RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-212	ENST00000483617	PPP2R3B	Q9Y5P8	575 aa		13.77	□□□□□ -0.21
PTPN18-212	ENST00000483617	CLRN2	A0PK11	232 aa		13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	HIP1	O00291	1037 aa		13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	UQCRFS1P1	P0C7P4	283 aa		13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	RBM5	P52756	815 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	ARMC9	Q7Z3E5	817 aa		13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	REM2	Q8IYK8	340 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	PI4K2B	Q8TCG2	481 aa		13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	EVI5L	Q96CN4	794 aa		13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	XAGE2	Q96GT9	111 aa		13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	PRMT6	Q96LA8	375 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	CSRNP1	Q96S65	589 aa		13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	GNL3L	Q9NVN8	582 aa	Known RBP	13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	TTF2	Q9UNY4	1162 aa	Known RBP	13.76	□□□□□ -0.21
PTPN18-212	ENST00000483617	SSC5D	A1L4H1	1573 aa		13.75	□□□□□ -0.21
PTPN18-212	ENST00000483617	FGFR2	P21802	821 aa		13.75	□□□□□ -0.21
PTPN18-212	ENST00000483617	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
PTPN18-212	ENST00000483617	RUFY2	Q8WXA3	655 aa		13.75	□□□□□ -0.21
PTPN18-212	ENST00000483617	ABHD8	Q96I13	439 aa		13.75	□□□□□ -0.21
PTPN18-212	ENST00000483617	VEZT	Q9HBM0	779 aa		13.75	□□□□□ -0.21
PTPN18-212	ENST00000483617	TSHZ2	Q9NRE2	1034 aa		13.75	□□□□□ -0.21
PTPN18-212	ENST00000483617	RNF186	Q9NXI6	227 aa		13.75	□□□□□ -0.21
PTPN18-212	ENST00000483617	TLR7	Q9NYK1	1049 aa	Known RBP	13.75	□□□□□ -0.21
PTPN18-212	ENST00000483617	SERPINA10	Q9UK55	444 aa		13.75	□□□□□ -0.21
PTPN18-212	ENST00000483617	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN18-212	ENST00000483617	AKAP11	Q9UKA4	1901 aa		13.74	□□□□□ -0.21
PTPN18-212	ENST00000483617	FRAT2	O75474	233 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN18-212	ENST00000483617	BCAM	P50895	628 aa		13.74	□□□□□ -0.21
PTPN18-212	ENST00000483617	CHAF1A	Q13111	956 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN18-212	ENST00000483617	PRKG1	Q13976	671 aa		13.74	□□□□□ -0.21
PTPN18-212	ENST00000483617	TICAM2	Q86XR7	235 aa		13.74	□□□□□ -0.21
PTPN18-212	ENST00000483617	TBC1D22A	Q8WUA7	517 aa		13.74	□□□□□ -0.21
PTPN18-212	ENST00000483617	BOLA2	Q9H3K6	86 aa		13.74	□□□□□ -0.21
PTPN18-212	ENST00000483617	ANGEL1	Q9UNK9	670 aa	Known RBP	13.74	□□□□□ -0.21
PTPN18-212	ENST00000483617	TRPA1	O75762	1119 aa		13.73	□□□□□ -0.21
PTPN18-212	ENST00000483617	CRK	P46108	304 aa		13.73	□□□□□ -0.21
PTPN18-212	ENST00000483617	SPDYE2	Q495Y8	402 aa		13.73	□□□□□ -0.21
PTPN18-212	ENST00000483617	TBC1D9	Q6ZT07	1266 aa		13.73	□□□□□ -0.21
PTPN18-212	ENST00000483617	DNAJC2	Q99543	621 aa	Known RBP	13.73	□□□□□ -0.21
PTPN18-212	ENST00000483617	HAUS7	Q99871	368 aa		13.73	□□□□□ -0.21
PTPN18-212	ENST00000483617	FSD1	Q9BTV5	496 aa		13.73	□□□□□ -0.21
PTPN18-212	ENST00000483617	DIAPH3	Q9NSV4	1193 aa		13.73	□□□□□ -0.21
PTPN18-212	ENST00000483617	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN18-212	ENST00000483617	CASP8AP2	Q9UKL3	1982 aa		13.72	□□□□□ -0.21
PTPN18-212	ENST00000483617	REC8	O95072	547 aa		13.72	□□□□□ -0.21
PTPN18-212	ENST00000483617	MAP4K4	O95819	1239 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN18-212	ENST00000483617	TNFAIP1	Q13829	316 aa		13.72	□□□□□ -0.21
PTPN18-212	ENST00000483617	RASA3	Q14644	834 aa		13.72	□□□□□ -0.21
PTPN18-212	ENST00000483617	GRIK5	Q16478	980 aa		13.72	□□□□□ -0.21
PTPN18-212	ENST00000483617	MAP3K11	Q16584	847 aa		13.72	□□□□□ -0.21
PTPN18-212	ENST00000483617	SUPT20HL1	Q3ZLR7	823 aa		13.72	□□□□□ -0.21
PTPN18-212	ENST00000483617	LDLRAD1	Q5T700	205 aa		13.72	□□□□□ -0.21
PTPN18-212	ENST00000483617	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN18-212	ENST00000483617	ZNF70	Q9UC06	446 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN18-212	ENST00000483617	FZD1	Q9UP38	647 aa		13.72	□□□□□ -0.21
PTPN18-212	ENST00000483617	MYH13	Q9UKX3	1938 aa		13.71	□□□□□ -0.21
PTPN18-212	ENST00000483617	PPP1R12B	O60237	982 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN18-212	ENST00000483617	ADORA1	P30542	326 aa		13.71	□□□□□ -0.21
PTPN18-212	ENST00000483617	HDLBP	Q00341	1268 aa	Known RBP	13.71	□□□□□ -0.21
PTPN18-212	ENST00000483617	MKRN3	Q13064	507 aa	Known RBP	13.71	□□□□□ -0.21
PTPN18-212	ENST00000483617	TTF1	Q15361	905 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN18-212	ENST00000483617	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN18-212	ENST00000483617	TDRD3	Q9H7E2	651 aa	Known RBP	13.71	□□□□□ -0.21
PTPN18-212	ENST00000483617	PAG1	Q9NWQ8	432 aa		13.71	□□□□□ -0.21
PTPN18-212	ENST00000483617	MAST3	O60307	1309 aa		13.7	□□□□□ -0.22
PTPN18-212	ENST00000483617	ANP32A	P39687	249 aa	Known RBP	13.7	□□□□□ -0.22
PTPN18-212	ENST00000483617	MFAP1	P55081	439 aa	Known RBP	13.7	□□□□□ -0.22
PTPN18-212	ENST00000483617	SREBF2	Q12772	1141 aa		13.7	□□□□□ -0.22
PTPN18-212	ENST00000483617	DGKZ	Q13574	1117 aa		13.7	□□□□□ -0.22
PTPN18-212	ENST00000483617	CCDC102B	Q68D86	513 aa		13.7	□□□□□ -0.22
PTPN18-212	ENST00000483617	KIAA1211	Q6ZU35	1233 aa		13.7	□□□□□ -0.22
PTPN18-212	ENST00000483617	TEKT1	Q969V4	418 aa		13.7	□□□□□ -0.22
PTPN18-212	ENST00000483617	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.7	□□□□□ -0.22	8e-7	■■■■■ 37.5
PTPN18-212	ENST00000483617	MCOLN1	Q9GZU1	580 aa		13.7	□□□□□ -0.22
PTPN18-212	ENST00000483617	SUGT1	Q9Y2Z0	365 aa		13.7	□□□□□ -0.22
PTPN18-212	ENST00000483617	UNCX	A6NJT0	531 aa		13.69	□□□□□ -0.22
PTPN18-212	ENST00000483617	GOLIM4	O00461	696 aa		13.69	□□□□□ -0.22
PTPN18-212	ENST00000483617	CHML	P26374	656 aa		13.69	□□□□□ -0.22
PTPN18-212	ENST00000483617	TM4SF4	P48230	202 aa		13.69	□□□□□ -0.22
PTPN18-212	ENST00000483617	SPRYD7	Q5W111	196 aa		13.69	□□□□□ -0.22
PTPN18-212	ENST00000483617	ZSCAN25	Q6NSZ9	544 aa		13.69	□□□□□ -0.22
PTPN18-212	ENST00000483617	RFX7	Q2KHR2	1363 aa		13.69	□□□□□ -0.22
PTPN18-212	ENST00000483617	LAMB1	P07942	1786 aa		13.68	□□□□□ -0.22
PTPN18-212	ENST00000483617	TCP10L2	B9ZVM9	353 aa		13.68	□□□□□ -0.22
PTPN18-212	ENST00000483617	SEMA3E	O15041	775 aa		13.68	□□□□□ -0.22
PTPN18-212	ENST00000483617	ARID4A	P29374	1257 aa	Predicted RBP	13.68	□□□□□ -0.22
PTPN18-212	ENST00000483617	IREB2	P48200	963 aa	Known RBP	13.68	□□□□□ -0.22
PTPN18-212	ENST00000483617	TNNI2	P48788	182 aa		13.68	□□□□□ -0.22
PTPN18-212	ENST00000483617	KBTBD3	Q8NAB2	608 aa		13.68	□□□□□ -0.22
PTPN18-212	ENST00000483617	WDR66	Q8TBY9	1149 aa		13.68	□□□□□ -0.22
PTPN18-212	ENST00000483617	CLMN	Q96JQ2	1002 aa		13.68	□□□□□ -0.22
PTPN18-212	ENST00000483617	ZDHHC15	Q96MV8	337 aa		13.68	□□□□□ -0.22
PTPN18-212	ENST00000483617	TEPSIN	Q96N21	525 aa		13.68	□□□□□ -0.22
PTPN18-212	ENST00000483617	RBM19	Q9Y4C8	960 aa	Known RBP	13.68	□□□□□ -0.22
PTPN18-212	ENST00000483617	OTOF	Q9HC10	1997 aa		13.68	□□□□□ -0.22
PTPN18-212	ENST00000483617	USP2	O75604	605 aa	Predicted RBP	13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	ZFY	P08048	801 aa	Predicted RBP	13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	ZBTB48	P10074	688 aa	Predicted RBP	13.67	□□□□□ -0.22
PTPN18-212	ENST00000483617	MCC	P23508	829 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms