RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 VGLL4Q14135 290 aa16.98■□□□□ 0.31
ITGA4-210ENST00000484404 GORABQ5T7V8 394 aa16.98■□□□□ 0.31
ITGA4-210ENST00000484404 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.98■□□□□ 0.31
ITGA4-210ENST00000484404 DZIP1Q86YF9 867 aaKnown RBP16.98■□□□□ 0.31
ITGA4-210ENST00000484404 ZNF296Q8WUU4 475 aaPredicted RBP16.98■□□□□ 0.31
ITGA4-210ENST00000484404 SALL1Q9NSC2 1324 aa16.97■□□□□ 0.31
ITGA4-210ENST00000484404 MANSC4A6NHS7 340 aaPredicted RBP16.97■□□□□ 0.31
ITGA4-210ENST00000484404 SEMA3EO15041 775 aa16.97■□□□□ 0.31
ITGA4-210ENST00000484404 ZBTB48P10074 688 aaPredicted RBP16.97■□□□□ 0.31
ITGA4-210ENST00000484404 MVPQ14764 893 aaKnown RBP16.97■□□□□ 0.31
ITGA4-210ENST00000484404 MIGA2Q7L4E1 593 aa16.97■□□□□ 0.31
ITGA4-210ENST00000484404 ZKSCAN4Q969J2 545 aaPredicted RBP16.97■□□□□ 0.31
ITGA4-210ENST00000484404 OTUD5Q96G74 571 aa16.97■□□□□ 0.31
ITGA4-210ENST00000484404 USP40Q9NVE5 1235 aa16.97■□□□□ 0.31
ITGA4-210ENST00000484404 DOCK1Q14185 1865 aa16.97■□□□□ 0.31
ITGA4-210ENST00000484404 TBC1D9Q6ZT07 1266 aa16.96■□□□□ 0.31
ITGA4-210ENST00000484404 IFNL1Q8IU54 200 aa16.96■□□□□ 0.31
ITGA4-210ENST00000484404 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.96■□□□□ 0.31
ITGA4-210ENST00000484404 WRNIP1Q96S55 665 aa16.96■□□□□ 0.31
ITGA4-210ENST00000484404 CSADQ9Y600 493 aa16.96■□□□□ 0.31
ITGA4-210ENST00000484404 FOCADQ5VW36 1801 aa16.96■□□□□ 0.3
ITGA4-210ENST00000484404 RPAP1Q9BWH6 1393 aaPredicted RBP16.95■□□□□ 0.3
ITGA4-210ENST00000484404 GPR25O00155 361 aa16.95■□□□□ 0.3
ITGA4-210ENST00000484404 MAP3K9P80192 1104 aa16.95■□□□□ 0.3
ITGA4-210ENST00000484404 POLA2Q14181 598 aa16.95■□□□□ 0.3
ITGA4-210ENST00000484404 CTU1Q7Z7A3 348 aaKnown RBP16.95■□□□□ 0.3
ITGA4-210ENST00000484404 FAM83AQ86UY5 434 aa16.95■□□□□ 0.3
ITGA4-210ENST00000484404 ZFPM1Q8IX07 1006 aa16.95■□□□□ 0.3
ITGA4-210ENST00000484404 MRIQ9BWK5 157 aa16.95■□□□□ 0.3
ITGA4-210ENST00000484404 HMG20BQ9P0W2 317 aa16.95■□□□□ 0.3
ITGA4-210ENST00000484404 FAM198AQ9UFP1 575 aa16.95■□□□□ 0.3
ITGA4-210ENST00000484404 PTPRFP10586 1907 aa16.94■□□□□ 0.3
ITGA4-210ENST00000484404 ZBTB7BO15156 539 aaPredicted RBP16.94■□□□□ 0.3
ITGA4-210ENST00000484404 SURF6O75683 361 aaKnown RBP16.94■□□□□ 0.3
ITGA4-210ENST00000484404 BTDP43251 543 aa16.94■□□□□ 0.3
ITGA4-210ENST00000484404 ATP8B2P98198 1209 aa16.94■□□□□ 0.3
ITGA4-210ENST00000484404 PICALMQ13492 652 aa16.94■□□□□ 0.3
ITGA4-210ENST00000484404 ZGPATQ8N5A5 531 aaKnown RBP16.94■□□□□ 0.3
ITGA4-210ENST00000484404 SSH3Q8TE77 659 aa16.94■□□□□ 0.3
ITGA4-210ENST00000484404 SNRKQ9NRH2 765 aa16.94■□□□□ 0.3
ITGA4-210ENST00000484404 SNCAIPQ9Y6H5 919 aa16.94■□□□□ 0.3
ITGA4-210ENST00000484404 PHIPQ8WWQ0 1821 aa16.93■□□□□ 0.3
ITGA4-210ENST00000484404 INPP5BP32019 993 aa16.93■□□□□ 0.3
ITGA4-210ENST00000484404 MCAMP43121 646 aa16.93■□□□□ 0.3
ITGA4-210ENST00000484404 RGS3P49796 1198 aa16.93■□□□□ 0.3
ITGA4-210ENST00000484404 MECOMQ03112 1051 aa16.93■□□□□ 0.3
ITGA4-210ENST00000484404 FKBP1CQ5VVH2 108 aa16.93■□□□□ 0.3
ITGA4-210ENST00000484404 SPATA5Q8NB90 893 aa16.93■□□□□ 0.3
ITGA4-210ENST00000484404 FAM151AQ8WW52 585 aa16.93■□□□□ 0.3
ITGA4-210ENST00000484404 PTPN18Q99952 460 aa16.93■□□□□ 0.3
ITGA4-210ENST00000484404 DBNDD2Q9BQY9 259 aa16.93■□□□□ 0.3
ITGA4-210ENST00000484404 SIPA1L1O43166 1804 aa16.93■□□□□ 0.3
ITGA4-210ENST00000484404 CCL15-CCL14A0A0B4J2E2 113 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 FKTNO75072 461 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 SLURP2P0DP57 97 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 ARID4AP29374 1257 aaPredicted RBP16.92■□□□□ 0.3
ITGA4-210ENST00000484404 CCL15Q16663 113 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 TNNI3KQ59H18 835 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 TTC39AQ5SRH9 613 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 DCAF15Q66K64 600 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 ERICH6Q7L0X2 663 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 ZNF384Q8TF68 577 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 BCL11AQ9H165 835 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 TLR7Q9NYK1 1049 aaKnown RBP16.92■□□□□ 0.3
ITGA4-210ENST00000484404 RAI14Q9P0K7 980 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 FPGT-TNNI3KV9GXZ4 949 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 MROH7-TTC4A0A0A0MT08 1334 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 GAKO14976 1311 aa16.92■□□□□ 0.3
ITGA4-210ENST00000484404 PDS5AQ29RF7 1337 aaKnown RBP16.92■□□□□ 0.3
ITGA4-210ENST00000484404 RFX7Q2KHR2 1363 aa16.91■□□□□ 0.3
ITGA4-210ENST00000484404 UNCXA6NJT0 531 aa16.91■□□□□ 0.3
ITGA4-210ENST00000484404 SOX10P56693 466 aa16.91■□□□□ 0.3
ITGA4-210ENST00000484404 CRHR2Q13324 411 aa16.91■□□□□ 0.3
ITGA4-210ENST00000484404 SPTY2D1Q68D10 685 aaPredicted RBP16.91■□□□□ 0.3
ITGA4-210ENST00000484404 CEP85Q6P2H3 762 aa16.91■□□□□ 0.3
ITGA4-210ENST00000484404 ZSCAN29Q8IWY8 852 aaPredicted RBP16.91■□□□□ 0.3
ITGA4-210ENST00000484404 BRI3BPQ8WY22 251 aa16.91■□□□□ 0.3
ITGA4-210ENST00000484404 ZNF341Q9BYN7 854 aa16.91■□□□□ 0.3
ITGA4-210ENST00000484404 DDX4Q9NQI0 724 aaKnown RBP16.91■□□□□ 0.3
ITGA4-210ENST00000484404 EXOC6BQ9Y2D4 811 aa16.91■□□□□ 0.3
ITGA4-210ENST00000484404 MYH1P12882 1939 aa16.9■□□□□ 0.3
ITGA4-210ENST00000484404 SPDYE5A6NIY4 337 aa16.9■□□□□ 0.3
ITGA4-210ENST00000484404 ALDH1A1P00352 501 aa16.9■□□□□ 0.3
ITGA4-210ENST00000484404 INHBEP58166 350 aa16.9■□□□□ 0.3
ITGA4-210ENST00000484404 MS4A4AQ96JQ5 239 aa16.9■□□□□ 0.3
ITGA4-210ENST00000484404 CCDC8Q9H0W5 538 aaPredicted RBP16.9■□□□□ 0.3
ITGA4-210ENST00000484404 COG6Q9Y2V7 657 aa16.9■□□□□ 0.3
ITGA4-210ENST00000484404 APBB1O00213 710 aa16.89■□□□□ 0.29
ITGA4-210ENST00000484404 SH3BP5LQ7L8J4 393 aa16.89■□□□□ 0.29
ITGA4-210ENST00000484404 CD99L2Q8TCZ2 262 aa16.89■□□□□ 0.29
ITGA4-210ENST00000484404 HOOK2Q96ED9 719 aa16.89■□□□□ 0.29
ITGA4-210ENST00000484404 FAM196BA6NMK8 535 aa16.88■□□□□ 0.29
ITGA4-210ENST00000484404 IRF6O14896 467 aa16.88■□□□□ 0.29
ITGA4-210ENST00000484404 WDHD1O75717 1129 aaPredicted RBP16.88■□□□□ 0.29
ITGA4-210ENST00000484404 ECM2O94769 699 aaPredicted RBP16.88■□□□□ 0.29
ITGA4-210ENST00000484404 UQCRFS1P1P0C7P4 283 aa16.88■□□□□ 0.29
ITGA4-210ENST00000484404 GTF2A2P52657 109 aa16.88■□□□□ 0.29
ITGA4-210ENST00000484404 TAF1CQ15572 869 aaPredicted RBP16.88■□□□□ 0.29
ITGA4-210ENST00000484404 OTUD7BQ6GQQ9 843 aa16.88■□□□□ 0.29
ITGA4-210ENST00000484404 SLF2Q8IX21 1173 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms