RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 WRNIP1Q96S55 665 aa16.33■□□□□ 0.2
HDAC6-227ENST00000485102 ZNF112Q9UJU3 913 aa16.33■□□□□ 0.2
HDAC6-227ENST00000485102 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
HDAC6-227ENST00000485102 PTCH2Q9Y6C5 1203 aa16.33■□□□□ 0.2
HDAC6-227ENST00000485102 EYA2O00167 538 aa16.32■□□□□ 0.2
HDAC6-227ENST00000485102 RFX5P48382 616 aaPredicted RBP16.32■□□□□ 0.2
HDAC6-227ENST00000485102 FAM151AQ8WW52 585 aa16.32■□□□□ 0.2
HDAC6-227ENST00000485102 LPIN2Q92539 896 aa16.32■□□□□ 0.2
HDAC6-227ENST00000485102 ZKSCAN4Q969J2 545 aaPredicted RBP16.32■□□□□ 0.2
HDAC6-227ENST00000485102 ZNF341Q9BYN7 854 aa16.32■□□□□ 0.2
HDAC6-227ENST00000485102 KIF22Q14807 665 aa16.31■□□□□ 0.2
HDAC6-227ENST00000485102 C17orf99Q6UX52 265 aa16.31■□□□□ 0.2
HDAC6-227ENST00000485102 FAM9BQ8IZU0 186 aa16.31■□□□□ 0.2
HDAC6-227ENST00000485102 KLHDC4Q8TBB5 520 aa16.31■□□□□ 0.2
HDAC6-227ENST00000485102 SSH1Q8WYL5 1049 aa16.3■□□□□ 0.2
HDAC6-227ENST00000485102 KCNH4Q9UQ05 1017 aa16.3■□□□□ 0.2
HDAC6-227ENST00000485102 E9PSI1 815 aa16.29■□□□□ 0.2
HDAC6-227ENST00000485102 SLC5A1P13866 664 aa16.29■□□□□ 0.2
HDAC6-227ENST00000485102 ATG9AQ7Z3C6 839 aa16.29■□□□□ 0.2
HDAC6-227ENST00000485102 ANKRD23Q86SG2 305 aa16.29■□□□□ 0.2
HDAC6-227ENST00000485102 SALL1Q9NSC2 1324 aa16.28■□□□□ 0.2
HDAC6-227ENST00000485102 SLC4A8Q2Y0W8 1093 aa16.28■□□□□ 0.2
HDAC6-227ENST00000485102 ALDH1L2Q3SY69 923 aa16.28■□□□□ 0.2
HDAC6-227ENST00000485102 NOL9Q5SY16 702 aaKnown RBP16.28■□□□□ 0.2
HDAC6-227ENST00000485102 DAGLAQ9Y4D2 1042 aa16.28■□□□□ 0.2
HDAC6-227ENST00000485102 CIAO1O76071 339 aa16.27■□□□□ 0.2
HDAC6-227ENST00000485102 INPP5BP32019 993 aa16.27■□□□□ 0.2
HDAC6-227ENST00000485102 MOGSQ13724 837 aa16.27■□□□□ 0.2
HDAC6-227ENST00000485102 CDC42EP5Q6NZY7 148 aa16.27■□□□□ 0.2
HDAC6-227ENST00000485102 MIGA2Q7L4E1 593 aa16.27■□□□□ 0.2
HDAC6-227ENST00000485102 ARHGAP39Q9C0H5 1083 aa16.27■□□□□ 0.2
HDAC6-227ENST00000485102 MYH13Q9UKX3 1938 aa16.27■□□□□ 0.19
HDAC6-227ENST00000485102 ADGRA2Q96PE1 1338 aa16.26■□□□□ 0.19
HDAC6-227ENST00000485102 TRIOBPQ9H2D6 2365 aa16.26■□□□□ 0.19
HDAC6-227ENST00000485102 CXCL11O14625 94 aa16.26■□□□□ 0.19
HDAC6-227ENST00000485102 SEMA3EO15041 775 aa16.26■□□□□ 0.19
HDAC6-227ENST00000485102 HOXD10P28358 340 aa16.26■□□□□ 0.19
HDAC6-227ENST00000485102 SLFN5Q08AF3 891 aa16.26■□□□□ 0.19
HDAC6-227ENST00000485102 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-227ENST00000485102 GNL3LQ9NVN8 582 aaKnown RBP16.26■□□□□ 0.19
HDAC6-227ENST00000485102 SRRDQ9UH36 339 aa16.26■□□□□ 0.19
HDAC6-227ENST00000485102 PDHXO00330 501 aa16.25■□□□□ 0.19
HDAC6-227ENST00000485102 PRDX5P30044 214 aa16.25■□□□□ 0.19
HDAC6-227ENST00000485102 MAP3K10Q02779 954 aa16.25■□□□□ 0.19
HDAC6-227ENST00000485102 NFIAQ12857 509 aa16.25■□□□□ 0.19
HDAC6-227ENST00000485102 SH3TC2Q8TF17 1288 aa16.25■□□□□ 0.19
HDAC6-227ENST00000485102 CEP126Q9P2H0 1117 aa16.25■□□□□ 0.19
HDAC6-227ENST00000485102 FAM198AQ9UFP1 575 aa16.25■□□□□ 0.19
HDAC6-227ENST00000485102 AK9Q5TCS8 1911 aa16.25■□□□□ 0.19
HDAC6-227ENST00000485102 LDHBP07195 334 aaKnown RBP16.24■□□□□ 0.19
HDAC6-227ENST00000485102 CTGFP29279 349 aa16.24■□□□□ 0.19
HDAC6-227ENST00000485102 PSMC4P43686 418 aa16.24■□□□□ 0.19
HDAC6-227ENST00000485102 FXR1P51114 621 aaKnown RBP eCLIP16.24■□□□□ 0.19
HDAC6-227ENST00000485102 DIXDC1Q155Q3 683 aa16.24■□□□□ 0.19
HDAC6-227ENST00000485102 ATP2B3Q16720 1220 aa16.24■□□□□ 0.19
HDAC6-227ENST00000485102 TRIM47Q96LD4 638 aa16.24■□□□□ 0.19
HDAC6-227ENST00000485102 IDI2Q9BXS1 227 aa16.24■□□□□ 0.19
HDAC6-227ENST00000485102 DENND2AQ9ULE3 1009 aa16.24■□□□□ 0.19
HDAC6-227ENST00000485102 HDAC5Q9UQL6 1122 aa16.24■□□□□ 0.19
HDAC6-227ENST00000485102 ENTPD3O75355 529 aa16.23■□□□□ 0.19
HDAC6-227ENST00000485102 BCRP11274 1271 aa16.23■□□□□ 0.19
HDAC6-227ENST00000485102 IL15P40933 162 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-227ENST00000485102 TCP10Q12799 353 aa16.23■□□□□ 0.19
HDAC6-227ENST00000485102 NKX2-3Q8TAU0 364 aa16.23■□□□□ 0.19
HDAC6-227ENST00000485102 FAM163AQ96GL9 167 aaPredicted RBP16.23■□□□□ 0.19
HDAC6-227ENST00000485102 USP40Q9NVE5 1235 aa16.23■□□□□ 0.19
HDAC6-227ENST00000485102 CPA4Q9UI42 421 aa16.23■□□□□ 0.19
HDAC6-227ENST00000485102 ZSWIM8A7E2V4 1837 aa16.23■□□□□ 0.19
HDAC6-227ENST00000485102 ATRNL1Q5VV63 1379 aa16.23■□□□□ 0.19
HDAC6-227ENST00000485102 GAKO14976 1311 aa16.22■□□□□ 0.19
HDAC6-227ENST00000485102 PHF20L1A8MW92 1017 aa16.22■□□□□ 0.19
HDAC6-227ENST00000485102 CT47B1P0C2W7 299 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-227ENST00000485102 UBTFL1P0CB47 393 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-227ENST00000485102 OSBPP22059 807 aa16.22■□□□□ 0.19
HDAC6-227ENST00000485102 GRK4P32298 578 aa16.22■□□□□ 0.19
HDAC6-227ENST00000485102 GPAT2Q6NUI2 795 aa16.22■□□□□ 0.19
HDAC6-227ENST00000485102 TRMT2AQ8IZ69 625 aaKnown RBP16.22■□□□□ 0.19
HDAC6-227ENST00000485102 ZGPATQ8N5A5 531 aaKnown RBP16.22■□□□□ 0.19
HDAC6-227ENST00000485102 COPRSQ9NQ92 184 aa16.22■□□□□ 0.19
HDAC6-227ENST00000485102 COLQQ9Y215 455 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-227ENST00000485102 PDS5AQ29RF7 1337 aaKnown RBP16.21■□□□□ 0.19
HDAC6-227ENST00000485102 GJB1P08034 283 aa16.21■□□□□ 0.19
HDAC6-227ENST00000485102 CAPN2P17655 700 aa16.21■□□□□ 0.19
HDAC6-227ENST00000485102 FASTKD5Q7L8L6 764 aaKnown RBP16.21■□□□□ 0.19
HDAC6-227ENST00000485102 UBE2Q1Q7Z7E8 422 aa16.21■□□□□ 0.19
HDAC6-227ENST00000485102 PARK7Q99497 189 aaKnown RBP16.21■□□□□ 0.19
HDAC6-227ENST00000485102 SLC45A1Q9Y2W3 748 aa16.21■□□□□ 0.19
HDAC6-227ENST00000485102 A0A0G2JLL6 359 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-227ENST00000485102 FMNL1O95466 1100 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-227ENST00000485102 PHKA1P46020 1223 aa16.2■□□□□ 0.18
HDAC6-227ENST00000485102 GJA8P48165 433 aa16.2■□□□□ 0.18
HDAC6-227ENST00000485102 MTFR1Q15390 333 aa16.2■□□□□ 0.18
HDAC6-227ENST00000485102 PRRT2Q7Z6L0 340 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-227ENST00000485102 ZFPM1Q8IX07 1006 aa16.2■□□□□ 0.18
HDAC6-227ENST00000485102 SCYL3Q8IZE3 742 aa16.2■□□□□ 0.18
HDAC6-227ENST00000485102 RAET1EQ8TD07 263 aa16.2■□□□□ 0.18
HDAC6-227ENST00000485102 SHISA4Q96DD7 197 aa16.2■□□□□ 0.18
HDAC6-227ENST00000485102 MYH2Q9UKX2 1941 aa16.19■□□□□ 0.18
HDAC6-227ENST00000485102 RFX7Q2KHR2 1363 aa16.19■□□□□ 0.18
HDAC6-227ENST00000485102 H0YGN5 161 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms