RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 CCDC102AQ96A19 550 aa23.38■■□□□ 1.33
SNX17-206ENST00000484886 FZD1Q9UP38 647 aa23.38■■□□□ 1.33
SNX17-206ENST00000484886 PCDHB15Q9Y5E8 787 aa23.38■■□□□ 1.33
SNX17-206ENST00000484886 MROH7-TTC4A0A0A0MT08 1334 aa23.37■■□□□ 1.33
SNX17-206ENST00000484886 LDHCP07864 332 aa23.37■■□□□ 1.33
SNX17-206ENST00000484886 HSPA1AP0DMV8 641 aaKnown RBP23.37■■□□□ 1.33
SNX17-206ENST00000484886 HSPA1BP0DMV9 641 aaKnown RBP23.37■■□□□ 1.33
SNX17-206ENST00000484886 AIDAQ96BJ3 306 aa23.37■■□□□ 1.33
SNX17-206ENST00000484886 SUPT16HQ9Y5B9 1047 aaKnown RBP23.37■■□□□ 1.33
SNX17-206ENST00000484886 GAKO14976 1311 aa23.36■■□□□ 1.33
SNX17-206ENST00000484886 SSC5DA1L4H1 1573 aa23.36■■□□□ 1.33
SNX17-206ENST00000484886 SMARCA5O60264 1052 aaPredicted RBP23.36■■□□□ 1.33
SNX17-206ENST00000484886 CYP2E1P05181 493 aaPredicted RBP23.36■■□□□ 1.33
SNX17-206ENST00000484886 BTDP43251 543 aa23.36■■□□□ 1.33
SNX17-206ENST00000484886 NOGQ13253 232 aa23.36■■□□□ 1.33
SNX17-206ENST00000484886 FKBP1CQ5VVH2 108 aa23.36■■□□□ 1.33
SNX17-206ENST00000484886 NSUN4Q96CB9 384 aaKnown RBP23.36■■□□□ 1.33
SNX17-206ENST00000484886 THSD7BQ9C0I4 1608 aa23.35■■□□□ 1.33
SNX17-206ENST00000484886 MAP2K2P36507 400 aa23.35■■□□□ 1.33
SNX17-206ENST00000484886 MAP2K1Q02750 393 aaPredicted RBP23.35■■□□□ 1.33
SNX17-206ENST00000484886 TCP10Q12799 353 aa23.35■■□□□ 1.33
SNX17-206ENST00000484886 NAA16Q6N069 864 aaPredicted RBP23.35■■□□□ 1.33
SNX17-206ENST00000484886 FAM83AQ86UY5 434 aa23.35■■□□□ 1.33
SNX17-206ENST00000484886 CDAN1Q8IWY9 1227 aa23.35■■□□□ 1.33
SNX17-206ENST00000484886 NOL10Q9BSC4 688 aaKnown RBP23.35■■□□□ 1.33
SNX17-206ENST00000484886 DCTPP1Q9H773 170 aa23.35■■□□□ 1.33
SNX17-206ENST00000484886 NDUFB9Q9Y6M9 179 aa23.35■■□□□ 1.33
SNX17-206ENST00000484886 MAST2Q6P0Q8 1798 aa23.35■■□□□ 1.33
SNX17-206ENST00000484886 IREB2P48200 963 aaKnown RBP23.34■■□□□ 1.33
SNX17-206ENST00000484886 TEPSINQ96N21 525 aa23.34■■□□□ 1.33
SNX17-206ENST00000484886 BEGAINQ9BUH8 593 aa23.34■■□□□ 1.33
SNX17-206ENST00000484886 PIH1D3Q9NQM4 214 aaKnown RBP23.34■■□□□ 1.33
SNX17-206ENST00000484886 IDH1O75874 414 aaKnown RBP23.33■■□□□ 1.33
SNX17-206ENST00000484886 SLC10A3P09131 477 aa23.33■■□□□ 1.33
SNX17-206ENST00000484886 RASAL3Q86YV0 1011 aa23.33■■□□□ 1.33
SNX17-206ENST00000484886 ZNF384Q8TF68 577 aa23.33■■□□□ 1.33
SNX17-206ENST00000484886 FAM163AQ96GL9 167 aaPredicted RBP23.33■■□□□ 1.33
SNX17-206ENST00000484886 AK9Q5TCS8 1911 aa23.32■■□□□ 1.32
SNX17-206ENST00000484886 FAM155AB1AL88 458 aaPredicted RBP23.32■■□□□ 1.32
SNX17-206ENST00000484886 NFIAQ12857 509 aa23.32■■□□□ 1.32
SNX17-206ENST00000484886 HOOK2Q96ED9 719 aa23.32■■□□□ 1.32
SNX17-206ENST00000484886 DNAJC2Q99543 621 aaKnown RBP23.32■■□□□ 1.32
SNX17-206ENST00000484886 MYO5AQ9Y4I1 1855 aaKnown RBP23.31■■□□□ 1.32
SNX17-206ENST00000484886 GPR75-ASB3A0A0A6YYF3 556 aa23.31■■□□□ 1.32
SNX17-206ENST00000484886 PICALMQ13492 652 aa23.31■■□□□ 1.32
SNX17-206ENST00000484886 FAM151AQ8WW52 585 aa23.31■■□□□ 1.32
SNX17-206ENST00000484886 USP2O75604 605 aaPredicted RBP23.3■■□□□ 1.32
SNX17-206ENST00000484886 RGS3P49796 1198 aa23.3■■□□□ 1.32
SNX17-206ENST00000484886 MKRN3Q13064 507 aaKnown RBP23.3■■□□□ 1.32
SNX17-206ENST00000484886 SLC10A4Q96EP9 437 aa23.3■■□□□ 1.32
SNX17-206ENST00000484886 ZIC5Q96T25 663 aa23.3■■□□□ 1.32
SNX17-206ENST00000484886 ANTXR1Q9H6X2 564 aa23.3■■□□□ 1.32
SNX17-206ENST00000484886 WBP1LQ9NX94 342 aa23.3■■□□□ 1.32
SNX17-206ENST00000484886 ZBTB47Q9UFB7 747 aaPredicted RBP23.3■■□□□ 1.32
SNX17-206ENST00000484886 FAM198AQ9UFP1 575 aa23.3■■□□□ 1.32
SNX17-206ENST00000484886 RPAP1Q9BWH6 1393 aaPredicted RBP23.29■■□□□ 1.32
SNX17-206ENST00000484886 KIF23Q02241 960 aaPredicted RBP23.29■■□□□ 1.32
SNX17-206ENST00000484886 MAP3K12Q12852 859 aa23.29■■□□□ 1.32
SNX17-206ENST00000484886 AAMPQ13685 434 aa23.29■■□□□ 1.32
SNX17-206ENST00000484886 TTF1Q15361 905 aaPredicted RBP23.29■■□□□ 1.32
SNX17-206ENST00000484886 MAP3K11Q16584 847 aa23.29■■□□□ 1.32
SNX17-206ENST00000484886 LDLRAD1Q5T700 205 aa23.29■■□□□ 1.32
SNX17-206ENST00000484886 ZSCAN29Q8IWY8 852 aaPredicted RBP23.29■■□□□ 1.32
SNX17-206ENST00000484886 EXOC6Q8TAG9 804 aa23.29■■□□□ 1.32
SNX17-206ENST00000484886 GOLIM4O00461 696 aa23.28■■□□□ 1.32
SNX17-206ENST00000484886 BAG3O95817 575 aa23.28■■□□□ 1.32
SNX17-206ENST00000484886 CYP7A1P22680 504 aa23.28■■□□□ 1.32
SNX17-206ENST00000484886 DCAF15Q66K64 600 aa23.28■■□□□ 1.32
SNX17-206ENST00000484886 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.28■■□□□ 1.32
SNX17-206ENST00000484886 GPATCH3Q96I76 525 aa23.28■■□□□ 1.32
SNX17-206ENST00000484886 CLMNQ96JQ2 1002 aa23.28■■□□□ 1.32
SNX17-206ENST00000484886 IDI2Q9BXS1 227 aa23.28■■□□□ 1.32
SNX17-206ENST00000484886 BOLA2Q9H3K6 86 aa23.28■■□□□ 1.32
SNX17-206ENST00000484886 AATFQ9NY61 560 aaKnown RBP eCLIP23.28■■□□□ 1.32
SNX17-206ENST00000484886 FOXN1O15353 648 aa23.27■■□□□ 1.32
SNX17-206ENST00000484886 ENTPD3O75355 529 aa23.27■■□□□ 1.32
SNX17-206ENST00000484886 TEX11Q8IYF3 940 aa23.27■■□□□ 1.32
SNX17-206ENST00000484886 ANKRD13AQ8IZ07 590 aa23.27■■□□□ 1.32
SNX17-206ENST00000484886 MAGEB6Q8N7X4 407 aa23.27■■□□□ 1.32
SNX17-206ENST00000484886 IGSF3O75054 1194 aa23.26■■□□□ 1.31
SNX17-206ENST00000484886 WDHD1O75717 1129 aaPredicted RBP23.26■■□□□ 1.31
SNX17-206ENST00000484886 PLCG2P16885 1265 aa23.26■■□□□ 1.31
SNX17-206ENST00000484886 ATP5JP18859 108 aa23.26■■□□□ 1.31
SNX17-206ENST00000484886 RHBDL3P58872 404 aa23.26■■□□□ 1.31
SNX17-206ENST00000484886 MIGA2Q7L4E1 593 aa23.26■■□□□ 1.31
SNX17-206ENST00000484886 ZFPM1Q8IX07 1006 aa23.26■■□□□ 1.31
SNX17-206ENST00000484886 OTOFQ9HC10 1997 aa23.26■■□□□ 1.31
SNX17-206ENST00000484886 DOCK2Q92608 1830 aa23.26■■□□□ 1.31
SNX17-206ENST00000484886 PCNTO95613 3336 aa23.26■■□□□ 1.31
SNX17-206ENST00000484886 MAP4K4O95819 1239 aaPredicted RBP23.25■■□□□ 1.31
SNX17-206ENST00000484886 CTCFP49711 727 aaPredicted RBP23.25■■□□□ 1.31
SNX17-206ENST00000484886 IRX6P78412 446 aaPredicted RBP23.25■■□□□ 1.31
SNX17-206ENST00000484886 ADGRA1Q86SQ6 560 aa23.25■■□□□ 1.31
SNX17-206ENST00000484886 SH3RF3Q8TEJ3 882 aaPredicted RBP23.25■■□□□ 1.31
SNX17-206ENST00000484886 DDX4Q9NQI0 724 aaKnown RBP23.25■■□□□ 1.31
SNX17-206ENST00000484886 PAG1Q9NWQ8 432 aa23.25■■□□□ 1.31
SNX17-206ENST00000484886 CSADQ9Y600 493 aa23.25■■□□□ 1.31
SNX17-206ENST00000484886 RFX7Q2KHR2 1363 aa23.25■■□□□ 1.31
SNX17-206ENST00000484886 UNCXA6NJT0 531 aa23.24■■□□□ 1.31
SNX17-206ENST00000484886 MAP3K9P80192 1104 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms