RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 TCP10L2B9ZVM9 353 aa15.2■□□□□ 0.02
HMG20B-211ENST00000486028 IGSF3O75054 1194 aa15.2■□□□□ 0.02
HMG20B-211ENST00000486028 ZAP70P43403 619 aa15.2■□□□□ 0.02
HMG20B-211ENST00000486028 VEGFBP49765 207 aa15.2■□□□□ 0.02
HMG20B-211ENST00000486028 MECOMQ03112 1051 aa15.2■□□□□ 0.02
HMG20B-211ENST00000486028 TTLL12Q14166 644 aaPredicted RBP15.2■□□□□ 0.02
HMG20B-211ENST00000486028 JMYQ8N9B5 988 aa15.2■□□□□ 0.02
HMG20B-211ENST00000486028 USP40Q9NVE5 1235 aa15.2■□□□□ 0.02
HMG20B-211ENST00000486028 SMARCA5O60264 1052 aaPredicted RBP15.19■□□□□ 0.02
HMG20B-211ENST00000486028 CYP2E1P05181 493 aaPredicted RBP15.19■□□□□ 0.02
HMG20B-211ENST00000486028 CDC42EP5Q6NZY7 148 aa15.19■□□□□ 0.02
HMG20B-211ENST00000486028 CAPNS2Q96L46 248 aa15.19■□□□□ 0.02
HMG20B-211ENST00000486028 GAKO14976 1311 aa15.18■□□□□ 0.02
HMG20B-211ENST00000486028 WDR33Q9C0J8 1336 aaKnown RBP15.18■□□□□ 0.02
HMG20B-211ENST00000486028 CACNB3P54284 484 aa15.18■□□□□ 0.02
HMG20B-211ENST00000486028 HDAC1Q13547 482 aaPredicted RBP15.18■□□□□ 0.02
HMG20B-211ENST00000486028 CYP4F22Q6NT55 531 aa15.18■□□□□ 0.02
HMG20B-211ENST00000486028 ARMC9Q7Z3E5 817 aa15.18■□□□□ 0.02
HMG20B-211ENST00000486028 FAM83AQ86UY5 434 aa15.18■□□□□ 0.02
HMG20B-211ENST00000486028 EXOC6Q8TAG9 804 aa15.18■□□□□ 0.02
HMG20B-211ENST00000486028 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.18■□□□□ 0.02
HMG20B-211ENST00000486028 NSUN4Q96CB9 384 aaKnown RBP15.18■□□□□ 0.02
HMG20B-211ENST00000486028 MROH7-TTC4A0A0A0MT08 1334 aa15.17■□□□□ 0.02
HMG20B-211ENST00000486028 GPR75-ASB3A0A0A6YYF3 556 aa15.17■□□□□ 0.02
HMG20B-211ENST00000486028 UBE2Q2LH0YL09 131 aa15.17■□□□□ 0.02
HMG20B-211ENST00000486028 PPP1R12BO60237 982 aaPredicted RBP15.17■□□□□ 0.02
HMG20B-211ENST00000486028 GRM1Q13255 1194 aa15.17■□□□□ 0.02
HMG20B-211ENST00000486028 NBPF12Q5TAG4 269 aaPredicted RBP15.17■□□□□ 0.02
HMG20B-211ENST00000486028 NAA16Q6N069 864 aaPredicted RBP15.17■□□□□ 0.02
HMG20B-211ENST00000486028 RGMBQ6NW40 437 aa15.17■□□□□ 0.02
HMG20B-211ENST00000486028 CCDC102AQ96A19 550 aa15.17■□□□□ 0.02
HMG20B-211ENST00000486028 PIH1D3Q9NQM4 214 aaKnown RBP15.17■□□□□ 0.02
HMG20B-211ENST00000486028 ZBTB47Q9UFB7 747 aaPredicted RBP15.17■□□□□ 0.02
HMG20B-211ENST00000486028 MAP4K4O95819 1239 aaPredicted RBP15.16■□□□□ 0.02
HMG20B-211ENST00000486028 ATP5JP18859 108 aa15.16■□□□□ 0.02
HMG20B-211ENST00000486028 BTDP43251 543 aa15.16■□□□□ 0.02
HMG20B-211ENST00000486028 ZNF157P51786 506 aaPredicted RBP15.16■□□□□ 0.02
HMG20B-211ENST00000486028 PRKG1Q13976 671 aa15.16■□□□□ 0.02
HMG20B-211ENST00000486028 TTF1Q15361 905 aaPredicted RBP15.16■□□□□ 0.02
HMG20B-211ENST00000486028 MOB2Q70IA6 237 aa15.16■□□□□ 0.02
HMG20B-211ENST00000486028 ZNF384Q8TF68 577 aa15.16■□□□□ 0.02
HMG20B-211ENST00000486028 HOOK2Q96ED9 719 aa15.16■□□□□ 0.02
HMG20B-211ENST00000486028 GPATCH3Q96I76 525 aa15.16■□□□□ 0.02
HMG20B-211ENST00000486028 NOL10Q9BSC4 688 aaKnown RBP15.16■□□□□ 0.02
HMG20B-211ENST00000486028 TMEM39BQ9GZU3 492 aa15.16■□□□□ 0.02
HMG20B-211ENST00000486028 RWDD1Q9H446 243 aaPredicted RBP15.16■□□□□ 0.02
HMG20B-211ENST00000486028 ANGEL1Q9UNK9 670 aaKnown RBP15.16■□□□□ 0.02
HMG20B-211ENST00000486028 ECM29Q5VYK3 1845 aa15.15■□□□□ 0.02
HMG20B-211ENST00000486028 IDH1O75874 414 aaKnown RBP15.15■□□□□ 0.02
HMG20B-211ENST00000486028 MAP3K12Q12852 859 aa15.15■□□□□ 0.02
HMG20B-211ENST00000486028 TMED8Q6PL24 325 aaPredicted RBP15.15■□□□□ 0.02
HMG20B-211ENST00000486028 FAM151AQ8WW52 585 aa15.15■□□□□ 0.02
HMG20B-211ENST00000486028 GCC1Q96CN9 775 aa15.15■□□□□ 0.02
HMG20B-211ENST00000486028 TEPSINQ96N21 525 aa15.15■□□□□ 0.02
HMG20B-211ENST00000486028 NDUFB9Q9Y6M9 179 aa15.15■□□□□ 0.02
HMG20B-211ENST00000486028 AKAP11Q9UKA4 1901 aa15.14■□□□□ 0.01
HMG20B-211ENST00000486028 BAG3O95817 575 aa15.14■□□□□ 0.01
HMG20B-211ENST00000486028 MAP2K2P36507 400 aa15.14■□□□□ 0.01
HMG20B-211ENST00000486028 TCP10Q12799 353 aa15.14■□□□□ 0.01
HMG20B-211ENST00000486028 DNAJC2Q99543 621 aaKnown RBP15.14■□□□□ 0.01
HMG20B-211ENST00000486028 IDI2Q9BXS1 227 aa15.14■□□□□ 0.01
HMG20B-211ENST00000486028 BOLA2Q9H3K6 86 aa15.14■□□□□ 0.01
HMG20B-211ENST00000486028 ANTXR1Q9H6X2 564 aa15.14■□□□□ 0.01
HMG20B-211ENST00000486028 ECHDC1Q9NTX5 307 aa15.14■□□□□ 0.01
HMG20B-211ENST00000486028 PAPPA2Q9BXP8 1791 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 UNCXA6NJT0 531 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 GOLIM4O00461 696 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 ENTPD3O75355 529 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 PLCG2P16885 1265 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 CYP7A1P22680 504 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 IREB2P48200 963 aaKnown RBP15.13■□□□□ 0.01
HMG20B-211ENST00000486028 NFIAQ12857 509 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 NOGQ13253 232 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 MKRN4PQ13434 485 aaPredicted RBP15.13■□□□□ 0.01
HMG20B-211ENST00000486028 MAP3K11Q16584 847 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 LDLRAD1Q5T700 205 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 ANKRD45Q5TZF3 282 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 HAUS7Q99871 368 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 FAM198AQ9UFP1 575 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 MYH2Q9UKX2 1941 aa15.13■□□□□ 0.01
HMG20B-211ENST00000486028 AOC2O75106 756 aa15.12■□□□□ 0.01
HMG20B-211ENST00000486028 USP2O75604 605 aaPredicted RBP15.12■□□□□ 0.01
HMG20B-211ENST00000486028 RGS3P49796 1198 aa15.12■□□□□ 0.01
HMG20B-211ENST00000486028 RHBDL3P58872 404 aa15.12■□□□□ 0.01
HMG20B-211ENST00000486028 PPP4CP60510 307 aa15.12■□□□□ 0.01
HMG20B-211ENST00000486028 IRX6P78412 446 aaPredicted RBP15.12■□□□□ 0.01
HMG20B-211ENST00000486028 MAP2K1Q02750 393 aaPredicted RBP15.12■□□□□ 0.01
HMG20B-211ENST00000486028 CDAN1Q8IWY9 1227 aa15.12■□□□□ 0.01
HMG20B-211ENST00000486028 MAGEB6Q8N7X4 407 aa15.12■□□□□ 0.01
HMG20B-211ENST00000486028 SLC10A4Q96EP9 437 aa15.12■□□□□ 0.01
HMG20B-211ENST00000486028 PAG1Q9NWQ8 432 aa15.12■□□□□ 0.01
HMG20B-211ENST00000486028 FAM155AB1AL88 458 aaPredicted RBP15.11■□□□□ 0.01
HMG20B-211ENST00000486028 WDHD1O75717 1129 aaPredicted RBP15.11■□□□□ 0.01
HMG20B-211ENST00000486028 SLC10A3P09131 477 aa15.11■□□□□ 0.01
HMG20B-211ENST00000486028 DCAF15Q66K64 600 aa15.11■□□□□ 0.01
HMG20B-211ENST00000486028 ZSCAN29Q8IWY8 852 aaPredicted RBP15.11■□□□□ 0.01
HMG20B-211ENST00000486028 TEX11Q8IYF3 940 aa15.11■□□□□ 0.01
HMG20B-211ENST00000486028 FZD1Q9UP38 647 aa15.11■□□□□ 0.01
HMG20B-211ENST00000486028 RPAP1Q9BWH6 1393 aaPredicted RBP15.11■□□□□ 0.01
HMG20B-211ENST00000486028 PICALMQ13492 652 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms