RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 GIMAP6Q6P9H5 292 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 ANKRD18AQ8IVF6 992 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 FNBP4Q8N3X1 1017 aaPredicted RBP8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 MAGEB6Q8N7X4 407 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 FAM200AQ8TCP9 573 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 BICD2Q8TD16 824 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 SEC31BQ9NQW1 1179 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 BSDC1Q9NW68 430 aaPredicted RBP8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 TFIP11Q9UBB9 837 aaKnown RBP8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 NAP1L2Q9ULW6 460 aaPredicted RBP8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 HPS5Q9UPZ3 1129 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 ZKSCAN5Q9Y2L8 839 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 BTAF1O14981 1849 aa8.63□□□□□ -1.03
SHROOM3-206ENST00000484236 NID2Q14112 1375 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 A0A0G2JS52 829 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 KDM4AO75164 1064 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 YEATS4O95619 227 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 FDPSP14324 419 aaKnown RBP8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 LIG1P18858 919 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 CHST3Q7LGC8 479 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 IFNL3Q8IZI9 196 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 TMTC2Q8N394 836 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 LINC00116Q8NCU8 138 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 FBXO18Q8NFZ0 1043 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 HELBQ8NG08 1087 aaPredicted RBP8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 PGBD1Q96JS3 809 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 C8orf76Q96K31 380 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 NBPF3Q9H094 633 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 NAPBQ9H115 298 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 RNF41Q9H4P4 317 aaPredicted RBP8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 NCOA5Q9HCD5 579 aaKnown RBP8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 DACT1Q9NYF0 836 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 RTEL1Q9NZ71 1219 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 ORC3Q9UBD5 711 aaPredicted RBP8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 NARFQ9UHQ1 456 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 LY75O60449 1722 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 MYH13Q9UKX3 1938 aa8.62□□□□□ -1.03
SHROOM3-206ENST00000484236 SPATA31A6Q5VVP1 1343 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 STK36Q9NRP7 1315 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 A0A1W2PQ27 194 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 A0A1W2PQ64 194 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 A0A1W2PQD8 194 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 KCNQ2O43526 872 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 RPS6KA4O75676 772 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 MBD4O95243 580 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 PCP11498 1178 aaKnown RBP8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 TYRO3Q06418 890 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 SART3Q15020 963 aaKnown RBP8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 ERFEQ4G0M1 354 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 AKNAD1Q5T1N1 836 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 SASS6Q6UVJ0 657 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 CCDC73Q6ZRK6 1079 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 TBC1D10CQ8IV04 446 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 KCNG4Q8TDN1 519 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 IGDCC4Q8TDY8 1250 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 STAG1Q8WVM7 1258 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 NGLY1Q96IV0 654 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 ANKRD2Q9GZV1 360 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 POLR3EQ9NVU0 708 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 USP25Q9UHP3 1055 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 DENND2AQ9ULE3 1009 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 TAF1LQ8IZX4 1826 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 MAST2Q6P0Q8 1798 aa8.61□□□□□ -1.03
SHROOM3-206ENST00000484236 KIAA1551Q9HCM1 1747 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 ECM29Q5VYK3 1845 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 FAM177BA6PVY3 158 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 GSG1L2A8MUP6 293 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 ZBTB43O43298 467 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 DTNBO60941 627 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 PTMAP06454 111 aaKnown RBP8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 NT5C2P49902 561 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 METAP2P50579 478 aaKnown RBP eCLIP8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 BCAMP50895 628 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 TERF1P54274 439 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 FAM160A1Q05DH4 1040 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 PPP2R5BQ15173 497 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 FAM98CQ17RN3 349 aaKnown RBP8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 CAVIN4Q5BKX8 364 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 ADALQ6DHV7 355 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 SYNE3Q6ZMZ3 975 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 MFSD6Q6ZSS7 791 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 CYB5R4Q7L1T6 521 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 WASF1Q92558 559 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 USP28Q96RU2 1077 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 BMP2KQ9NSY1 1161 aaPredicted RBP8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 LRP2BPQ9P2M1 347 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 ANAPC4Q9UJX5 808 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 MRVI1Q9Y6F6 885 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 CACNA1SQ13698 1873 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 CCDC88AQ3V6T2 1871 aa8.6□□□□□ -1.03
SHROOM3-206ENST00000484236 CCDC196A0A1B0GTZ2 297 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 GOLGA6L6A8MZA4 724 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 B4E1Z4 1266 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 KINO60870 393 aaKnown RBP8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 NR1I2O75469 434 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 OFD1O75665 1012 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 ADCY5O95622 1261 aa8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 GTF2E1P29083 439 aaPredicted RBP8.59□□□□□ -1.03
SHROOM3-206ENST00000484236 TDO2P48775 406 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms