RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 RPAP1Q9BWH6 1393 aaPredicted RBP20.29■□□□□ 0.84
PDE6D-205ENST00000486044 ANP32CO43423 234 aa20.28■□□□□ 0.84
PDE6D-205ENST00000486044 C17orf99Q6UX52 265 aa20.28■□□□□ 0.84
PDE6D-205ENST00000486044 MIGA2Q7L4E1 593 aa20.28■□□□□ 0.84
PDE6D-205ENST00000486044 ANKRD23Q86SG2 305 aa20.28■□□□□ 0.84
PDE6D-205ENST00000486044 FAM151AQ8WW52 585 aa20.28■□□□□ 0.84
PDE6D-205ENST00000486044 ZEB1P37275 1124 aaPredicted RBP20.27■□□□□ 0.84
PDE6D-205ENST00000486044 ANKRD44Q8N8A2 993 aa20.27■□□□□ 0.84
PDE6D-205ENST00000486044 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.27■□□□□ 0.84
PDE6D-205ENST00000486044 NKX2-3Q8TAU0 364 aa20.27■□□□□ 0.84
PDE6D-205ENST00000486044 H0YGN5 161 aa20.26■□□□□ 0.83
PDE6D-205ENST00000486044 PDHXO00330 501 aa20.26■□□□□ 0.83
PDE6D-205ENST00000486044 SLC5A1P13866 664 aa20.26■□□□□ 0.83
PDE6D-205ENST00000486044 PSMC4P43686 418 aa20.26■□□□□ 0.83
PDE6D-205ENST00000486044 RAET1EQ8TD07 263 aa20.26■□□□□ 0.83
PDE6D-205ENST00000486044 SRRDQ9UH36 339 aa20.26■□□□□ 0.83
PDE6D-205ENST00000486044 CPA4Q9UI42 421 aa20.26■□□□□ 0.83
PDE6D-205ENST00000486044 FMNL1O95466 1100 aaPredicted RBP20.25■□□□□ 0.83
PDE6D-205ENST00000486044 INPP5BP32019 993 aa20.25■□□□□ 0.83
PDE6D-205ENST00000486044 PTPRCP08575 1304 aa20.25■□□□□ 0.83
PDE6D-205ENST00000486044 FGFR2P21802 821 aa20.24■□□□□ 0.83
PDE6D-205ENST00000486044 KLHDC4Q8TBB5 520 aa20.24■□□□□ 0.83
PDE6D-205ENST00000486044 LPIN2Q92539 896 aa20.24■□□□□ 0.83
PDE6D-205ENST00000486044 DPF3Q92784 378 aa20.24■□□□□ 0.83
PDE6D-205ENST00000486044 TRIM47Q96LD4 638 aa20.24■□□□□ 0.83
PDE6D-205ENST00000486044 ZNF112Q9UJU3 913 aa20.24■□□□□ 0.83
PDE6D-205ENST00000486044 KCNH4Q9UQ05 1017 aa20.24■□□□□ 0.83
PDE6D-205ENST00000486044 ECM2O94769 699 aaPredicted RBP20.23■□□□□ 0.83
PDE6D-205ENST00000486044 GRK4P32298 578 aa20.23■□□□□ 0.83
PDE6D-205ENST00000486044 TCP10Q12799 353 aa20.23■□□□□ 0.83
PDE6D-205ENST00000486044 AK9Q5TCS8 1911 aa20.22■□□□□ 0.83
PDE6D-205ENST00000486044 EYA2O00167 538 aa20.22■□□□□ 0.83
PDE6D-205ENST00000486044 OSBPP22059 807 aa20.22■□□□□ 0.83
PDE6D-205ENST00000486044 CDC42EP5Q6NZY7 148 aa20.22■□□□□ 0.83
PDE6D-205ENST00000486044 MRPL50Q8N5N7 158 aaKnown RBP20.22■□□□□ 0.83
PDE6D-205ENST00000486044 PARK7Q99497 189 aaKnown RBP20.22■□□□□ 0.83
PDE6D-205ENST00000486044 USP44Q9H0E7 712 aa20.22■□□□□ 0.83
PDE6D-205ENST00000486044 GNL3LQ9NVN8 582 aaKnown RBP20.22■□□□□ 0.83
PDE6D-205ENST00000486044 BIN2Q9UBW5 565 aaPredicted RBP20.22■□□□□ 0.83
PDE6D-205ENST00000486044 CEP290O15078 2479 aa20.22■□□□□ 0.83
PDE6D-205ENST00000486044 ZSWIM8A7E2V4 1837 aa20.22■□□□□ 0.83
PDE6D-205ENST00000486044 CXCL11O14625 94 aa20.21■□□□□ 0.83
PDE6D-205ENST00000486044 UBXN2AP68543 259 aa20.21■□□□□ 0.83
PDE6D-205ENST00000486044 MTFR1Q15390 333 aa20.21■□□□□ 0.83
PDE6D-205ENST00000486044 NOL9Q5SY16 702 aaKnown RBP20.21■□□□□ 0.83
PDE6D-205ENST00000486044 HTATIP2Q9BUP3 242 aa20.21■□□□□ 0.83
PDE6D-205ENST00000486044 DAGLAQ9Y4D2 1042 aa20.21■□□□□ 0.83
PDE6D-205ENST00000486044 MYPNQ86TC9 1320 aa20.21■□□□□ 0.83
PDE6D-205ENST00000486044 LDHBP07195 334 aaKnown RBP20.2■□□□□ 0.82
PDE6D-205ENST00000486044 GJB1P08034 283 aa20.2■□□□□ 0.82
PDE6D-205ENST00000486044 CTGFP29279 349 aa20.2■□□□□ 0.82
PDE6D-205ENST00000486044 GJA8P48165 433 aa20.2■□□□□ 0.82
PDE6D-205ENST00000486044 FCGRTP55899 365 aa20.2■□□□□ 0.82
PDE6D-205ENST00000486044 FAM9BQ8IZU0 186 aa20.2■□□□□ 0.82
PDE6D-205ENST00000486044 MYH13Q9UKX3 1938 aa20.19■□□□□ 0.82
PDE6D-205ENST00000486044 CCL5P13501 91 aa20.19■□□□□ 0.82
PDE6D-205ENST00000486044 DIXDC1Q155Q3 683 aa20.19■□□□□ 0.82
PDE6D-205ENST00000486044 FASTKD5Q7L8L6 764 aaKnown RBP20.19■□□□□ 0.82
PDE6D-205ENST00000486044 SHISA4Q96DD7 197 aa20.19■□□□□ 0.82
PDE6D-205ENST00000486044 RNF208Q9H0X6 261 aa20.19■□□□□ 0.82
PDE6D-205ENST00000486044 USP40Q9NVE5 1235 aa20.19■□□□□ 0.82
PDE6D-205ENST00000486044 ADGRA2Q96PE1 1338 aa20.19■□□□□ 0.82
PDE6D-205ENST00000486044 NFIAQ12857 509 aa20.18■□□□□ 0.82
PDE6D-205ENST00000486044 CHRDL2Q6WN34 429 aa20.18■□□□□ 0.82
PDE6D-205ENST00000486044 PICK1Q9NRD5 415 aa20.18■□□□□ 0.82
PDE6D-205ENST00000486044 FBXO3Q9UK99 471 aa20.18■□□□□ 0.82
PDE6D-205ENST00000486044 NR2E3Q9Y5X4 410 aa20.18■□□□□ 0.82
PDE6D-205ENST00000486044 SEMA3EO15041 775 aa20.17■□□□□ 0.82
PDE6D-205ENST00000486044 PRDX5P30044 214 aa20.17■□□□□ 0.82
PDE6D-205ENST00000486044 MOGSQ13724 837 aa20.17■□□□□ 0.82
PDE6D-205ENST00000486044 SLAIN1Q8ND83 568 aa20.17■□□□□ 0.82
PDE6D-205ENST00000486044 CEP126Q9P2H0 1117 aa20.17■□□□□ 0.82
PDE6D-205ENST00000486044 FAM198AQ9UFP1 575 aa20.17■□□□□ 0.82
PDE6D-205ENST00000486044 TRIOBPQ9H2D6 2365 aa20.17■□□□□ 0.82
PDE6D-205ENST00000486044 BCRP11274 1271 aa20.16■□□□□ 0.82
PDE6D-205ENST00000486044 CAPN2P17655 700 aa20.16■□□□□ 0.82
PDE6D-205ENST00000486044 RFX5P48382 616 aaPredicted RBP20.16■□□□□ 0.82
PDE6D-205ENST00000486044 PRKCZQ05513 592 aa20.16■□□□□ 0.82
PDE6D-205ENST00000486044 ATP2B3Q16720 1220 aa20.16■□□□□ 0.82
PDE6D-205ENST00000486044 ZGPATQ8N5A5 531 aaKnown RBP20.16■□□□□ 0.82
PDE6D-205ENST00000486044 DENND2AQ9ULE3 1009 aa20.16■□□□□ 0.82
PDE6D-205ENST00000486044 ZHX2Q9Y6X8 837 aa20.16■□□□□ 0.82
PDE6D-205ENST00000486044 SALL1Q9NSC2 1324 aa20.16■□□□□ 0.82
PDE6D-205ENST00000486044 ENTPD3O75355 529 aa20.15■□□□□ 0.82
PDE6D-205ENST00000486044 CIAO1O76071 339 aa20.15■□□□□ 0.82
PDE6D-205ENST00000486044 CYP2C8P10632 490 aa20.15■□□□□ 0.82
PDE6D-205ENST00000486044 GPAT2Q6NUI2 795 aa20.15■□□□□ 0.82
PDE6D-205ENST00000486044 ATG9AQ7Z3C6 839 aa20.15■□□□□ 0.82
PDE6D-205ENST00000486044 SCYL3Q8IZE3 742 aa20.15■□□□□ 0.82
PDE6D-205ENST00000486044 ZNF521Q96K83 1311 aa20.14■□□□□ 0.81
PDE6D-205ENST00000486044 UBE2Q1Q7Z7E8 422 aa20.14■□□□□ 0.81
PDE6D-205ENST00000486044 ZSCAN29Q8IWY8 852 aaPredicted RBP20.14■□□□□ 0.81
PDE6D-205ENST00000486044 SLF2Q8IX21 1173 aa20.14■□□□□ 0.81
PDE6D-205ENST00000486044 SSH1Q8WYL5 1049 aa20.14■□□□□ 0.81
PDE6D-205ENST00000486044 RBM27Q9P2N5 1060 aaKnown RBP20.14■□□□□ 0.81
PDE6D-205ENST00000486044 HDAC5Q9UQL6 1122 aa20.14■□□□□ 0.81
PDE6D-205ENST00000486044 SLC45A1Q9Y2W3 748 aa20.14■□□□□ 0.81
PDE6D-205ENST00000486044 A0A0G2JLL6 359 aaPredicted RBP20.13■□□□□ 0.81
PDE6D-205ENST00000486044 PHF20L1A8MW92 1017 aa20.13■□□□□ 0.81
PDE6D-205ENST00000486044 PRRT2Q7Z6L0 340 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms