RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 NME9Q86XW9 330 aa9.65□□□□□ -0.86
SNX13-208ENST00000482558 TPCN2Q8NHX9 752 aa9.65□□□□□ -0.86
SNX13-208ENST00000482558 KLF15Q9UIH9 416 aa9.65□□□□□ -0.86
SNX13-208ENST00000482558 NRKQ7Z2Y5 1582 aa9.65□□□□□ -0.86
SNX13-208ENST00000482558 OVOS2A0A0J9YW53 1432 aa9.65□□□□□ -0.87
SNX13-208ENST00000482558 OVOS2Q6IE36 1432 aa9.65□□□□□ -0.87
SNX13-208ENST00000482558 PRR36Q9H6K5 1346 aa9.64□□□□□ -0.87
SNX13-208ENST00000482558 CLSTN1O94985 981 aa9.64□□□□□ -0.87
SNX13-208ENST00000482558 PLA2G4AP47712 749 aa9.64□□□□□ -0.87
SNX13-208ENST00000482558 TNP2Q05952 138 aa9.64□□□□□ -0.87
SNX13-208ENST00000482558 DPH6Q7L8W6 267 aa9.64□□□□□ -0.87
SNX13-208ENST00000482558 NOP9Q86U38 636 aaKnown RBP9.64□□□□□ -0.87
SNX13-208ENST00000482558 FCHSD1Q86WN1 690 aa9.64□□□□□ -0.87
SNX13-208ENST00000482558 TICAM2Q86XR7 235 aa9.64□□□□□ -0.87
SNX13-208ENST00000482558 PANK1Q8TE04 598 aa9.64□□□□□ -0.87
SNX13-208ENST00000482558 TRIM11Q96F44 468 aa9.64□□□□□ -0.87
SNX13-208ENST00000482558 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.64□□□□□ -0.87
SNX13-208ENST00000482558 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.64□□□□□ -0.87
SNX13-208ENST00000482558 SSH2Q76I76 1423 aa9.64□□□□□ -0.87
SNX13-208ENST00000482558 NALCNQ8IZF0 1738 aa9.63□□□□□ -0.87
SNX13-208ENST00000482558 RECKO95980 971 aa9.63□□□□□ -0.87
SNX13-208ENST00000482558 MAPTP10636 758 aaKnown RBP9.63□□□□□ -0.87
SNX13-208ENST00000482558 HDAC1Q13547 482 aaPredicted RBP9.63□□□□□ -0.87
SNX13-208ENST00000482558 CCDC102BQ68D86 513 aa9.63□□□□□ -0.87
SNX13-208ENST00000482558 NIFKQ9BYG3 293 aaKnown RBP9.63□□□□□ -0.87
SNX13-208ENST00000482558 PCDHGA11Q9Y5H2 935 aa9.63□□□□□ -0.87
SNX13-208ENST00000482558 PTPRUQ92729 1446 aa9.63□□□□□ -0.87
SNX13-208ENST00000482558 XRN1Q8IZH2 1706 aaKnown RBP9.62□□□□□ -0.87
SNX13-208ENST00000482558 ZNF853P0CG23 659 aa9.62□□□□□ -0.87
SNX13-208ENST00000482558 SEC13P55735 322 aa9.62□□□□□ -0.87
SNX13-208ENST00000482558 ZNF468Q5VIY5 522 aaPredicted RBP9.62□□□□□ -0.87
SNX13-208ENST00000482558 ANKLE2Q86XL3 938 aa9.62□□□□□ -0.87
SNX13-208ENST00000482558 SSH1Q8WYL5 1049 aa9.62□□□□□ -0.87
SNX13-208ENST00000482558 PLVAPQ9BX97 442 aa9.62□□□□□ -0.87
SNX13-208ENST00000482558 BIN2Q9UBW5 565 aaPredicted RBP9.62□□□□□ -0.87
SNX13-208ENST00000482558 CEP170BQ9Y4F5 1589 aaPredicted RBP9.62□□□□□ -0.87
SNX13-208ENST00000482558 ARHGEF10O15013 1369 aa9.62□□□□□ -0.87
SNX13-208ENST00000482558 SPDYE3A6NKU9 549 aa9.61□□□□□ -0.87
SNX13-208ENST00000482558 HTATSF1O43719 755 aaKnown RBP9.61□□□□□ -0.87
SNX13-208ENST00000482558 SSFA2P28290 1259 aa9.61□□□□□ -0.87
SNX13-208ENST00000482558 ERCC5P28715 1186 aaPredicted RBP9.61□□□□□ -0.87
SNX13-208ENST00000482558 SWI5Q1ZZU3 235 aa9.61□□□□□ -0.87
SNX13-208ENST00000482558 RSPO4Q2I0M5 234 aaPredicted RBP9.61□□□□□ -0.87
SNX13-208ENST00000482558 TSR2Q969E8 191 aaKnown RBP9.61□□□□□ -0.87
SNX13-208ENST00000482558 HCN2Q9UL51 889 aa9.61□□□□□ -0.87
SNX13-208ENST00000482558 BRPF3Q9ULD4 1205 aa9.61□□□□□ -0.87
SNX13-208ENST00000482558 TMA7Q9Y2S6 64 aaKnown RBP9.61□□□□□ -0.87
SNX13-208ENST00000482558 SBNO1A3KN83 1393 aa9.61□□□□□ -0.87
SNX13-208ENST00000482558 FLT4P35916 1363 aa9.61□□□□□ -0.87
SNX13-208ENST00000482558 SOS1Q07889 1333 aaPredicted RBP9.6□□□□□ -0.87
SNX13-208ENST00000482558 ZBTB7BO15156 539 aaPredicted RBP9.6□□□□□ -0.87
SNX13-208ENST00000482558 FAM157BP0CG42 384 aa9.6□□□□□ -0.87
SNX13-208ENST00000482558 TRIM27P14373 513 aa9.6□□□□□ -0.87
SNX13-208ENST00000482558 CD33P20138 364 aa9.6□□□□□ -0.87
SNX13-208ENST00000482558 CEBPAP49715 358 aaPredicted RBP9.6□□□□□ -0.87
SNX13-208ENST00000482558 NGDNQ8NEJ9 315 aaKnown RBP9.6□□□□□ -0.87
SNX13-208ENST00000482558 SLC26A8Q96RN1 970 aa9.6□□□□□ -0.87
SNX13-208ENST00000482558 API5Q9BZZ5 524 aaKnown RBP9.6□□□□□ -0.87
SNX13-208ENST00000482558 UPF2Q9HAU5 1272 aaKnown RBP9.6□□□□□ -0.87
SNX13-208ENST00000482558 SETD1BQ9UPS6 1966 aaKnown RBP9.6□□□□□ -0.87
SNX13-208ENST00000482558 ZNF142P52746 1687 aaPredicted RBP9.6□□□□□ -0.87
SNX13-208ENST00000482558 KIAA0232Q92628 1395 aa9.6□□□□□ -0.87
SNX13-208ENST00000482558 USP54Q70EL1 1684 aa9.59□□□□□ -0.87
SNX13-208ENST00000482558 A0A1W2PNR3 127 aa9.59□□□□□ -0.87
SNX13-208ENST00000482558 DCDC2BA2VCK2 349 aa9.59□□□□□ -0.87
SNX13-208ENST00000482558 SFI1A8K8P3 1242 aa9.59□□□□□ -0.87
SNX13-208ENST00000482558 IGHDP01880 384 aa9.59□□□□□ -0.87
SNX13-208ENST00000482558 INHAP05111 366 aa9.59□□□□□ -0.87
SNX13-208ENST00000482558 C8orf34Q49A92 452 aa9.59□□□□□ -0.87
SNX13-208ENST00000482558 NKAPLQ5M9Q1 402 aa9.59□□□□□ -0.87
SNX13-208ENST00000482558 ZNF662Q6ZS27 426 aa9.59□□□□□ -0.87
SNX13-208ENST00000482558 MICAL1Q8TDZ2 1067 aa9.59□□□□□ -0.87
SNX13-208ENST00000482558 ZDHHC3Q9NYG2 299 aa9.59□□□□□ -0.87
SNX13-208ENST00000482558 NOB1Q9ULX3 412 aaKnown RBP9.59□□□□□ -0.87
SNX13-208ENST00000482558 VAMP4O75379 141 aa9.58□□□□□ -0.88
SNX13-208ENST00000482558 DKK1O94907 266 aa9.58□□□□□ -0.88
SNX13-208ENST00000482558 STAU1O95793 577 aaKnown RBP9.58□□□□□ -0.88
SNX13-208ENST00000482558 HMOX1P09601 288 aa9.58□□□□□ -0.88
SNX13-208ENST00000482558 RLBP1P12271 317 aa9.58□□□□□ -0.88
SNX13-208ENST00000482558 SCNN1DP51172 638 aa9.58□□□□□ -0.88
SNX13-208ENST00000482558 LAMC2Q13753 1193 aa9.58□□□□□ -0.88
SNX13-208ENST00000482558 EIF4A2Q14240 407 aaKnown RBP9.58□□□□□ -0.88
SNX13-208ENST00000482558 RRS1Q15050 365 aaKnown RBP9.58□□□□□ -0.88
SNX13-208ENST00000482558 SAMD5Q5TGI4 173 aa9.58□□□□□ -0.88
SNX13-208ENST00000482558 ITPRIPQ8IWB1 547 aa9.58□□□□□ -0.88
SNX13-208ENST00000482558 GAS2L2Q8NHY3 880 aa9.58□□□□□ -0.88
SNX13-208ENST00000482558 CLP1Q92989 425 aaKnown RBP9.58□□□□□ -0.88
SNX13-208ENST00000482558 AIDAQ96BJ3 306 aa9.58□□□□□ -0.88
SNX13-208ENST00000482558 PHACTR3Q96KR7 559 aa9.58□□□□□ -0.88
SNX13-208ENST00000482558 BABAM1Q9NWV8 329 aa9.58□□□□□ -0.88
SNX13-208ENST00000482558 RTL1A6NKG5 1358 aa9.58□□□□□ -0.88
SNX13-208ENST00000482558 KHNYNO15037 678 aaKnown RBP9.57□□□□□ -0.88
SNX13-208ENST00000482558 RGS3P49796 1198 aa9.57□□□□□ -0.88
SNX13-208ENST00000482558 SMTNP53814 917 aa9.57□□□□□ -0.88
SNX13-208ENST00000482558 TSNAXIP1Q2TAA8 658 aa9.57□□□□□ -0.88
SNX13-208ENST00000482558 PRRT3Q5FWE3 981 aa9.57□□□□□ -0.88
SNX13-208ENST00000482558 ARSJQ5FYB0 599 aaPredicted RBP9.57□□□□□ -0.88
SNX13-208ENST00000482558 ZNF526Q8TF50 670 aaPredicted RBP9.57□□□□□ -0.88
SNX13-208ENST00000482558 GCC1Q96CN9 775 aa9.57□□□□□ -0.88
SNX13-208ENST00000482558 ZBTB40Q9NUA8 1239 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms