RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 FZD1Q9UP38 647 aa15.31■□□□□ 0.04
PTCD1-205ENST00000485746 SLC10A3P09131 477 aa15.3■□□□□ 0.04
PTCD1-205ENST00000485746 POLR2AP24928 1970 aaKnown RBP15.3■□□□□ 0.04
PTCD1-205ENST00000485746 CTCFP49711 727 aaPredicted RBP15.3■□□□□ 0.04
PTCD1-205ENST00000485746 KIF23Q02241 960 aaPredicted RBP15.3■□□□□ 0.04
PTCD1-205ENST00000485746 MECOMQ03112 1051 aa15.3■□□□□ 0.04
PTCD1-205ENST00000485746 TCP10Q12799 353 aa15.3■□□□□ 0.04
PTCD1-205ENST00000485746 CDC42EP5Q6NZY7 148 aa15.3■□□□□ 0.04
PTCD1-205ENST00000485746 RASAL3Q86YV0 1011 aa15.3■□□□□ 0.04
PTCD1-205ENST00000485746 HOOK2Q96ED9 719 aa15.3■□□□□ 0.04
PTCD1-205ENST00000485746 FOXN1O15353 648 aa15.29■□□□□ 0.04
PTCD1-205ENST00000485746 BTDP43251 543 aa15.29■□□□□ 0.04
PTCD1-205ENST00000485746 ZAP70P43403 619 aa15.29■□□□□ 0.04
PTCD1-205ENST00000485746 MKRN3Q13064 507 aaKnown RBP15.29■□□□□ 0.04
PTCD1-205ENST00000485746 FKBP1CQ5VVH2 108 aa15.29■□□□□ 0.04
PTCD1-205ENST00000485746 FAM83AQ86UY5 434 aa15.29■□□□□ 0.04
PTCD1-205ENST00000485746 MROH7-TTC4A0A0A0MT08 1334 aa15.28■□□□□ 0.04
PTCD1-205ENST00000485746 FAM155AB1AL88 458 aaPredicted RBP15.28■□□□□ 0.04
PTCD1-205ENST00000485746 NAA16Q6N069 864 aaPredicted RBP15.28■□□□□ 0.04
PTCD1-205ENST00000485746 ZNF512BQ96KM6 892 aaPredicted RBP15.28■□□□□ 0.04
PTCD1-205ENST00000485746 CRBNQ96SW2 442 aa15.28■□□□□ 0.04
PTCD1-205ENST00000485746 ZIC5Q96T25 663 aa15.28■□□□□ 0.04
PTCD1-205ENST00000485746 PAPPA2Q9BXP8 1791 aa15.27■□□□□ 0.04
PTCD1-205ENST00000485746 USP2O75604 605 aaPredicted RBP15.27■□□□□ 0.04
PTCD1-205ENST00000485746 ZSCAN29Q8IWY8 852 aaPredicted RBP15.27■□□□□ 0.04
PTCD1-205ENST00000485746 FAM151AQ8WW52 585 aa15.27■□□□□ 0.04
PTCD1-205ENST00000485746 NSUN4Q96CB9 384 aaKnown RBP15.27■□□□□ 0.04
PTCD1-205ENST00000485746 FAM163AQ96GL9 167 aaPredicted RBP15.27■□□□□ 0.04
PTCD1-205ENST00000485746 LRRCC1Q9C099 1032 aa15.27■□□□□ 0.04
PTCD1-205ENST00000485746 GAKO14976 1311 aa15.26■□□□□ 0.03
PTCD1-205ENST00000485746 CA12O43570 354 aa15.26■□□□□ 0.03
PTCD1-205ENST00000485746 IDH1O75874 414 aaKnown RBP15.26■□□□□ 0.03
PTCD1-205ENST00000485746 BAG3O95817 575 aa15.26■□□□□ 0.03
PTCD1-205ENST00000485746 CYP2E1P05181 493 aaPredicted RBP15.26■□□□□ 0.03
PTCD1-205ENST00000485746 PICALMQ13492 652 aa15.26■□□□□ 0.03
PTCD1-205ENST00000485746 MAP3K11Q16584 847 aa15.26■□□□□ 0.03
PTCD1-205ENST00000485746 LDLRAD1Q5T700 205 aa15.26■□□□□ 0.03
PTCD1-205ENST00000485746 DCAF15Q66K64 600 aa15.26■□□□□ 0.03
PTCD1-205ENST00000485746 REM2Q8IYK8 340 aaPredicted RBP15.26■□□□□ 0.03
PTCD1-205ENST00000485746 ANKRD13AQ8IZ07 590 aa15.26■□□□□ 0.03
PTCD1-205ENST00000485746 TEPSINQ96N21 525 aa15.26■□□□□ 0.03
PTCD1-205ENST00000485746 ZBTB47Q9UFB7 747 aaPredicted RBP15.26■□□□□ 0.03
PTCD1-205ENST00000485746 ARAP2Q8WZ64 1704 aa15.26■□□□□ 0.03
PTCD1-205ENST00000485746 LBX1P52954 281 aa15.25■□□□□ 0.03
PTCD1-205ENST00000485746 MAP3K9P80192 1104 aa15.25■□□□□ 0.03
PTCD1-205ENST00000485746 NFIAQ12857 509 aa15.25■□□□□ 0.03
PTCD1-205ENST00000485746 MIGA2Q7L4E1 593 aa15.25■□□□□ 0.03
PTCD1-205ENST00000485746 CDAN1Q8IWY9 1227 aa15.25■□□□□ 0.03
PTCD1-205ENST00000485746 TSKSQ9UJT2 592 aa15.25■□□□□ 0.03
PTCD1-205ENST00000485746 CSADQ9Y600 493 aa15.25■□□□□ 0.03
PTCD1-205ENST00000485746 GPR75-ASB3A0A0A6YYF3 556 aa15.24■□□□□ 0.03
PTCD1-205ENST00000485746 UNCXA6NJT0 531 aa15.24■□□□□ 0.03
PTCD1-205ENST00000485746 SMARCA5O60264 1052 aaPredicted RBP15.24■□□□□ 0.03
PTCD1-205ENST00000485746 CYP7A1P22680 504 aa15.24■□□□□ 0.03
PTCD1-205ENST00000485746 RGS3P49796 1198 aa15.24■□□□□ 0.03
PTCD1-205ENST00000485746 MAP3K12Q12852 859 aa15.24■□□□□ 0.03
PTCD1-205ENST00000485746 TTF1Q15361 905 aaPredicted RBP15.24■□□□□ 0.03
PTCD1-205ENST00000485746 CLMNQ96JQ2 1002 aa15.24■□□□□ 0.03
PTCD1-205ENST00000485746 CSRNP1Q96S65 589 aa15.24■□□□□ 0.03
PTCD1-205ENST00000485746 DNAJC2Q99543 621 aaKnown RBP15.24■□□□□ 0.03
PTCD1-205ENST00000485746 ELP3Q9H9T3 547 aa15.24■□□□□ 0.03
PTCD1-205ENST00000485746 PIH1D3Q9NQM4 214 aaKnown RBP15.24■□□□□ 0.03
PTCD1-205ENST00000485746 FAM198AQ9UFP1 575 aa15.24■□□□□ 0.03
PTCD1-205ENST00000485746 NDUFB9Q9Y6M9 179 aa15.24■□□□□ 0.03
PTCD1-205ENST00000485746 ENTPD3O75355 529 aa15.23■□□□□ 0.03
PTCD1-205ENST00000485746 MAP4K4O95819 1239 aaPredicted RBP15.23■□□□□ 0.03
PTCD1-205ENST00000485746 HSPA8P11142 646 aaKnown RBP15.23■□□□□ 0.03
PTCD1-205ENST00000485746 PLCG2P16885 1265 aa15.23■□□□□ 0.03
PTCD1-205ENST00000485746 SREBF2Q12772 1141 aa15.23■□□□□ 0.03
PTCD1-205ENST00000485746 SPRYD7Q5W111 196 aa15.23■□□□□ 0.03
PTCD1-205ENST00000485746 TEX11Q8IYF3 940 aa15.23■□□□□ 0.03
PTCD1-205ENST00000485746 GPATCH3Q96I76 525 aa15.23■□□□□ 0.03
PTCD1-205ENST00000485746 WRNIP1Q96S55 665 aa15.23■□□□□ 0.03
PTCD1-205ENST00000485746 IDI2Q9BXS1 227 aa15.23■□□□□ 0.03
PTCD1-205ENST00000485746 ZNF341Q9BYN7 854 aa15.23■□□□□ 0.03
PTCD1-205ENST00000485746 DCTPP1Q9H773 170 aa15.23■□□□□ 0.03
PTCD1-205ENST00000485746 AATFQ9NY61 560 aaKnown RBP eCLIP15.23■□□□□ 0.03
PTCD1-205ENST00000485746 PCDHB15Q9Y5E8 787 aa15.23■□□□□ 0.03
PTCD1-205ENST00000485746 MYH13Q9UKX3 1938 aa15.23■□□□□ 0.03
PTCD1-205ENST00000485746 IGSF3O75054 1194 aa15.22■□□□□ 0.03
PTCD1-205ENST00000485746 TRPA1O75762 1119 aa15.22■□□□□ 0.03
PTCD1-205ENST00000485746 COL13A1Q5TAT6 717 aaPredicted RBP15.22■□□□□ 0.03
PTCD1-205ENST00000485746 ZFPM1Q8IX07 1006 aa15.22■□□□□ 0.03
PTCD1-205ENST00000485746 MAGEB6Q8N7X4 407 aa15.22■□□□□ 0.03
PTCD1-205ENST00000485746 WNK4Q96J92 1243 aa15.22■□□□□ 0.03
PTCD1-205ENST00000485746 BOLA2Q9H3K6 86 aa15.22■□□□□ 0.03
PTCD1-205ENST00000485746 PRDM10Q9NQV6 1147 aa15.22■□□□□ 0.03
PTCD1-205ENST00000485746 SUPT16HQ9Y5B9 1047 aaKnown RBP15.22■□□□□ 0.03
PTCD1-205ENST00000485746 SSC5DA1L4H1 1573 aa15.22■□□□□ 0.03
PTCD1-205ENST00000485746 MANSC4A6NHS7 340 aaPredicted RBP15.21■□□□□ 0.03
PTCD1-205ENST00000485746 GOLIM4O00461 696 aa15.21■□□□□ 0.03
PTCD1-205ENST00000485746 SH3RF3Q8TEJ3 882 aaPredicted RBP15.21■□□□□ 0.03
PTCD1-205ENST00000485746 ZNF384Q8TF68 577 aa15.21■□□□□ 0.03
PTCD1-205ENST00000485746 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.21■□□□□ 0.03
PTCD1-205ENST00000485746 ANTXR1Q9H6X2 564 aa15.21■□□□□ 0.03
PTCD1-205ENST00000485746 RNF186Q9NXI6 227 aa15.21■□□□□ 0.03
PTCD1-205ENST00000485746 RPAP1Q9BWH6 1393 aaPredicted RBP15.21■□□□□ 0.02
PTCD1-205ENST00000485746 WDHD1O75717 1129 aaPredicted RBP15.2■□□□□ 0.02
PTCD1-205ENST00000485746 ZBTB48P10074 688 aaPredicted RBP15.2■□□□□ 0.02
PTCD1-205ENST00000485746 RHBDL3P58872 404 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms