2 1002 aa19.54■□□□□ 0.72
HDAC8-218ENST00000486704 FAM198AQ9UFP1 575 aa19.54■□□□□ 0.72
HDAC8-218ENST00000486704 CASP8AP2Q9UKL3 1982 aa19.53■□□□□ 0.72
HDAC8-218ENST00000486704 MAP4K4O95819 1239 aaPredicted RBP19.53■□□□□ 0.72
HDAC8-218ENST00000486704 CYP2E1P05181 493 aaPredicted RBP19.53■□□□□ 0.72
HDAC8-218ENST00000486704 LDHCP07864 332 aa19.53■□□□□ 0.72
HDAC8-218ENST00000486704 BTDP43251 543 aa19.53■□□□□ 0.72
HDAC8-218ENST00000486704 CLASRPQ8N2M8 674 aaKnown RBP19.53■□□□□ 0.72
HDAC8-218ENST00000486704 SLC10A4Q96EP9 437 aa19.53■□□□□ 0.72
HDAC8-218ENST00000486704 IL1RAPL2Q9NP60 686 aa19.53■□□□□ 0.72
HDAC8-218ENST00000486704 SNRKQ9NRH2 765 aa19.53■□□□□ 0.72
HDAC8-218ENST00000486704 RAI14Q9P0K7 980 aa19.53■□□□□ 0.72
HDAC8-218ENST00000486704 LRP2BPQ9P2M1 347 aa19.53■□□□□ 0.72
HDAC8-218ENST00000486704 COL2A1P02458 1487 aaPredicted RBP19.53■□□□□ 0.72
HDAC8-218ENST00000486704 ENTPD3O75355 529 aa19.52■□□□□ 0.72
HDAC8-218ENST00000486704 TM4SF4P48230 202 aa19.52■□□□□ 0.72
HDAC8-218ENST00000486704 SREBF2Q12772 1141 aa19.52■□□□□ 0.72
HDAC8-218ENST00000486704 DCAF15Q66K64 600 aa19.52■□□□□ 0.72
HDAC8-218ENST00000486704 WNK4Q96J92 1243 aa19.52■□□□□ 0.72
HDAC8-218ENST00000486704 MYH7P12883 1935 aa19.52■□□□□ 0.72
HDAC8-218ENST00000486704 WDHD1O75717 1129 aaPredicted RBP19.51■□□□□ 0.71
HDAC8-218ENST00000486704 ZAP70P43403 619 aa19.51■□□□□ 0.71
HDAC8-218ENST00000486704 RHBDL3P58872 404 aa19.51■□□□□ 0.71
HDAC8-218ENST00000486704 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.51■□□□□ 0.71
HDAC8-218ENST00000486704 RNF186Q9NXI6 227 aa19.51■□□□□ 0.71
HDAC8-218ENST00000486704 TSKSQ9UJT2 592 aa19.51■□□□□ 0.71
HDAC8-218ENST00000486704 ATRNL1Q5VV63 1379 aa19.51■□□□□ 0.71
HDAC8-218ENST00000486704 DOCK1Q14185 1865 aa19.51■□□□□ 0.71
HDAC8-218ENST00000486704 MANSC4A6NHS7 340 aaPredicted RBP19.5■□□□□ 0.71
HDAC8-218ENST00000486704 NPM3O75607 178 aaKnown RBP19.5■□□□□ 0.71
HDAC8-218ENST00000486704 RGS3P49796 1198 aa19.5■□□□□ 0.71
HDAC8-218ENST00000486704 MAP3K9P80192 1104 aa19.5■□□□□ 0.71
HDAC8-218ENST00000486704 TCP10Q12799 353 aa19.5■□□□□ 0.71
HDAC8-218ENST00000486704 VGLL4Q14135 290 aa19.5■□□□□ 0.71
HDAC8-218ENST00000486704 SIPA1L1O43166 1804 aa19.49■□□□□ 0.71
HDAC8-218ENST00000486704 MKRN3Q13064 507 aaKnown RBP19.49■□□□□ 0.71
HDAC8-218ENST00000486704 NAA16Q6N069 864 aaPredicted RBP19.49■□□□□ 0.71
HDAC8-218ENST00000486704 TMED8Q6PL24 325 aaPredicted RBP19.49■□□□□ 0.71
HDAC8-218ENST00000486704 TNS4Q8IZW8 715 aa19.49■□□□□ 0.71
HDAC8-218ENST00000486704 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.49■□□□□ 0.71
HDAC8-218ENST00000486704 ZNF341Q9BYN7 854 aa19.49■□□□□ 0.71
HDAC8-218ENST00000486704 CSADQ9Y600 493 aa19.49■□□□□ 0.71
HDAC8-218ENST00000486704 ATAD5Q96QE3 1844 aa19.48■□□□□ 0.71
HDAC8-218ENST00000486704 APBB1O00213 710 aa19.48■□□□□ 0.71
HDAC8-218ENST00000486704 TRPA1O75762 1119 aa19.48■□□□□ 0.71
HDAC8-218ENST00000486704 IFIT2P09913 472 aaKnown RBP19.48■□□□□ 0.71
HDAC8-218ENST00000486704 GJA5P36382 358 aa19.48■□□□□ 0.71
HDAC8-218ENST00000486704 INHBEP58166 350 aa19.48■□□□□ 0.71
HDAC8-218ENST00000486704 WRNIP1Q96S55 665 aa19.48■□□□□ 0.71
HDAC8-218ENST00000486704 ELP3Q9H9T3 547 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms